Lagopus muta (rock ptarmigan): 125696234
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Entry
125696234 CDS
T09141
Symbol
SNX13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lmut04990
]
125696234 (SNX13)
Domain-containing proteins not elsewhere classified [BR:
lmut04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
125696234 (SNX13)
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Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
BLOC1_2
Motif
Other DBs
NCBI-GeneID:
125696234
NCBI-ProteinID:
XP_048807643
LinkDB
All DBs
Position
7:complement(28690818..28753005)
Genome browser
AA seq
969 aa
AA seq
DB search
MTTKKTSLSIWGWGSLGVVLFLITFGPFAIFYFAFYILCFVGGGFVVTLLFGKSNSEKYL
EQCEHSFLPCTSVGIPKCIEEMKREARPIKIDRRLTGANIIDEPLQQVIQFSLRDYVQYW
YYTLSDDESFLLEIRQALQYALVQFSARSKETDWQPYFTTKLVDDFGTHLRVFRKAQQRI
AEKGDQMKDQAEELVDTFFEVEVEMEKEVCRDLVCTSPKDEEGFLRDLCEVLLYILLPPG
DFQNKIMRYFVREILSRGILLPLINQLSDPDYINQYVIWMIRDSNCNYEAFMNIIKLSDN
IGELEAVKDKASEELQYLRSLDTAGDDINTIKNQINSLLYVIKVCDSRIQRLQSGKEIDT
VKLAANFGKLCTVPLDHILVDNVALQFFMDYMQQTGGQAHLFFWMTVEGYRVTAQQQLEV
LQSRQRDGKHQTNQTKGLLRAAAVGVYEQYLSEKASPRVNIDDNLVAKLAETLNHEDPTP
EIFDDIQRKVYELMLRDERFYPSFKQNVLYVRMLAELDMLKDPSFRGSDDGEGESFNGSP
TSSINLSLDDLSNVPSDETVQLHAYISDTVYADYDPYAVAGVCNDHGKTYALYAITVHRR
NANSEETWKTYRRYSDFHDFHMRITEQFENLANILKLPGKKTFNNMDREFLEKRKKDLNA
YLQLLLNPEMMKASPALAHYVYDFLENKAYSKGKGDFARKMDTFVNPLRNSMRNVSNAVK
SLPDSLAEGMTKMSDNMGKMSERLGQDIKQSFFKVPPLIQKTYSDPDHCRVAATIDDSVD
DNIPLRVMLLLMDEVFDLKERNQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDWMTSPE
QVADAVKRFRDAFWPNGILAETVPRRDKAIRMRTRVAGKTKLLEIMPDELKHIIGAETTR
KGILRVFEMFQHTQLNKRMVYVFLERFLETLFPQNKFHELFNKLHSRSKQMQRYKQRLHS
TQAPSLQKR
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgacaactaaaaagaccagtctttccatatggggatggggaagtcttggtgttgtgctt
ttcctaataacctttggaccctttgctatattttactttgcgttttatatcctctgcttt
gtgggtgggggttttgtggttactcttttatttggaaaaagcaactcagaaaagtacctt
gagcagtgtgaacattcatttcttccttgtacatcagttggtatccctaagtgcatagaa
gaaatgaaacgtgaagccagacctattaagattgacagaagattgacaggtgcaaatata
attgatgagcctttgcaacaggtgatccagttttccctgagagactatgtgcagtactgg
tattacacactaagcgatgatgaatcgtttctcctggaaatcaggcaagctcttcagtat
gcacttgttcagttttctgccaggtcaaaggaaacagactggcagccttacttcactaca
aaacttgttgatgacttcggcactcatcttcgagttttcagaaaagctcagcaaagaata
gcagagaaaggtgatcagatgaaagaccaagctgaggaacttgtagatacattctttgag
gttgaagttgaaatggaaaaagaagtctgtcgtgacctagtctgcacttctcccaaagat
gaagaaggattcctaagggatctgtgtgaggtcttactgtatatattgctacctcctgga
gacttccagaacaagatcatgcgatactttgtcagggaaatcctctcccgaggaattctt
cttccattaataaaccaactcagtgatcctgattatattaatcagtatgtcatatggatg
attcgtgattccaactgtaactatgaggcctttatgaatattattaaattaagtgataat
ataggagagttggaagcagtcaaagataaagcaagcgaagaactgcaatatcttcgatct
ctagatacagcaggagatgatatcaacactataaaaaatcaaataaacagtttattatat
gttattaaagtatgtgattcaagaattcagaggttgcagtcaggaaaagaaatagatact
gtgaaactggcagcaaactttggaaaactttgcacagtccctctggaccatatcctggta
gacaatgttgcactacagttttttatggattacatgcagcagactggtggccaagcacat
ctgtttttctggatgacagtggaaggatacagggttacagcacagcaacagctggaggta
cttcaaagccggcaaagagatggaaaacatcagactaatcagaccaagggtctattaaga
gcagctgcagttggagtttatgagcaatatttatcagaaaaggcatctccaagagttaat
attgatgacaacttggtagcaaaactggcagaaacactgaaccatgaggatccaacacct
gaaatcttcgatgacattcaaagaaaggtgtatgaattgatgctgcgagatgaaagattc
tacccttcgttcaaacagaacgtattgtatgtccgcatgttagctgagctagatatgctg
aaggatcccagtttccgaggatcagatgatggtgagggagaatcttttaatgggtctcct
actagtagcataaatctgtccttagatgacctttcaaatgtcccttctgatgaaacagtt
caactccatgcatatatctcggatactgtatatgctgactatgacccatatgctgtggca
ggagtgtgtaatgaccatggcaagacgtacgcgctgtatgctatcacagtccatcggaga
aatgcaaacagcgaggaaacatggaagacatatcggcgctacagtgacttccatgacttt
cacatgaggatcactgagcagtttgaaaatctggcaaacatactgaaacttcctggcaaa
aagacatttaacaatatggacagagaattcttggagaagaggaaaaaagatttaaatgca
tatttgcagctcctgttaaatcctgaaatgatgaaagcttctccagctctcgcccattat
gtgtacgacttcttggaaaataaggcctacagcaaaggcaagggggattttgcacggaag
atggacacatttgtaaacccactgcgtaactctatgagaaatgtatcaaatgcagtcaag
tctctccctgacagcctcgcagagggaatgactaaaatgtcagacaacatgggtaaaatg
tcagagagactgggacaagacataaagcaatcatttttcaaggtgcctcctttgatccag
aaaacctattcagatcctgaccattgccgtgttgcagcaacaattgatgacagtgtggat
gacaatattcctcttcgagtaatgctcctcctaatggatgaagtctttgatttaaaggaa
agaaatcaatggttaagaagaaatataaagaatcttcttcaacagcttattagagcaaca
tatggtgacacaattaataggaaaatagttgatcatgttgactggatgacatctcctgaa
caagtagcagatgctgtgaaacgcttcagagatgccttttggcccaatggcattttagca
gagaccgttccacggagagacaaagctattagaatgagaacaagagtagcagggaagacc
aaattgctagagataatgccagatgaattgaagcacatcataggtgctgagacaacacga
aaaggtattcttcgggtctttgagatgttccagcatactcaactgaataagagaatggta
tatgtctttctggagagatttctagaaaccttgtttccacaaaataagttccatgagctc
ttcaacaaactgcattcacggtcaaagcagatgcagaggtataaacagagactacattct
actcaagcgccttccttgcagaaaaggtga
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