Lagopus muta (rock ptarmigan): 125697102
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Entry
125697102 CDS
T09141
Symbol
PTCHD1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lmut04990
]
125697102 (PTCHD1)
Domain-containing proteins not elsewhere classified [BR:
lmut04990
]
Other domain-containing proteins
Patched domain-containing proteins
125697102 (PTCHD1)
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GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
125697102
NCBI-ProteinID:
XP_048809725
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All DBs
Position
1:complement(117213428..117254239)
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AA seq
888 aa
AA seq
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MLRQVLHRGLGTSFSRLGHFVASHPVFFASAPVLISILLGASFSRYQVEESVEHLLAPTH
SLAKIERNLVDSLFPVNRSKHRLYSDLQTPGRYGRVIITSFRKANMLDQHHTDLILKLHS
AVTRIQVQRPGFNYTFAHICILNNDKTCIVDDIVHVLEELKAARSSNRTNFAITYPITHL
KDGREVYNGHQLGGVTVHSKDRVKSAEAIQLTYYLQAINSLNDMVAEKWESIFCDTVELF
QKSNRKVKMYPFTSSSLKEDFQKTSRVSERYLITSLVLVVTLAILCCSMQDCVRSKPWLG
LLGLLTVTLATLTAAGIINLTGGKYNSTFLGIPFVMLGHGLYGTFEMLSSWRKTREDQHV
KERTAAVFADSMLSFSLTTAMYLVTFGIGASPFTNIEAARIFCCNSCIAIFFNYLYVLSF
YGSSLVFTGYIENNYQHSIFCRKVPKPEVLQEKPAWYRFLLTARFSEDTTDSEETNTYES
HLLVWFLKRYYCDWITNTYVKPFVVLFYLVYISFALMGYLQVSEGSDLSNIVATATRTIE
YTAAQQKYFSNYSPVIGFYIYESIEYWNTSVQEDVLEYTKGFVRISWFESYLNYLRKLNI
STGLPKKNFTDMLRNSFLKAPQFAHFSEDIIFSKKYNNEVDVVASRMFLVAKTMESKREE
LYDLLETLRKLSLTSKVKFIVFNPSFVYMDRYASSVGAPLQNSCISALFLLFFSAFLVAD
SLINVWLTLTVASVEFGVIGFMTLWKVELDCISVLCLIYGINYTIDNCAPLLSTFVLGKE
FTRTKWVKNALEVHGVAILQSYLCYIVGLIPLAAVPSNLTRTLFRCLFLIALVTFFHCFA
ILPVILTFLPPSKKKRKEKKNPENREEIECVEMVDMDSTRVVDQITTV
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgttgcggcaggtcttgcacagggggctggggacgtccttctcccggctcggccacttc
gtcgccagccacccggtgttcttcgcttcggcgcccgtgctcatctccatcctgctgggc
gccagcttcagccgctaccaggtggaggagagcgtggagcacctcctggcccccacccac
agcctggccaagatcgagcggaacctggtggacagcctcttcccggtgaaccgctccaag
caccggctctactccgacctgcagacgccggggcgctacggccgggtgatcatcacctcc
ttccgcaaggccaacatgctggaccagcaccacaccgatctcatcctcaagttgcactct
gctgtgaccaggatccaagtgcaaagacctggtttcaattacacgtttgcccatatatgt
atcctgaacaatgacaagacatgcatagtggacgacatagtgcatgtgctggaggaatta
aaggctgctcgttcttctaatcgaactaattttgcaatcacttatccgattactcactta
aaggatggcagggaagtgtataatgggcatcaacttggtggggttactgtgcacagcaaa
gaccgggtgaagtctgcagaagccattcagctcacctactacttgcaggcaatcaactcc
ttgaatgacatggtggcagaaaagtgggaatccattttttgtgacactgttgaacttttc
cagaaatccaacaggaaagtcaaaatgtatccttttacttcttcttcgctgaaggaggat
ttccagaagacgagcagggtgtcagaacgctacctgatcacaagcttggtccttgtggtc
accttggccattctctgctgctccatgcaggattgtgtccgcagcaaaccctggcttggc
ctgctgggattgctgaccgtgacccttgccaccctgactgcagccgggatcatcaatctc
actggtgggaaatacaattccaccttcctggggatccccttcgtcatgttaggtcatggg
ttatatgggacttttgaaatgttgtcctcctggagaaaaactagagaagaccaacatgtt
aaagagaggactgcagccgtatttgcagactccatgctctcgttttccctcaccactgcc
atgtacctggtcacttttggaataggtgccagtcccttcactaacattgaagcagccagg
attttctgctgcaattcctgtattgcaattttcttcaactacctctatgtactctccttt
tatggttccagcctggtgtttactggctacatagaaaacaactaccagcatagtatcttc
tgtagaaaggtaccaaagccagaggtattgcaagagaagcctgcatggtataggtttctt
ctgacagccagattcagtgaggacacaacggattcagaggaaacgaacacttacgagagt
catcttttggtgtggttccttaaacgctattattgtgactggataacaaacacttacgtc
aagccttttgtagttctcttttaccttgtttatatttcctttgccttaatgggctacctg
caggtcagtgaagggtcagacctgagcaacatcgtagcgaccgctacacggaccattgag
tatacggctgcccagcagaagtatttcagtaactatagcccggtgattgggttctacatc
tacgagtcgatagagtactggaacaccagtgtccaggaggacgtgctggagtataccaag
ggctttgtgaggatatcttggtttgagagctacttaaattaccttaggaaactcaacata
tctactggattgcccaagaaaaatttcaccgatatgttgaggaactccttcttgaaagcc
cctcagtttgcccatttttcagaggatatcatcttttccaagaaatacaacaacgaagtt
gatgtcgtggcctccagaatgttcctggtggccaagacaatggaatccaagagggaagaa
ctttatgacctcctggaaaccctgaggaagctctctctcacctccaaggtgaaattcatc
gttttcaatccatcatttgtgtacatggatcgttacgcctcttcagtgggagccccctta
caaaactcctgcattagtgctttatttctgctcttcttctctgcattcctggtggcagac
tctctgatcaatgtatggctcactctaactgttgcctcggttgagtttggagttataggt
tttatgaccttgtggaaagtggaactagattgtatttctgtgttgtgcttgatttacgga
attaattatacaattgacaactgtgctccactgttatcaacctttgtcctgggcaaagag
ttcacaagaactaaatgggtgaaaaatgccctggaagtgcatggggtagctattttgcag
agctacctctgctatattgttggtctgattcctcttgcagctgtgccttcaaatctgacc
cgtacactgttcaggtgcttgtttttaatagcattagtcaccttctttcactgctttgcc
attttacctgtgatattgacttttttgccaccgtccaagaagaagaggaaagagaagaag
aatcctgaaaaccgtgaggaaatagagtgtgttgaaatggtggatatggatagcactcga
gtggttgaccaaattacaacagtctaa
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