Lagopus muta (rock ptarmigan): 125696491
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Entry
125696491 CDS
T09141
Symbol
HDAC9
Name
(RefSeq) histone deacetylase 9 isoform X1
KO
K11409
histone deacetylase 9 [EC:
3.5.1.98
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lmut03036
]
125696491 (HDAC9)
Enzymes [BR:
lmut01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
125696491 (HDAC9)
Chromosome and associated proteins [BR:
lmut03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
125696491 (HDAC9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
125696491
NCBI-ProteinID:
XP_048808187
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All DBs
Position
7:28803562..29245466
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AA seq
1100 aa
AA seq
DB search
MLQTIYESESCFSSDGVSGREQLLAQQRMHSMISSVDVKSEVPVGLEPISPLDLRTDLRM
MVPMVDPIMREKQLQQELLLIQQQQQIQKQLLIAEFQKQHENLTRQHQAQLQEHIKLQQE
LLAIKQQQELLEKEQKLEQQRQEQELERHRREQQLPPLRGKERVRERAVASTEVKQKLQE
FLLSKSATKDSPANGKNHSVSRHPKLWYTAAHHTSLDQSSPPLSGASPPYKYTLPGSQDA
KDDFPLRKTASEPNLKVRSRLKQKVTERRSSPLLRRKDGNVVSSFKKRLFEVTESSVSSS
SPGSGPSSPSNGPTSSITESETSVLPSSIQAEHLVSQQRLLIQDESVNLLSLYTSPSLPN
ITLGLPAVQSQISASSSFKEKQKGETQTLRPGVALAGQYGGNIPPSSTHPHVALEGKPNS
SHQALLQHLLLKEQMRQQKLLVTGAVPLHPQSPLAAKERVSPGIRAAHKLPRHRPLNRTQ
SAPLPQSTLAQLVIQQQHQQFLEKQKQYQQQIHMNKMLSKSIEQLKQPGSHLEEAEEELN
GDHSMQEERAPASGASIRAESSSAGEDGRIGQQAGAVKVKEEPPDSDEDTQTQQMESGEQ
AAFVQQEFLAHQRVHQLQIYQAQMATVGMAGLDKHRLVSRTPSSPTDSTLPHPAVDQPSQ
HVYTTGVVYDSLMLKHQCMCGNYANHPEHAGRIQSIWSRLQETGLLNKCERIRGRKASLE
EIQLVHSEHHSLLYGTSPLNRQKLDPRKLLGNVSQKLFSLLPCGGLGVDSDTVWNELHSA
GAARMAVGCVIELAARVASRELKNGFAVVRPPGHHAEESTAMGFCFFNSIAITAKYLRDK
LNIGKILIVDLDVHHGNGTQQAFYADPSILYVSLHRYDEGNFFPGSGAPNEVGSGPGEGF
NINIAWTGGLDPPMGDVEYLTAFRTVIMPAANEFDPEIVLVSAGFDAVEGHDPPLGGYKV
TAKCFGHLTKQLLKLADGRVVLALEGGHDLTAICDASEACINALLGNELEPLPEDIVHQI
PNMNAIASLKKTTEIQSKYWKSVEPYSVPVDCALAESQKREREETETVSAMASLSVDVEQ
CFPQESSRAAGEPMEEEPAL
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagacaatttacgagagtgaatcgtgtttttcctcagatggggtttctggacgt
gaacagctcttggctcagcaaagaatgcacagtatgatcagctcagtggatgtgaagtca
gaggttcctgtgggattagagcctatctcaccattagacttacgaactgatctcaggatg
atggttcccatggtggacccaattatgcgtgaaaagcagctacagcaggagctacttctg
atccagcagcagcagcaaattcagaaacaactgctgattgcagagtttcagaaacagcat
gaaaacctgacccgccagcaccaggcccagctccaggagcacataaagttacaacaggaa
ctcctagccattaaacagcagcaagaacttctcgaaaaagagcagaaactggagcaacag
agacaagagcaggaactggagaggcatcgcagggaacaacagcttcctcccctcagaggc
aaagaaagagtccgagaaagggcagtagccagtacagaagtgaagcaaaaacttcaggag
ttcctgttaagtaaatcagcaacaaaagactctccagcaaatggaaagaatcattccgtg
agccgccaccccaagctctggtacacggctgcccaccatacctcactggatcaaagctct
ccacccctgagtggggcctcgccgccatacaaatacactttaccaggatcacaggatgcc
