Lagopus muta (rock ptarmigan): 125696483
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Entry
125696483 CDS
T09141
Symbol
NOD1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1 isoform X1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04621
NOD-like receptor signaling pathway
lmut05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
125696483 (NOD1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
125696483 (NOD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lmut04054
]
125696483 (NOD1)
Pattern recognition receptors [BR:
lmut04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
125696483 (NOD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
LRR_6
CARD
NOD2_WH
LRR_4
SpoU_sub_bind
AAA_16
AAA_22
FumaraseC_C
PIF1
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
125696483
NCBI-ProteinID:
XP_048808165
LinkDB
All DBs
Position
7:40553826..40583408
Genome browser
AA seq
951 aa
AA seq
DB search
MEGHLCANLKTCVGKPLAASPPSCIALLKVYRELLVSKIRHTQCLLDNLINNEYFSTEDA
EIVVQFPTQADKVRKILDLVQSKGEEVSEYFIRVLQKVTDAYYELQPWLDEIGYQPSENI
CSKPVVNTDPVSRYCQKLRYELGRDSKFVMSYAQREEMLLEEIYSNSIMEMVNFTNESLG
EVCQLQALFDDAVGVINEDGETIYVFGDAGIGKSILLQKIQSLWAKKQLDVGAKFFFHFR
CRMFSCFKEDEAVCLKDLLFRYNCYPDQDPTEVFHHILQFPHTVLFTFDGFDEIYSNFDL
SSVPEMCSPNEPVHPLVLLVSLLRGKLLKGSKKILTARTGTEIQRNIIRKKVLLRGFSSN
NLKEYTALVFKDAGQRTLILNQLEANPNLCSLCSVPLFCWIIFKCYEHFHSMFDSHELPD
CSVTLTDVFLLMIEVHLNRSLKTSLLKNNVRSQAEVFKSRKETLLALGKIAYKGMRNSIF
VFEQEEVSSANISEEDLQLGFLRTVKGYSGCDDQSTYEFLHLTLQSFFTALYLVMEERVG
IKELLQFFSECSSAETAQHTCFHIPWLKKPLTGEDPFRNNEHFHFTNLFLCGLLSRSKEK
LFKQLVLPAVIRKKRKTLITYLGGSMKSHLKGVTRSRLLKYNQVQVQPNFVWMLRCLYET
QNETVGKLAAKRMHANYIKLTYCNAYSADCSAISFVVHHFQKRLALDLDNNNINDYGVKQ
LLPCFSKLAVIRLSVNQITDHGARILYEELSKYQIVSYLGLYNNQITDIGAKYVAKLIEE
CSSLEYVKIGANKITSEGGKCLAQAIQKNTMMFEIGMWGNQVGDEGAKAFAEALRNHPRL
TNVSLAFNGITTEGGKSIAEALQHNNSVKIFWLTKNELDDEAAMSFAEMLKINKKLVHLW
LIQNQITAKGVKYLSEALKENTAIKEVCLNGNLISQEEAKAFESEERIICF
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggaaggccacctttgtgctaacttgaagacttgtgtgggaaaacctctggcagccagt
cctccatcctgcattgctttgctgaaggtataccgagagcttctggtcagtaagatccgg
cacacccagtgtttgcttgacaacttgattaacaatgagtacttctccactgaagatgca
gagattgttgtccagtttccaactcaagcagataaggttcgcaaaattctagacttggtt
caaagcaagggagaggaagtttcagaatatttcatccgtgtcctgcagaaagtcactgat
gcttactatgaactccagccttggctggatgaaataggttaccagccttcagagaatatt
tgtagtaaacctgtggtaaatacagatccagttagcaggtattgccaaaaactgagatat
gaactgggacgggactccaaattcgttatgtcgtatgcgcagagggaagagatgctgctg
gaagaaatctactctaacagtattatggagatggtcaattttaccaatgagagcctgggt
gaagtgtgtcaattacaagccctttttgatgatgcagttggggtaataaatgaagatgga
gagactatttatgtctttggcgatgcaggaattggaaaatctatcttactgcaaaagata
caaagtctttgggccaaaaaacagttggatgtaggggcaaagtttttcttccatttccga
tgtaggatgtttagttgctttaaggaagatgaagctgtatgtttgaaagacttactcttc
agatataattgctacccagatcaggaccccacagaggtgttccatcacatcttgcagttc
cctcacacggttcttttcacattcgatggctttgatgagatctattccaactttgatctc
agtagtgttcctgagatgtgttcacccaatgaacccgtccaccctctggtgctgctggta
agccttctcagaggaaagcttcttaagggatccaagaaaattcttacagcacggacagga
actgaaatccaaagaaatatcattagaaagaaagtgttgcttcgtggtttctccagcaat
aacctgaaggaatacactgccttggtttttaaagatgcggggcagcgaacgctgatactg
aaccagctggaagctaatcccaacctctgtagtttgtgttcagtgcctttattctgttgg
attatctttaaatgttatgaacatttccactccatgtttgacagccatgagcttccagac
tgttctgttacattgacagatgtatttttgctcatgattgaagtccatctaaaccggtct
ctgaaaacaagtttgctgaagaacaacgtcaggagccaagcagaggtgttcaaatcaaga
aaggaaactcttctagctttgggtaaaattgcatacaaagggatgaggaactctatcttt
gtctttgagcaagaggaggtctcatcagcgaacatctctgaagaagatttgcagttgggt
tttctcaggacagttaaaggttacagtggctgtgacgatcaatccacttatgagttcttg
cacttaacccttcagtcttttttcaccgctttgtacctagttatggaagagagagtgggg
attaaggagttacttcagtttttcagtgaatgctcctctgctgagactgcccagcatact
tgctttcacattccttggctgaagaaaccactcacaggggaggatcctttccgaaacaat
gaacacttccattttaccaatcttttcctttgtggcctgctttccagatccaaggagaag
ctcttcaaacaattagttttgcctgcagtcattagaaagaagaggaagacactcatcaca
taccttggggggagcatgaaatcccatctgaagggtgtcactcggtccaggcttctaaag
tacaatcaggtgcaggttcagccaaactttgtttggatgctgaggtgtctttatgagact
caaaatgagacagtgggaaagctggctgcgaaacgcatgcatgccaattacatcaagctt
acatactgcaatgcctactctgctgactgcagtgctatttcctttgtcgtgcatcacttt
cagaagcgcttggctctggatttggacaacaacaacatcaatgactatggggtgaaacag
ctgctaccgtgtttcagcaagcttgcagtcatcaggctcagtgtaaatcagatcacagat
catggagcaaggatattgtacgaagagctctccaagtaccaaattgtatcttacttgggc
ttatacaacaatcagatcactgacattggagccaaatatgttgcaaaacttattgaagag
tgttcaagccttgaatatgttaaaataggagcaaacaaaataactagtgaaggggggaag
tgccttgcccaggccatccagaagaacacaatgatgtttgaaatcgggatgtggggcaat
caggttggagacgaaggtgcaaaggcatttgcagaggccctgaggaaccatccgaggttg
acaaatgtgagtctcgcatttaacggcatcacaacagagggaggcaaaagcattgctgaa
gctttgcagcacaacaactccgtgaaaatattctggctgacaaaaaatgaactggatgat
gaggcagcaatgagttttgcagagatgctgaagatcaacaagaaactggtgcatttatgg
cttatccagaatcaaattacagccaaaggagtgaagtacctcagcgaagctctcaaggag
aacacagccatcaaagaagtctgtttgaatgggaacctgataagtcaagaagaagccaaa
gcttttgaaagtgaagaacggatcatttgcttctga
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