Lagopus muta (rock ptarmigan): 125696592
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Entry
125696592 CDS
T09141
Symbol
FN1
Name
(RefSeq) fibronectin isoform X1
KO
K05717
fibronectin 1
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04510
Focal adhesion
lmut04512
ECM-receptor interaction
lmut04518
Integrin signaling
lmut04810
Regulation of actin cytoskeleton
lmut04820
Cytoskeleton in muscle cells
lmut05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125696592 (FN1)
04518 Integrin signaling
125696592 (FN1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125696592 (FN1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
125696592 (FN1)
04810 Regulation of actin cytoskeleton
125696592 (FN1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
125696592 (FN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmut04131
]
125696592 (FN1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lmut04147
]
125696592 (FN1)
00536 Glycosaminoglycan binding proteins [BR:
lmut00536
]
125696592 (FN1)
04990 Domain-containing proteins not elsewhere classified [BR:
lmut04990
]
125696592 (FN1)
Membrane trafficking [BR:
lmut04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
125696592 (FN1)
Exosome [BR:
lmut04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
125696592 (FN1)
Glycosaminoglycan binding proteins [BR:
lmut00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
125696592 (FN1)
Domain-containing proteins not elsewhere classified [BR:
lmut04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type I domain-containing proteins
125696592 (FN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
fn1
Fn3_PBP1
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
fn2
Fn3_Dep-1_2nd
Fn3_VIN3
Fn3_Dep-1_3rd
NDNF
Interfer-bind
FN3_Tor_3rd
Ig_RIMBP2
MSP1_barrel
Motif
Other DBs
NCBI-GeneID:
125696592
NCBI-ProteinID:
XP_048808387
LinkDB
All DBs
Position
8:complement(33663841..33712085)
Genome browser
AA seq
2395 aa
AA seq
DB search
MPGRGGLRLALLALCLGAAAAAAAGGGERQRRGGKNRRQAQTASVPQATPAQGKQTCFDN
GRYYQINQQWERIYLGNTLVCTCYGGSRGFNCESKPEPEETCFDKYTGSTYRVGETYERP
KDSMIWDCTCIGAGRGRISCTIANRCHEGGKSYKIGDTWRRPHETGGYLLECVCLGNGKG
EWTCKPLAERCYDNTAGTSYVVGETWEKPYQGWMMVDCTCLGEGSGRITCTSRNRCNDQD
TKTSYRIGDTWSKKDNRGNLLQCICTGNGRGEWKCERHTSLHTTSTGSGSPSFTNVQTAL
YQPQPQQPQPQPHGHCVTDNGVVYSVGMQWLKTQGSQQMLCTCLGNGVSCQEIAVTQTYG
GNSDGEPCVLPFTYNGRTFYSCTTEGRTDGHLWCSTTSNFEQDRRYSFCTEQNVLVQTRG
