KEGG   Lagopus muta (rock ptarmigan): 125696199
Entry
125696199         CDS       T09141                                 
Symbol
XNDC1N
Name
(RefSeq) protein XNDC1N isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
lmut  Lagopus muta (rock ptarmigan)
Pathway
lmut03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:lmut00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    125696199 (XNDC1N)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lmut03400]
    125696199 (XNDC1N)
DNA repair and recombination proteins [BR:lmut03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     125696199 (XNDC1N)
SSDB
Motif
Pfam: XRCC1_N RNF220
Other DBs
NCBI-GeneID: 125696199
NCBI-ProteinID: XP_048807556
LinkDB
Position
1:192333436..192336967
AA seq 449 aa
MRGGLEYGRKPEPEAGLRVQWEGPSGNRKREEDGVFGDAWDGAGTGTPTHCCFSLPAPQA
DPAGRHQMAPVKISHIVSFSSQDPRYPVENLLSPDGRRPWLSCPQERSRQLRVELQLERA
VPIGYIDVGNWGCAFLQIEVGRSSWPLDRPYLTLVPSVTLMTPADSKLDRNRCGVRMFKE
ADFLELAAGQKWDRLRLTCSQPFRHRGQFGLCFVRVRTLLEPELCHPAAEDAEIVGSPQR
SNPASLCRIPSAEARLSSQEEEQLKSSLQQLEPSAASHAWSPARLSRPARMVLSAAQSRA
VRPPPRIIASHPGSSAEQGQPAARGAALEVPAAPKRAHRQSGSRQRAGRAVGRSPQPLTR
NPGLGKRARTQGRNASRGESSGEEMALCPICSGSFSTALLPAHASRCGEEESDPEVELLS
SASSPVLCPICGLCFSSAEVEQHCSTCGE
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgcggggagggcttgagtatgggcggaaaccggaaccggaagctggccttcgtgtccaa
tgggagggcccgagcggaaacaggaagcgggaagaggacggagtctttggggatgcctgg
gacggggccggaaccggaactcccacccactgctgcttttcccttccagccccacaagct
gaccctgcaggacggcaccagatggcaccggtgaagatcagccacatcgtgtccttctcc
tcccaggacccccggtacccagtggagaacctcctgtcccccgatggccgtcggccctgg
ctcagctgcccccaggagcgcagccggcagcttagggtggagctacagctggagagagcc
gtccccatcggctacatcgacgtcgggaactggggctgcgccttcctgcagatcgaggtg
ggtcgctcctcgtggcctcttgaccgcccctacctcaccctggtgcccagcgtcacgctg
atgacaccggccgactccaagctggaccgcaaccgctgcggcgtccgcatgtttaaagaa
gcagatttcctggagctggcagcggggcagaagtgggaccgcctgcggctcacctgcagc
caacccttccgtcaccgcgggcagtttgggctctgcttcgtccgcgtgcgcacattgctg
gagcccgagctgtgccaccccgcagcggaggacgctgagatcgtgggcagcccccagcgc
tccaaccctgcctccttgtgccggattccctctgcagaagcgcgcctgagctcccaggag
gaagagcagctgaagagcagcttgcagcagctggagcccagtgctgcatcccatgcctgg
agcccagcacgtctcagccgcccggcacgcatggtgctgtcagcagcgcagagccgtgcc
gtgaggcctccaccccgaattattgccagccacccggggagcagcgcagagcagggacag
cctgcagcacggggtgcagcattggaagtcccagcagcccccaagcgcgcccacaggcag
tcgggcagcaggcagagagctggcagagctgtgggcaggtcccctcagcctctcaccagg
aatcctgggctaggaaagagagcgagaacgcagggccgcaacgcgagcagaggggagagc
agcggtgaggagatggctctgtgccctatttgctcaggttccttcagcacagcgctgctc
cccgctcacgcctcccgctgcggtgaggaagaatccgaccccgaggtggagctgctttcc
tctgccagcagcccggtgctgtgccccatctgcgggctctgcttcagctcagcagaggtg
gagcagcactgcagcacctgtggggagtga

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