KEGG   Lagopus muta (rock ptarmigan): 125696413
Entry
125696413         CDS       T09141                                 
Symbol
RBBP7
Name
(RefSeq) histone-binding protein RBBP7
  KO
K11659  histone-binding protein RBBP7
Organism
lmut  Lagopus muta (rock ptarmigan)
Pathway
lmut03082  ATP-dependent chromatin remodeling
lmut03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:lmut00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    125696413 (RBBP7)
   03083 Polycomb repressive complex
    125696413 (RBBP7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lmut03036]
    125696413 (RBBP7)
Chromosome and associated proteins [BR:lmut03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    Sin3A-HDAC complex
     125696413 (RBBP7)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     125696413 (RBBP7)
    PRC2.2
     125696413 (RBBP7)
  Chromatin remodeling factors
   NuRD complex
    125696413 (RBBP7)
   NuRF complex
    125696413 (RBBP7)
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz CAF1C_H4-bd WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st EIF3I Beta-prop_WDR75_1st Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_1st WD_LRWD1 WD40_RFWD3 Beta-prop_WDR19_1st ANAPC4_WD40 Beta-prop_DCAF12 eIF2A WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_IFT140_1st MIOS_WD40 Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 125696413
NCBI-ProteinID: XP_048807940
LinkDB
Position
1:120624472..120632710
AA seq 424 aa
MASKEVLEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVTRPEGKDY
ALHWLVLGTHTSDEQNHLVVARVQIPNDDQFDTSQYDSEKGEFGGFGSVTGKIETEIKIN
HEGEVNRARYMPQNPCIIATKTPSADVLVFDYTKHPSKPDPNGECNPDLRLRGHQKEGYG
LSWNSNLKGHLLSASDDHTVCLWDISAAPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESL
FGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD
LRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDG
PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEEPDIAAAELE
GQGT
NT seq 1275 nt   +upstreamnt  +downstreamnt
atggcgagtaaggaagtgctggaggacacggtggaggagcgtgtcatcagtgaggagtac
aagatctggaagaagaacacccccttcttgtacgatctggtgatgacacacgcgctggag
tggcctagcctcaccgtgcagtggctgcctgatgtgaccaggccagagggaaaggattat
gctctacactggctggttttaggaactcacacctctgatgaacagaaccacctggttgtt
gcaagagtccagatacccaatgatgatcagtttgatacctcccagtatgacagtgagaaa
ggagagtttggtgggtttggatctgtgactggcaaaattgaaaccgagattaaaattaac
catgaaggcgaagtgaatcgcgctcgttacatgccacagaacccatgcatcattgctact
aaaactccttctgctgacgtgttggtatttgactacactaaacatccttcaaaaccagac
ccaaatggagagtgtaatccagatcttagattaagagggcaccagaaagaaggctatggt
ttgtcatggaactcaaatttgaaaggacatcttctcagtgcatcagatgatcatactgtg
tgtttatgggatataagcgctgcaccaaaagaaggcaaaattgttgatgcaaaagcaatc
ttcactgggcactctgcagtagtagaagacgtggcatggcatctgcttcatgagtctctg
tttggatctgtggctgacgatcagaagcttatgatctgggacacgagatctaatactaca
tccaagccgagtcattctgttgatgctcatacagctgaggtcaactgtctgtccttcaat
ccatacagcgagttcattttagcaactggttcggctgacaagacagtcgctttatgggac
cttcgaaacttgaaattgaagcttcattcttttgagtctcacaaggatgaaatttttcag
gttcattggtctcctcataatgaaacaatccttgcttcaagtggtactgatcgtcggctt
aatgtgtgggatctaagtaaaattggagaagaacaatctgcagaggatgcagaagatggg
cctcctgaactcctgtttattcatggaggacacactgccaaaatttcagacttcagttgg
aatcctaatgagccttgggtcatctgttctgtatcagaggacaacataatgcagatatgg
caaatggcagaaaacatttacaatgatgaagaaccagatatagcagcagcagaactggaa
ggtcaaggaacgtaa

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