GNSNGALCHFPFLYNNRNYTDCTSEGRRDNMKWCGTTENYDADQKFGFCPMAAHEEICTT
NDGIMYRVGDQWDKQHDMGHMMRCTCVGNGRGEWTCIAYSQLRDQCIVDGITYDVNQTFH
KRHDEGHMLNCTCFGQGRGRWKCDPVDQCQDSETRTFYQIGDSWEKYVHGVRYQCYCYGR
GIGEWHCQPLQAYAGATGPVQVIITESTNQPNSHPIQWNAPKTSHISKYILRWRPKNSGR
HWKEATIPGHLNSYTISGLKPGVVYEGQLISVQQHGPKEVTRFDFTTTSTTAVTSNTVSG
ETTLLPPMVATSESVTEITASSFVVSWVSASDTVSGFRVEYELSEEGDEPQYLDLPSTAT
SVNIPDLLPGRKYIVNVYQISEEGEQNLILSTSQTTAPDAPPEHNVESVDDTSIVISWSR
PQAPITGYRIVYTPSVEGSSTELNLPDTATSVTLSDLMPGVQYNISIYAVEEHQESTPVF
IQQETTGVPRTDEVPSPKDLQFVEVTDVKVTIMWTPPQSQVSGYRVEAIPVNRPGQHGQR
LPITRSSFAEVVDLLPGTTYLFKIFAVSQGRESKPLTGEQTTKLDAPTNLRFINTTEHSV
LVLWTRPRAIISGYRLTAGPTRGGQPRTYNVGPSATKYLLRNLQPGTEYTVYLVAVKEDL
QSARETGVFTTYQPVGSVPPFNTEVTETSIVITWTPAPRIGFKLGVRPSQGGEAPREVIS
DSGSIVISGLTPGVEYTYSLTVLMDGQERETPIIRRVTTPLSPPTNLRLEPNPDTGILIV
SWDRSTTPGISGYRVTTAPTDGQQGSTLEEVVGADQTSCTFENLNPGVEYNVSVYAVKDD
QESIPISKTVTQAVPPPTDLRFTNVGPDTMRVTWTAPTSIVLSSFLVRYSPVKKEEDVAE
LTISPSDNVVVLTNLLPGTEYLVRVYSVSEQHESAPLSGIQKTGLDSPTGLDFSDITANS
FTVHWIAPRATITGYKIRHHPEHGVGRPKEDRVPPSRNSITLTNLLPGTEYVVSIIAVNG
REESVPLVGQQTTVSDVPRDLEVNPTSPTSLEISWDAPAVTVRYYRITYGETGGNSPVQE
FTVPGTMSRATITGLKPGVDYTITVYAVTGRGDSPASSKPVTVTYKTEIDTPSQMQVTDV
QDNSISIRWLPSSSPVTGYRVTAVPKKGHGPTKTKNVPPDQTQVTIEGLQPTVEYMVSVY
AQNQNGESLPLVETAVTNIDRPKGLTFTEVDVDSIKIAWESPQGQVTRYRVTYSSPEDGI
HELLPAPGGEEDTAELHGLRPGSEYTINIVAIYDDMESLPLTGTQSTAIPPPTNLKFTQV
TPTSLTVNWNAPNVRLTGYRVRVNPKEKTGPMKEINLSPDSTSAVVSGLMVATKYEVSVY
ALKDSLTSRPAQGVVTTLENVSPPRRARVTDATETTITITWRTKTETITGFQIDAIPAAS
GQNPIQRTISPDVRAYTITGLQPGNDYKIYLYTLNENARSSPVVIDASTAIDAPSNLHFL
TTTSNSLLATWQPPRAKITGYIIRYEKPGSPAKELLPRPRPGATEATITGLEPGTEYTIY
IIAVKNNQKSEPLVGRKRTDDLPTLITGPHPNQPDILDVPSVDEGTPYLTNNRYDNGNGI
QLPGTSGHPQTIGHQGQQVFLEEHGYRRPVPTTATPLRPGSRRQPPNVDEAIEIPGYQVP
IIVEPLYPHSRGPRRNDTTGQEALSQTTISWRPLLESTEYIISCQPVSQDEDTLQFRVPG
TSSSATLTGLTRGATYNIIVEALKDHRRQKVLEEVVTVGNTVSEGLNQPTDDTCYDTYTG
SFYSIGEEWERLSETGFKLWCQCLGFGSGHFRCDSSKWCHDNGVNYKIGEKWDRQGENGQ
MMSCTCLGNGKGEFKCEPHETTCYDDGKMYQVGEQWQKEYFGAICSCTCYGGQQGWRCDN
CRRPSVEVAPEGSAGHTYPQFTQRYHQATNTNVNCPIECFMPLDVQADTQHPRGK
NT seq
7188 nt
NT seq
+upstream
nt +downstream
nt
atgccgggccgcggcggtttgcggctggcgctgctcgccctctgcctgggggcggcggcg
gcggcggctgcgggagggggcgaaaggcagcggcgcggagggaagaaccggcggcaggcg
cagaccgcctcggtgccgcaagccacccccgcgcagggcaagcagacctgctttgacaat
ggacggtactaccagataaaccagcagtgggagcgcatttacctggggaacacgttggtc
tgtacctgctacggtggaagcagagggtttaactgcgaaagcaaacccgaacctgaagag
