Lagopus muta (rock ptarmigan): 125696430
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Entry
125696430 CDS
T09141
Symbol
TMC2
Name
(RefSeq) transmembrane channel-like protein 2
KO
K21988
transmembrane channel-like protein
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
125696430 (TMC2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lmut02000
]
125696430 (TMC2)
03037 Cilium and associated proteins [BR:
lmut03037
]
125696430 (TMC2)
Transporters [BR:
lmut02000
]
Other transporters
Pores ion channels [TC:
1
]
125696430 (TMC2)
Cilium and associated proteins [BR:
lmut03037
]
Other cilia and associated proteins
Stereociliary proteins
125696430 (TMC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
TRAP_beta
Motif
Other DBs
NCBI-GeneID:
125696430
NCBI-ProteinID:
XP_048808064
LinkDB
All DBs
Position
7:43503810..43533416
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AA seq
925 aa
AA seq
DB search
MGKRKKCKLRDIMEHVGMEIDGQVESDSESEEDEVKDKRSKKQTRREIVRANRLERKKSQ
KNEEENESEEEDDCPPQSRASRRKNHRMKRSDGKKEGEGRERDKKASSKDEKESENKEKK
INKKGKEEENKQKKGRKNSASSNSSNSSDEESLSEEELAMLMEEVEQKKKLISTMRNKPW
RMMKKLSVLREAQAFVEKFEGALGKGKGKKLYAYKMMMAKKWVKFKRDFDNFKTQCIPWE
MKIKEVESHFGSSVASYFIFLRWMYGVNLVLFGLIFGLVIIPEVLMGMPYGSMPRKTVPR
AEQATAMDFSVLWDFEGYIKYSALFYGYYNNQRTIGWLKYRLPMAYFMVGISVFGYSLMV
VIRSMARNANESTADGDDDNFVFSWKMFTSWDYLIGNPETADNKFASITTSFKESIVDEQ
ESNKDENIHLRRFLRVLANVLIICCLCGSGYLIYFVVKRSQTFSKMQNAGWYERNEVEIV
MSLLGMFCPPLFETIATLENYHPRIGLKWQLGRIFALFLGNLYTFLLALMDDVNEKLAEE
DVVKNITRWTLFGHYNSSMENSTATPPPLDPADVPRGPCWETTVGIEIVRLTVSDILVTF
VTILVGDFVRACFVRFMNYCWCWDLEAGFPSYAEFDISGNVLGLVFNQGMIWMGSFYAPG
LVGINVLRLLTSMYFQCWAVMSSNVPHARVFKASKSNNFYMGLLLLILFLSLLPVAYTIM
SLPPSFDCGPFSGKKRMYDVIQETIELDFPLFVAKIFGYVANPGLIIPAILLMVLAIYYL
NAVSEAYQRANAELKKKMQLQREEEKNKRNNKASTNSMMQDLEDLLAPSTKNESSPKQAE
DKKTDSPSQASPAGKQEKAEALNSSPITAGRRPAFIPPPHVLVTRPLTPGTWAPYPQPRQ
PWPGGRPMGPFPGRGRGQPRYVCPV
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaggaagaaatgcaaactgcgggacatcatggaacatgttggaatggagatc
gacggacaagtcgagagtgactcagagagtgaagaagatgaagtaaaggacaagagatcc
aagaaacagacccgcagggaaatagtcagagcaaacagacttgaaaggaaaaagtcacag
aaaaatgaagaagaaaatgagagcgaagaggaagatgattgtcctccacaaagcagagct
tctaggaggaaaaatcaccgaatgaaaagaagtgatgggaaaaaggaaggcgagggaaga
gagagagacaaaaaggcttcttccaaagatgaaaaggagtcagaaaataaggaaaagaaa
ataaacaagaaaggaaaggaggaggagaacaaacagaagaaaggcaggaaaaacagtgcc
tcttccaactcttccaactcttccgatgaggaatcgctgtcagaggaagagcttgcaatg
