Lagopus muta (rock ptarmigan): 125696579
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Entry
125696579 CDS
T09141
Symbol
HSPD1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125696579 (HSPD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmut03019
]
125696579 (HSPD1)
03110 Chaperones and folding catalysts [BR:
lmut03110
]
125696579 (HSPD1)
03029 Mitochondrial biogenesis [BR:
lmut03029
]
125696579 (HSPD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lmut04147
]
125696579 (HSPD1)
Enzymes [BR:
lmut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
125696579 (HSPD1)
Messenger RNA biogenesis [BR:
lmut03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
125696579 (HSPD1)
Chaperones and folding catalysts [BR:
lmut03110
]
Heat shock proteins
HSP60 / Chaperonin
125696579 (HSPD1)
Mitochondrial biogenesis [BR:
lmut03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
125696579 (HSPD1)
Exosome [BR:
lmut04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125696579 (HSPD1)
Exosomal proteins of other body fluids (saliva and urine)
125696579 (HSPD1)
Exosomal proteins of breast cancer cells
125696579 (HSPD1)
Exosomal proteins of colorectal cancer cells
125696579 (HSPD1)
Exosomal proteins of bladder cancer cells
125696579 (HSPD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
125696579
NCBI-ProteinID:
XP_048808331
LinkDB
All DBs
Position
8:26791311..26801127
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AA seq
573 aa
AA seq
DB search
MLRLPAVLRHVRPVSRALAPHLTRAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKAIDLKDKYKNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFEKISKGANPVEIRRGVMLAVDAVIAELKKLSKPVTTPEEIAQVATISANGDQ
EIGNIISDAMKKVGRKGVITVKDGKTLNDELEIIEGMKFDRGYISPYFINTAKGQKCEFQ
DAYVLISEKKISSVQSIVPALEIANSHRKPLVIIAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLKDMAIATGGAVFGEEGLSLNVEDIQPHDFGKVGEVIVTKDDTMLLKG
KGEKAQIEKRIQEIIEQLEVTTSEYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVPGGGCALLRCIPALDALKPANEDQKIGIEIIKRTLKIPAMTIA
KNAGVEGSLIVEKILQSPSEVGYDAMLGDFVNMVEKGIIDPTKVVRTALMDAAGVASLLS
TAEAVVTEVPKEEKEPAMGGMGGMGGGMGGGMF
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgctccgcttgcccgcagtgctccgtcacgtcaggccggtgtccagagcgctcgccccg
cacctgacgcgggcgtatgcgaaggatgtgaagttcggtgcggacgcccgagccctcatg
ctgcagggagtggatctgctggcggatgctgtcgccgtcaccatggggccgaagggaaga
acagttattattgaacaaagctgggggagccccaaagtgacaaaagatggtgtgacagtg
gcaaaggcaatcgacttaaaagacaaatacaaaaacattggagccaagttggttcaagac
gttgccaacaatacaaatgaagaggcaggagatggtactactactgcaacggtacttgca
cgtgctattgccaaagaaggctttgagaagatcagcaaaggagctaatccagtggaaatc
agaaggggggtgatgcttgcagttgatgctgttatagctgaactgaagaagctgtctaaa
ccagttacaactccagaagaaattgcacaggttgccacaatatcagcgaatggagatcag
gaaataggcaatataatttctgatgccatgaaaaaggtcggccggaaaggtgtaatcact
gtcaaggatggaaaaactctaaatgatgaattagaaatcattgaaggtatgaagtttgac
cgaggctacatctctccatatttcattaatacagccaaagggcagaaatgtgaattccag
gatgcttacgttttaatcagtgaaaagaagatttccagtgtacagtccatagttccagct
cttgaaattgccaatagtcaccgcaaacctttggtcattattgctgaagatgttgatgga
gaagccctcagcactctagtcttgaacaggctcaaggttggtcttcaggttgttgctgta
aaagcaccaggttttggtgacaacaggaaaaaccagcttaaggatatggcaattgctaca
ggtggtgctgtgtttggagaggagggcttgagcctaaatgtagaagatattcagcctcat
gattttggaaaagttggagaggtgattgtgaccaaagatgacaccatgcttctaaagggg
aagggtgagaaggctcaaattgaaaaacgcattcaagaaattattgaacagctagaagtc
accacaagtgaatatgaaaaagagaaactgaatgaacgattggccaaactatctgatggg
gtagcagtattgaaggttggcggcacaagtgatgttgaagtaaatgagaagaaggacaga
gttactgatgccctgaacgcgacccgtgctgctgtagaggaaggcattgttccaggcggt
ggatgtgcattgcttcgctgcattccagcattagatgccttaaaaccagccaacgaggat
cagaaaattggcattgaaataattaagagaacactgaaaattccagcaatgactattgca
aagaatgcaggtgttgaaggatcattaatagttgaaaaaatactgcagagtccatcagaa
gttggctatgatgcaatgcttggggactttgtaaatatggtagaaaaaggaatcatagac
ccaacgaaggttgtgagaacggctctgatggacgctgcaggtgttgcttctctcttatca
acggcagaagcagtagtgactgaagttcctaaagaggaaaaagagccagcaatgggagga
atgggtgggatgggtggaggaatgggaggtggcatgttctaa
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