acttgctttgacaaatacactggatccacttaccgagtaggggagacttatgagcgcccc
aaggactccatgatctgggactgtacttgcattggagctggacgtgggagaatcagctgc
accattgccaatcgctgccatgaaggcggcaagtcctacaagatcggcgatacctggcgt
cggcctcatgagacgggcggctatttgctggagtgtgtgtgcctgggcaacggcaagggc
gagtggacctgcaagcccttggccgagaggtgctatgataacacggccgggacgtcctat
gtggtgggtgagacctgggagaagccctaccagggctggatgatggtggactgcacctgc
ctgggggagggcagcggccgcatcacctgcacctccagaaataggtgcaatgaccaagac
accaagacttcctacagaattggagacacttggagcaagaaggacaaccgggggaacttg
cttcagtgcatctgtactggtaacggcagaggtgaatggaaatgcgaaaggcacacatcc
ctgcatacaactagcactggatctggctctcccagcttcacaaatgtacagacagcattg
taccagcctcagcctcaacagccccaacctcagccacatggccactgtgtaactgataac
ggagtggtgtattctgtgggtatgcagtggctgaagacgcagggcagccaacaaatgctt
tgtacttgtctgggcaatggagtcagctgccaggaaatagctgtgacccaaacatatggt
ggcaattctgatggagaaccctgtgttctgcctttcacctacaacgggaggactttctac
tcctgcaccactgaaggccgcacagatgggcacctctggtgcagcaccacttccaacttt
gagcaggacaggagatactccttctgtactgagcagaatgttttggtccagacacgtggt
ggcaattccaatggtgctctgtgccacttccctttcctgtacaacaaccgcaactatacc
gactgtacttctgagggacggagagacaacatgaagtggtgtggaaccactgagaactat
gatgctgaccagaaatttggcttctgccctatggctgcccatgaggaaatctgcaccacc
aatgatggtatcatgtatcgtgttggggaccagtgggataaacaacacgacatgggccac
atgatgaggtgtacctgcgtaggaaatggccgtggagagtggacttgcattgcatactcc
caactcagagatcagtgcatcgtggatggtatcacctatgatgtgaaccagacgttccac
aagcgtcacgatgaggggcacatgctgaactgcacgtgctttggccaaggccgcgggaga
tggaagtgcgatcccgttgatcagtgccaggattctgaaacccgtaccttctaccaaatt
ggagattcctgggagaagtacgtccatggtgtcagataccagtgctattgctatggtcgt
ggtattggagagtggcactgccagcctctgcaagcctatgctggagcaactggacctgtt
caggtgatcattacagagagtacaaatcagccaaactcccaccccatccagtggaacgct
cccaaaacgtctcacatcagcaagtacattctgcgctggagaccgaaaaactctggaagg
cactggaaggaagctactatccctggtcacctgaactcctacaccatctctggcctgaag
cctggtgtggtgtatgaaggacagcttatcagtgttcagcagcatggacccaaagaagtc
acacgctttgattttaccacaactagcactactgcagtgacaagcaacactgtttcagga
gagacaactcttcttcctcccatggttgctacttcagagtcagtcaccgaaatcacagcc
agcagctttgttgtctcttgggtttctgcttctgacacagtttctggattccgtgttgag
tatgaactgagcgaggagggtgatgagccacaatatcttgatcttccaagcacagccact
tctgtcaacatccctgacttgcttcctggtcgcaagtatatcgttaatgtctatcagatc
tctgaagaaggcgagcagaatctgatcctgtctacttcacagacaacagctcctgatgca
cctcctgagcacaatgtggaaagcgtcgatgacacgtcaattgtcattagctggagcaga
ccacaggctccaatcacaggctacagaattgtctacacaccctctgtggaaggcagcagc
acagagctcaacttgcctgacactgctacctctgtaacactcagtgacctgatgccaggt
