Lagopus muta (rock ptarmigan): 125697197
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Entry
125697197 CDS
T09141
Symbol
CLASP1
Name
(RefSeq) CLIP-associating protein 1 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lmut03036
]
125697197 (CLASP1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lmut04812
]
125697197 (CLASP1)
Chromosome and associated proteins [BR:
lmut03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
125697197 (CLASP1)
Cytoskeleton proteins [BR:
lmut04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
125697197 (CLASP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT
HEAT_EZ
TOR1L1_N
Sec7-like_HUS
HEAT_2
RTP1_C1
Cnd1
HEAT_DAAF5
PDS5
ParcG
MMS19_C
MMS19_N
TPR_20
KH_DEAH11_1st
TAN
Motif
Other DBs
NCBI-GeneID:
125697197
NCBI-ProteinID:
XP_048809989
LinkDB
All DBs
Position
8:10629475..10784320
Genome browser
AA seq
1577 aa
AA seq
DB search
MEPSMEYCLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKMVDGLATSWVN
SSNYKVVLLGIDIISALVSRLQDRFKAQIGTVLPSLLDRLGDSKDSVREQDQTLLLKIME
QAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQSLTLSKIVPHICNLLGDPN
SQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMIQSSSDKN
FDDEDSVDGNRPSSANSSTSSKAPANSRRVGMGTTRRLGSAALGSKSSTGKEGAGAVDEE
DFIKAFEDVPTVQIYSSRDLEESINKIREILSDDKHDWEQRVSALKKIRSLLLAGAAEYD
NFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPN
SAKVMATSGVVAVRLIIRHTHIPRLIPIITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSL
ERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREADHLYHTLESSYQKALQSHL
KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTPGSLQRSRS
DVDVNAAASAKSKVTSSGASTPFSSAAALPPGSYASLDGTTTKTEGRIRTRRQSSGSATS
VTSTPADTRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSTYGGLSSGTSRVQPVP
SSSEKRSKIPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPARGFP
PLASRRHSRSTSALSTADSVGQSDRFGLGQSGRMPASVNAMRVLSTSTDLEAAVADALLL
GDSRSKKKPVRRRYEPYGMYSDDDANSDASSACSERSYGSRNGGIPHYLRQTEDVAEVLN
HCASSNWSERKEGLIGLQNLLKSQRTLSRVELKRLCEIFTRMFADPHSKVFSMFLETLVD
FIIIHKDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFI
VDQTQTPNLKVKVAILKYIESLARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVRKAA
QIVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHLKNSSNTSVGSPSNTLGRTPSRH
SSSRTSPLTSPTNCSHGGLSPSRFWGWSADGLSKHPPPLSQPNSIPTAPSHKTFRRSYSP
SMLDYDTENLNSDEIYSSLRGVTEAIEKFSFRSQEDLNEPIKRDGKKDCDMVSRDGGLAV
PTSDVRGGNDTVEGGRMALDNKTSLLNTQPPRAFSGPRAREYNPYPYSDTINTYDKTALK
EAVFDDDMDQLRDEVPIDHSDLVADLLKELSNHNERVEERKGALLELLKITREDNLGVWE
EHFKTILLLLLETLGDKDHSIRALALRVLREILRNQPARFKNYAELTIMKTLEAHKDSHK
EVVRAAEEAASTLASSIHPEQCIKVLCPIIQTADYPINLAAIKMQTKVIERISKESLHQL
LPDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEELKPHLAQLTGSKMKLLNLYIKRA
QTTNSNSSSSSDVSTHS
NT seq
4734 nt
NT seq
+upstream
nt +downstream
nt
atggagcccagtatggagtactgcttagcgcaggtgctgcagaaggatgttgggaagaga