ctgatggaggaggtggagcaaaagaaaaaactcatctccaccatgagaaacaagccctgg
cgaatgatgaagaagctctctgtgctcagggaggcacaagctttcgttgaaaagtttgag
ggagccctgggaaaagggaaaggcaagaagttgtatgcatataagatgatgatggcaaag
aaatgggtgaaatttaagagagactttgacaactttaaaacccagtgcataccctgggag
atgaagataaaagaagtggagagtcactttggttcctctgttgcttcctatttcatattt
ctgcgatggatgtacggtgtaaatcttgtcctttttggattaatatttggactggttata
attccagaggtcctgatgggaatgccgtacgggagcatgccaagaaaaactgtacctcgg
gctgaacaagcaacagctatggatttttctgttctttgggactttgaggggtacatcaaa
tactcagcactcttttatggctactacaacaaccagcggacaattggctggttaaaatac
aggctgccaatggcatatttcatggttgggatcagcgtgtttggctacagcctgatggtt
gttatcagatcgatggcacgcaatgccaatgaaagcacagcagatggggacgatgacaac
tttgttttcagctggaaaatgttcacgagctgggactacctcattggcaacccagagaca
gcagacaacaagtttgcatccatcaccaccagcttcaaggaatctattgtggatgagcaa
gaaagcaacaaggacgaaaacatccatctgaggaggttcctgcgggtcctggccaacgtc
ctcatcatatgctgcttgtgtggcagcggctacctcatttattttgtggtgaaacgctcc
cagacgttttcaaaaatgcagaatgccggatggtatgaaagaaatgaggttgaaattgtg
atgtccttgctgggtatgttttgccctcccctgtttgaaactattgccacactcgaaaac
taccatccacgcatcggtctgaagtggcagctggggcgcatctttgcccttttcctggga
aacctctacacattccttctggccttgatggatgatgtcaacgaaaaactagctgaagag
gacgttgtgaagaacatcacgcgctggacactgtttggccattataactcatccatggag
aacagcacagctacccctcctcccctcgaccctgcagacgtgcccaggggaccctgctgg
gagacaaccgtcggcattgagattgtaaggctcaccgtgtctgatatcctggtgaccttt
gtaactatcctggtgggagatttcgtccgagcttgcttcgtgagattcatgaattactgt
tggtgctgggacctagaggctggatttccttcctatgcagagtttgacatcagtggcaat
gttttgggtttggtcttcaaccaaggaatgatttggatgggatccttttatgcaccaggg
ctcgtgggtataaacgtgctgcgcttattaacctccatgtattttcagtgctgggctgtc
atgagtagcaatgttcctcatgcacgagtattcaaagcatccaagtctaacaacttttac
atgggactgctgctgttgatcctgttcctcagcctcctgcccgtggcctacaccatcatg
tccctgcctccttccttcgactgcggaccattcagtggaaagaaaaggatgtatgatgtc
attcaagagaccatcgagcttgattttccactttttgttgccaagatcttcggctatgtg
gcaaatccaggactaatcattcccgcaattctgctcatggtcctcgctatttattatcta
aatgctgtgtctgaagcataccagcgcgccaacgcagagttgaagaagaaaatgcaactg
caacgtgaagaagagaaaaacaagaggaacaacaaagccagcactaattccatgatgcaa
gatctggaggatttacttgcaccgagtacaaagaatgaaagctctcccaaacaagcagaa
gacaagaaaacagattctcccagtcaagccagccctgctgggaaacaagaaaaagcagaa
gccctgaacagcagccccataaccgctgggagaagaccagcgttcatcccaccaccacac
gtactggtgacacggccactgacaccaggcacttgggcaccgtaccctcagccaagacag
ccctggccaggaggacgcccaatggggccattccctggaagagggagaggacagccacga
tacgtgtgccctgtctga
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