gttcagtacaacatcagcatctatgcagtggaggaacatcaggagagtactcctgtcttc
atccagcaggaaaccacaggcgtcccacgcacagatgaagttccttctcccaaagatctg
caatttgtggaggttaccgacgtcaaggtcaccatcatgtggaccccaccccagagccaa
gtgtctggctatagggtggaagcaatccctgtcaatcgccctggccagcacggccagaga
ttgcccattactagaagctcttttgctgaagtcgttgacctgctcccaggaacgacctat
ctcttcaagatctttgctgtgagccagggcagggagagcaaacctttgactggagagcaa
accaccaagctcgatgcccccaccaacctgaggttcatcaacaccacagagcattccgtg
ctggtgttgtggacgcggccccgtgccatcatctcaggatacagactgactgcaggtccc
acgaggggaggtcagccacggacatacaacgtgggcccttctgccactaagtacctcctc
aggaacctgcagcctggcactgagtacacggtgtacctcgtggcagttaaagaagacttg
cagagtgccagagagactggagtcttcacgacgtatcagcctgttggctccgttcctcct
tttaacacagaagtgactgagacttcaatcgtcatcacctggacacctgccccaagaatt
ggtttcaagcttggtgtgcgcccaagccaaggtggagaggctccccgtgaggtcatctct
gattctggcagcattgtgatatctggcctgacccctggtgtggagtatacctacagcctc
acagtcctgatggacggccaggagagagagaccccaatcatcaggagagtgaccacacca
ctgtctccaccaaccaacctgcgcctggagcccaatcctgatactggaatcctgatagtc
tcctgggatagaagcacaactccaggcatcagcggctaccgagtgaccactgctcctaca
gatgggcagcagggctctaccttggaggaagtagtaggtgcagatcagacctcctgcacc
tttgagaacctaaaccctggtgtggagtacaatgtcagcgtttacgcagtcaaagatgac
caggagagcatccccatctccaaaacagtcactcaagctgtgcctcctcccactgatctc
cgcttcactaatgtggggcctgataccatgagggtgacatggactgcaccaacttccatc
gtgctgagcagtttcttggtgcgctactcacctgtgaagaaggaggaggacgttgcagag
ctgacaatttcaccctcagacaacgtggtggtcttaacaaatctgcttcctggtactgag
tatctggtgagagtctacagtgtttctgagcaacatgagagtgcgcctttgtctggaatc
cagaaaacagggctcgattcccccactggccttgacttctcggatataaccgctaactcc
ttcaccgtccactggatcgctcctcgcgccaccattacgggctataagattcggcatcac
ccagagcacggcgttggcagacccaaggaggaccgtgtgcccccatcacggaactccatc
accctcaccaacttgctcccagggacagaatacgtggtcagcatcatcgccgtcaacggc
agggaggagagcgtgcccttggttggccagcaaacaaccgtgtcagatgttccaagggac
ctggaagtcaaccccaccagcccaaccagcctcgagatctcttgggatgctcctgcagtg
acagtcagatactaccggatcacttatggtgaaacaggtggaaatagccctgtgcaggag
ttcacagtgcctggcaccatgtctcgtgctaccatcactggcctcaaacccggtgtggac
tacaccatcactgtgtatgctgtaactggtcgtggagacagccctgccagcagcaagcct
gttactgtcacctacaaaacagaaatagacacaccatcccagatgcaagttactgatgtc
caggacaacagcatcagcatcagatggctcccttcatcatccccagtcacagggtatcgg
gtgacagctgtccccaagaaagggcatggacccacaaaaaccaagaatgttcctccagat
caaacacaagtcactattgaaggcctgcagcccacggttgagtatatggtcagtgtctac
gctcagaatcagaacggagagagcctccccttggtcgagacagctgtcaccaacattgac
