Lagopus muta (rock ptarmigan): 125697060
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Entry
125697060 CDS
T09141
Name
(RefSeq) collagen alpha-1(XXVIII) chain-like
KO
K23619
collagen type XXVIII alpha
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lmut01002
]
125697060
Peptidases and inhibitors [BR:
lmut01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
125697060
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Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
Motif
Other DBs
NCBI-GeneID:
125697060
NCBI-ProteinID:
XP_048809600
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Position
8:18212777..18244821
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AA seq
1174 aa
AA seq
DB search
MFFKFWWLLWILEQHEFLAENLNEEKRYRLRRPTVKHILSNTVEKYPSHSDQDEDCILEI
AFLLDSSESAKHYNHEQQKKFVLEVVDQMKGLQLSSGRTLSWRMALLQYSSTVSTEQTFH
DWKGPEAFKSHIAPITYIGHGTYTTYAITNLTQLYMREGTPGSLKLAVLFTDGVDHPRNP
DIFAATADAKNQGIVLFTMGMTRVAEEVSNAAKLRLLASVPASRFVSNLQEKGTVEKVLT
EMKDLSEEQCPKATICKCEKGERGLPGPAGKKGRTGDDGTPGLKGAKGEPGLSGIPGRDG
IEGKSGYKGEKGERGECGIPGIKGDRGPEGPVGPKGARGLQGPQGQSGDQGPEGLPGSKG
ERGLPGPPGLPGETGIGLPGPKGDTGLTGRPGPVGPPGVGEPGVLGPQGPQGVQGERGLP
GEGLPGAKGDRGFDGPKGPRGLPGISIKGEKGEFGPPGLPGPIGLPGIGIQGEKGVEGPK
GPPGSRGFPGQGLPGPKGEQGLPGETGVPGERGIGEPGSKGEPGLSGLAGLPGLPGEDGA
PGQKGEPGLPGLRGPEGAPGIGIQGEKGDQGQRGIRGLTGPTGMPGPAGAKGEPGVPGRL
GMPGPPGRAVPGPKGDIGLPGLAGPIGEPGFGLPGAKGDRGLPGLPGPYGAKGDGYPGPP
GLPGLPGLPGEQGPEGVGLPGPKGAPGSRGPVGLPGPPGEGLPGPKGAAGRPGLPGPLGP
PGEGIQGIKGEPGIQGMPGPRGPPGEGLLGQKGDRGATGEKGKKGEKGNVGDPGLSGEPG
KTGPKGEQGLTREDIIKLIKEICGCGIKCKEIPMELVFVIDSSESVGPENFEIIKDFVTA
LVDRVTVGRNATRIGLVLYSLEVQLEFGLNKHTTQQDVKRAIRKMQYMGEGTYTGTAIRK
ATQEGFLGARAGVRKVAIVLTDGQADKREAVKLDVVVREAHAANIEMYAIGIVNTSDPAQ
AEFVHELNLIASDPDSEHMYLIDDFNTLPALESKLVNQFCEDEHGTFIYNRNGNVASISG
PSFHSVSSSPSYRMLQNNSINGQALSAQTPGVSTQTDVPTVVVNEAYEDNLEEKEQSPLV
TVDTRAVTSSLPPSSSDKVLSTARLTPRPGSVLDLRCKLRLDQGPCRVYIIKWYYDQQAN
ACAQFWYGGCDGNANRFENEEECRETCVFSSGET
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgttcttcaaattctggtggcttttgtggatacttgaacaacatgaatttttagcagaa
aatctcaatgaagaaaaaagatacagactgagaagacccacagttaaacacattctgtca
aacactgtagaaaaatatcctagccacagtgatcaagatgaagactgcattctggagatc
gcttttttactggacagctctgaaagtgctaagcattataatcatgaacagcaaaaaaaa
tttgttttagaagtggtagaccaaatgaaaggtctgcagcttagttctggacggaccctc
agctggaggatggccttacttcagtacagcagcactgtttccacagagcaaacttttcat
gactggaaaggtcctgaagcattcaaatcccacattgctcctatcacctacataggtcat
ggtacctacacaacttatgctattactaaccttacacaactctacatgagagaagggact
ccaggtagtttgaaactagctgtactcttcactgatggagttgaccatccaagaaaccca
gatattttcgcagctacagctgatgctaaaaaccaaggaattgtattgttcacaatggga
atgaccagagtggctgaggaggttagcaatgctgccaagctccggctcctggccagtgtc
ccagcatccagatttgtttccaacctccaggagaaaggaactgtggagaaagttctcaca
gaaatgaaagatctgtctgaggaacaatgccccaaggctaccatatgtaagtgtgagaag
ggggagaggggccttcctggccctgctggaaaaaagggtcgcactggggatgatggaact