aaggatgattttccactccgtaaaacagcttcagagcccaatttgaaggtacgctcaagg
ttaaaacaaaaggtaacagaaaggcgaagcagtcctttactgaggaggaaggatggaaat
gttgtcagctcgttcaagaagcgactctttgaggtgacagaatcctcagtcagtagcagc
tcccctggatcaggtcccagttcccctagcaatggtccaaccagcagtataacagaaagt
gaaacctcggttttgccatctagcattcaagctgagcatctggtttcacagcaacgcctt
ttgatacaggatgaatcagtgaacttgttgagtctgtacacgtccccttctttgcccaac
attaccttgggacttccagctgtacaatctcaaatcagcgcttcatcatcattcaaagaa
aagcagaagggagagacccagacactcagaccaggagtggccttggctggacagtatggg
gggaatattcccccatcttcaactcatcctcatgttgctttggagggaaaaccaaacagc
agccaccaggctctcttgcaacatctgttactgaaagaacagatgagacaacagaaactt
cttgtaactggagcggttcctcttcatccccagtctcctttggcagcaaaagaaagagtc
tcacctggcataagagctgcccacaaactgcctcgccacaggcctctgaatcgaacccag
tcagctcctcttcctcagagcactttggcgcagctggtcatccaacagcaacatcagcag
tttttggagaagcagaaacagtaccagcaacagatccacatgaataagatgctctccaaa
tccattgagcagctaaagcagcctggcagccacctggaggaagctgaagaagagctgaat
ggagaccactcgatgcaggaggagcgagctcccgctagtggggccagcattagggctgag
agcagcagtgctggtgaggatggcagaataggacagcaggcgggggctgtgaaggtcaaa
gaggagccaccggacagtgatgaggatactcaaacccagcaaatggaatctggggagcaa
gctgcttttgtgcaacaggagttcctggcgcatcagcgtgtccaccagttgcaaatctac
caggctcagatggctacagttggcatggcgggattagataaacatcggctggtgtccagg
actccatcttcccccactgattccacattacctcacccagccgtggaccagcccagccag
catgtctacacaactggtgttgtgtatgacagcctgatgctgaagcaccagtgtatgtgt
ggcaactacgctaatcaccctgagcatgctggaaggatccaaagcatctggtcaaggctg
caagaaactgggctgctaaacaagtgtgagcgaattcgaggtcgaaaagccagtctggag
gaaatacagctggttcactctgaacatcattcactgctgtatggcaccagccccctgaac
agacagaagctggaccccaggaaactcctaggaaacgtgtctcaaaaactcttttccttg
ctgccttgtggaggacttggggtggacagtgacaccgtttggaacgaactgcactcggcc
ggggcggcacgcatggcagtgggctgcgtcatcgagctggcagcccgcgtggcctccagg
gagctgaagaatggttttgctgttgtaaggcccccaggccatcatgctgaagaatcaaca
gccatggggttctgcttttttaattcgattgcaattactgccaaatacttgagagacaag
ctaaatataggcaagatattgattgtagatctggatgttcaccatggcaacggtacacag
caggctttttatgctgaccccagcatcctgtatgtttccctccatcgctatgatgaaggc
aacttcttccctggcagtggagccccaaatgaggttggaagtggcccaggtgaaggtttt
aatataaatattgcttggacaggtggtttggatcctcccatgggagatgttgaatatctc
acagcattcaggactgtgatcatgccagctgccaatgagtttgatccagagattgtcctg
gtatcagcaggatttgatgccgtggaaggccacgaccctccactgggtggctataaagtc
acagctaaatgttttggtcacctaaccaagcaattgctgaagctagcggacggacgtgtt
gtgctggcactggagggaggacatgaccttactgccatctgtgatgcatctgaagcctgt
ataaatgcccttttaggaaatgagctggagcctctcccggaagatattgtacaccaaatc
cccaatatgaatgcaatagcttctttaaaaaagaccactgaaattcaaagcaagtactgg
aagtcagtggagccatactctgtgccagtggattgtgctctggctgagtctcagaaacga
gagagggaggagacagaaacggtgtctgctatggcctccctttcagtggatgttgagcag
tgctttcctcaggaaagcagcagagctgctggcgagcccatggaagaagagccagccttg
tga
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