cgccctaaaggactaacattcactgaggtggatgttgattccatcaaaattgcttgggaa
agcccgcaggggcaagtcaccaggtacagggtgacctactcaagccctgaggatggaatc
catgagctattgccggccccaggtggcgaagaagacactgctgagctgcatggcctcagg
ccaggttctgagtacactatcaatatcgttgccatatacgatgacatggagagcctgccc
ctcactgggacccagtccacagcaattccacctccgaccaacctcaagttcactcaggtg
actcctaccagtcttaccgtcaactggaacgcgccaaacgttcgtctcactggctacagg
gtcagagtgaaccccaaagagaagactggcccgatgaaagagatcaacctttctccagac
agcacatctgctgtcgtgtcaggattaatggtggcaaccaagtatgaagtgagtgtgtat
gccctgaaggactctctgaccagccgacctgcccagggggtggtgaccactcttgaaaat
gtcagtccccctcgcagagcccgtgtgacagatgccacagagacgaccatcaccattacc
tggagaaccaagactgagacaatcactggcttccaaattgatgccatcccagcagcaagt
ggccagaaccccatccagaggaccatcagccccgacgttagggcttacactatcactggc
ttgcaacctggcaatgactacaagatctacctttacaccctgaatgagaatgcccgcagc
tctccagtagtgattgatgcttccacagccatcgatgctccttccaacctgcacttcctt
acaacaacgagcaactccctcctggccacctggcagcctccacgagccaagatcacgggc
tacatcatcagatatgagaaacctggctcaccagccaaggagcttctgcctcgccctcgg
cccggcgccactgaggctactattacaggcttagaaccaggaactgaatacaccatctac
atcattgctgtgaagaacaatcaaaagagtgaaccgctggttggccgaaaaaggacagat
gatctgcccacgttgattactggacctcaccccaaccagcccgacattctggacgtgcct
tctgttgatgaggggaccccttacctcacaaacaatcggtacgacaatggaaacggcatc
caacttccaggcacttcagggcacccgcagacaataggacaccaaggtcagcaagtcttc
ttggaggagcatggctacaggcggcctgtacccaccacggcgactccccttaggcctggg
tcgagacggcagccaccaaatgtagatgaagccattgaaatcccaggctaccaagtgcca
atcatagtggagcctttgtacccccactcccgtgggcccaggcgcaacgacaccactggc
caagaagctctttcccagacaaccatctcctggaggcctttgctggagagcactgagtac
atcatctcgtgccaaccggtcagccaggacgaagatactttgcagttcagggttcctggc
acttcctccagcgccacgctcaccggcctcaccagaggggccacctacaacatcatagtg
gaagccctgaaggatcaccggagacaaaaggtgttggaagaggtggtcacagttggcaac
actgtgtctgaaggactaaaccagccgactgacgacacctgctatgatacttacactggc
tccttctattccatcggcgaggagtgggagcgattatctgaaacgggctttaaactctgg
tgccagtgcttgggctttggcagtggtcacttcagatgcgattcctctaagtggtgccat
gataatggtgtgaactacaagattggggagaagtgggaccggcagggggagaatggccag
atgatgagctgcacctgccttgggaatggaaaaggagaattcaagtgtgaacctcatgag
accacgtgctacgacgatgggaagatgtaccaagttggagagcagtggcagaaggaatat
tttggggccatctgctcctgcacttgttatggaggacagcagggctggcgttgtgacaac
tgccgcaggcccagcgtggaagtggcccccgaaggctcagctggccacacctacccccag
ttcacacagagataccaccaggccaccaacaccaacgtcaactgccccattgagtgtttc
atgcccctagatgtacaggcagacacacaacatccacggggaaagtaa
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integrated database retrieval system