ccaggcctgaaaggagcaaagggggaaccaggccttagtggaattccaggacgagacgga
atagagggaaaatctgggtacaaaggagaaaagggtgaaagaggtgaatgtggaatccca
gggataaaaggagacagaggtcctgaaggcccagttggccccaaaggtgcaagaggactg
cagggtccacaaggacaatctggagatcaggggcctgaaggtctgccaggatcaaagggt
gaaagaggtcttcccggaccacctggcttgcctggagagactggaataggactgccaggc
ccaaagggcgacactggtttgacaggaagaccaggcccagttggcccacctggagttggt
gagccaggagttctggggcctcaaggaccacaaggtgtacaaggggaacggggtttacca
ggagaagggcttccaggagcaaagggagaccgtggttttgatggaccaaaaggccctcgt
ggacttccaggaatcagcataaaaggtgaaaagggtgaatttggtccacctggtttacct
ggaccaataggattacctggaattggaatccaaggagagaagggagtggaaggccccaaa
ggacctccgggctctagagggtttccaggacagggactacctggaccaaagggtgagcaa
ggcttgccaggagagactggagtgccaggagaaagaggtattggagagcctggttctaag
ggtgagccaggcctttcaggactggcaggtctgcctggccttccaggagaagatggagcc
cctggacaaaagggtgaaccaggattacctggtcttagaggtcctgaaggtgctccaggc
attggaatacagggggagaagggagatcaaggtcagagaggaatacgtggattaacagga
ccaacaggaatgcctgggcctgcaggagctaaaggagagcctggtgtaccaggacgtctt
ggaatgccaggccctcctggaagagctgtgcctggaccaaagggtgacattggcctacct
ggtcttgctggaccaattggagaaccaggttttgggcttcctggagcaaagggtgaccga
ggccttccaggactccctgggccctacggggcaaaaggagatggttaccccggtccacct
ggcttgccaggccttcctggacttcctggtgagcaaggccctgagggagttggattaccg
ggacctaagggtgctcctggtagtagaggaccagtcggtctcccaggtcccccaggagaa
gggctgccaggaccaaaaggagctgcagggcgcccagggctgcctggccctttgggacct
cctggtgaaggcattcaaggaattaagggggaaccaggaattcaaggaatgccaggacca
cgaggcccccctggagaagggcttttgggacagaagggagatcgaggagcaacaggggaa
aaagggaaaaaaggagaaaagggcaatgtgggtgatcctggtttatctggagaacctggc
aaaactggaccaaagggagagcaaggcttaacaagagaagatataattaaattaattaaa
gagatatgtggttgtggtattaaatgcaaggaaattcctatggagcttgtatttgtgatt
gacagctctgagagcgtgggaccggagaattttgagattatcaaagactttgtaactgca
ttagtagacagagtaactgtaggcagaaatgctaccagaattggccttgtactgtacagt
ctagaagttcagctagaatttggtctcaacaagcatacaactcaacaggatgttaaacga
gcaattagaaaaatgcagtacatgggagaaggcacttacacaggaactgctatccgtaaa
gcaacccaggaagggtttttaggtgctcgagcaggagtgcgcaaagtagccattgtgctc
accgacggccaagcggacaagagagaagcggtgaaactggatgttgtcgttcgagaggct
catgcagcaaacatcgaaatgtatgcaataggaatcgtaaatacttccgatccagcgcag
gctgagtttgtgcatgaactcaatctgatcgcttcagacccagacagcgagcatatgtat
cttatcgatgactttaatactctcccagctctggagtccaaattagtcaaccaattttgt
gaagatgagcatggtactttcatttacaatcgtaacggaaatgttgcaagcataagtgga
ccatctttccattcagtatcttcaagtccttcatatcgcatgcttcagaacaacagtatt
aatgggcaagcactgtcagcacagacacctggggtatctactcagactgatgtacctact
gtggtagttaacgaagcctatgaagataatctagaggaaaaggaacagtcaccattggta
acagtggacactagagctgtgacatcatcgttgccaccatcatcttcagacaaagtgctt
tcaactgcaaggctcacaccaaggccaggaagtgttctggacctccgatgcaagttaagg
ctggatcaagggccgtgccgtgtttatatcataaaatggtattatgatcaacaagccaat
gcatgtgctcagttttggtatggtggctgtgatggaaatgcaaatcgttttgagaatgaa
gaggaatgtagagagacttgtgtattttcttctggagaaacctga
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