Lagopus muta (rock ptarmigan): 125696262
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Entry
125696262 CDS
T09141
Symbol
GARS1
Name
(RefSeq) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
125696262 (GARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lmut01007
]
125696262 (GARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lmut03016
]
125696262 (GARS1)
03029 Mitochondrial biogenesis [BR:
lmut03029
]
125696262 (GARS1)
Enzymes [BR:
lmut01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
125696262 (GARS1)
Amino acid related enzymes [BR:
lmut01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
125696262 (GARS1)
Transfer RNA biogenesis [BR:
lmut03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
125696262 (GARS1)
Mitochondrial biogenesis [BR:
lmut03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
125696262 (GARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
WHEP-TRS
tRNA-synt_2b
OS-D
EcoRII-C
DUF5915
Motif
Other DBs
NCBI-GeneID:
125696262
NCBI-ProteinID:
XP_048807671
LinkDB
All DBs
Position
7:complement(4484065..4505111)
Genome browser
AA seq
725 aa
AA seq
DB search
MPLLPPRSALPALLRLLSRLAGPLCRQSAPPSAPLPAATLMDGPQAEALLAPLRQAVRHQ
GELVRKLKEEKAPQVDIDRAVAELKARKRVLEAKELALQPKDDIVDRVKMEDTLKRRFFY
DQAFSIYGGVSGLYDFGPVGCALKNNIIQAWRQHFIQEEQILEIDCTMLTPEPVLKTSGH
VDKFADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCTAEKKAEMENVLTQLDNYGQQEL
ADLFVNYNVKSPITGNDLSPPVSFNLMFKTSIGPGGNMPGYLRPETAQGIFLNFKRLLEF
NQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFVDPSEKNHPKFQSVADLNIL
LYSSKAQLSGQSAHLMRLGDAVQQGVINNSVLGYFIGRIYLFLTKVGVSPDKLRFRQHME
NEMAHYACDCWDAESKTSYGWIEIVGCADRSCYDLSCHARATKVPLIAEKLLKEPKTVNI
VQFEANKGAIGKAYKKDAKVVMEYLSMCDECYVTEMEQLLNDKGEFTVETEGKTFTLTKD
MVTVKRFQKTLHVEEIVPNVIEPSFGIGRIMYTVFEHTFRIREGDEQRTFFSFPAVVAPF
KCSVLPLSQNQEFMPFVKELSEALTRNGISHKVDDSSGSIGRRYARTDEVGVAFGITIDF
DTVNRTPHTATLRDRDSMRQIRAEVSELPAIIRDLANGYLTWADVEAKYPQFEGQETGKK
DTIEE
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgctgccgccccgtagcgctctgcccgccctactgcgcctcctcagccgcctc
gccggcccgctctgccgccagtccgctccgccttccgctcctctcccggccgcgaccctc
atggacggcccgcaagccgaggcgctgctcgcgccgctgcggcaggcggtgcggcatcag
ggagaactggtaaggaagctgaaggaagagaaagctccccaggtggatatagacagagct
gtagcagagctcaaagctcggaagagggtcctagaagcaaaggagttggccttacagccc
aaagatgacatcgtggacagagttaaaatggaagacactctgaaaaggaggtttttctat
gatcaagccttttctatttatggaggtgtcagtggcctgtatgactttgggcctgtcgga
tgtgctttgaagaacaacatcatccaggcatggagacagcactttatacaggaggagcaa
atcctggagatagactgtaccatgctcacaccagagccagttttgaagacttctggccat
gtagacaagtttgctgactttatggtgaaagatgtgaaaaatggggaatgttttcgtgct
gatcatctcttaaaagctcacctgcaaaagcttatgtctgacaagaagtgcacagcagag
aaaaaggcagaaatggaaaatgttctgacacagttggacaactatggccagcaagagctt
gcagatctctttgtgaactacaacgtgaagtcacctatcactgggaatgacctttcccct
cctgtttctttcaatctgatgttcaagacctccattgggcccggaggaaacatgcctggc
tatctgaggccagaaacagcacagggaatattcctcaacttcaaacgtcttctcgagttc
aaccaaggcaagctcccttttgctgctgctcagattggaaactccttcagaaatgagatc
tcgccccgatccggccttatcagagtgagggaattcaccatggcagaaattgagcacttt
gtggatcccagtgagaaaaatcatcccaagtttcagagtgtggcagatctcaacatcctc
ctgtattcttccaaggcccagctcagcgggcagtctgcccatttaatgcggctgggagat
gctgttcaacagggcgtgatcaataactccgttcttggttacttcattggtagaatctac
ctcttccttacaaaggttggtgtatcccctgacaagctgcgcttccgacagcacatggag
aatgagatggctcactatgcctgtgactgctgggatgcagagtccaaaacatcgtatggt
tggattgagattgtaggctgcgctgatcgttcctgctatgacctctcctgccatgctcga
gccaccaaagttcctcttatagctgagaagcttctcaaagaacctaaaacagtcaacatt
gttcagtttgaggcaaacaagggagccattggcaaagcttacaagaaggacgcgaaggtg
gtgatggaatacctttccatgtgtgatgagtgctacgtcactgagatggagcagctgctg
aacgacaaaggggaattcactgttgaaaccgaagggaaaacttttacattaacaaaggac
atggttactgtgaagagatttcagaaaacgttacatgtggaagaaatcgtcccaaatgta
attgaaccctcatttggtatcgggagaatcatgtacacagtatttgagcacacattccgc
attcgggaaggagacgagcagagaacgttcttcagcttcccagctgttgtagcaccattc
aagtgctccgttcttcctctcagccagaatcaggaattcatgccttttgtcaaggaatta
tctgaagcactcaccaggaatggcatttctcacaaggtggatgattcctccggctccatc
ggccgacgctacgccaggactgatgaggttggcgtggcctttgggatcacaattgacttc
gacaccgtaaaccgaacgcctcacaccgccacgctgagagaccgcgactcgatgcgccag
atccgagctgaggtctctgaacttcctgccataattcgtgacctggcgaacggttatcta
acttgggctgacgtggaagccaagtatccacagtttgagggacaagagactggcaaaaag
gacacaatagaggaataa
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