cttcaggttggtcaggaattgatagattacttctcagataaacagaagtcagctgatctg
gaacatgatcagacgatgctggataaaatggtcgatggactggccacctcttgggtgaat
tccagcaattataaggtggtgctgctggggatcgacatcatctccgcactggtgtcccgc
ctgcaggaccgcttcaaggctcagattggcacagtgctgcccagcttgctggataggctg
ggggattccaaggactctgtgcgggagcaggatcagaccttgctgctgaaaatcatggaa
caggctgctaatcctcagtatgtgtgggataggatgttaggaggattcaaacacaagaat
ttccggacaagagaagggatctgtctctgccttattgcaacactcaatgcatctggagct
cagagtttaacactgagtaagatagtgccgcatatatgtaacttacttggagatccgaac
agccaggttcgagatgcagcaataaacagccttgtggaaatctacagacatgttggtgaa
cgtgtaagggctgatctcagtaaaaaaggattaccccaatcccgattgaatgtaattttc
acgaaatttgacgaggtccaaaaatctggaaacatgatccagagctcaagtgataaaaat
tttgatgatgaagactctgtggatgggaacagaccttcctcagctaactcctctacatca
tcaaaggctcctgcaaactcacgtagagttggaatggggactactcgcagacttgggtct
gcagctctgggatccaagtcctcaacaggcaaagagggagcaggtgctgtagatgaagaa
gacttcattaaggcatttgaagatgtcccaacagttcaaatttattctagccgggatctt
gaggaatccataaacaaaataagagagatactatctgatgataaacatgactgggaacag
agggtatctgctttgaaaaagatccgctccttactgttggctggagctgcagaatacgat
aacttcttccaacacttacggctcctggatggagcatttaaattatctgctaaagacctg
cgatctcaggtagtgcgggaagcttgtatcacgctgggacatttatcatcagttctggga
aacaagtttgatcatggggcagaagccattatgccaacaatttttaatctaattccaaat
agtgccaaagtcatggccacttctggtgttgtagcagttagattaatcattcgacataca
cacatcccccgactaatacccatcataaccagtaattgtacctccaagtctgttgcggtt
agaaggcgctgttttgaatttttagacctgctgctgcaagagtggcaaacccactcccta
gaaagacacatatcagtgttagctgaaacaataaagaagggaattcatgatgcagactct
gaagccaggatagaagcaagaaagtgttactggggtttccacagtcacttcagcagagag
gcagaccatttgtaccacaccttggagtcctcctaccagaaggccttgcagtcgcatttg
aagaactctgacagcattgtgtccttgccacagtcggatcgctcctcctccagctcccag
gagagtctcaaccgtccactgtctgccaaaagaagtcctactggaagtactacatcaaga
gcatctacagtaagtacaaaatctgtgtcaacaccaggatctctgcagcgatcccgcagt
gacgttgatgtgaatgcagcagctagtgccaagtcaaaagtgacatcttctggagcatcc
acccccttcagttctgctgcagccctgcccccaggctcatatgcatcactagatggtact
actactaaaactgagggtcggattcgtacaaggaggcagagctctggcagtgccaccagc
gtcacctcaacacctgctgatacccgaggccgcagccgggctaaagtggtttcccagtcc
cagcgatccagatcagctaatcctgctggtgctggtagtcggtctagttctccgggtaag
ctgttaggaagcacctatggtggcttgagcagtggaacatccagagttcaacctgtgcca
tcatcttcagagaagcgcagcaagatcccgcggagccagggatgcagtcgagagacgagt
cccaacagaataggactagcacggagcagtcgtatcccccgacccagcatgagtcagggg
tgcagccgtgataccagccgtgagagcagtcgagatacaagccctgctcggggctttcct
ccacttgcttctcgacgtcattccaggtccactagtgctctctccactgctgattctgtt
gggcagtcagaccggtttggactcggacagtcaggcaggatgcctgcttctgtgaatgcc
atgcgagtcctaagcacaagcacagacctggaggccgctgtggctgatgcactgctgtta
ggagactccaggagcaagaaaaagccagtgagaagaagatatgaaccctatgggatgtac
tccgacgatgacgctaacagtgatgcatcaagcgcttgctcagagcgctcctatggttcc
aggaatggaggcattcctcactatctgcggcagaccgaagatgtggctgaggtcctgaac
cactgtgccagctccaactggtctgaaaggaaggagggcctcataggtctccagaactta
ctgaaaagccagcggacactgagccgagtggaattaaaaaggctgtgtgaaatatttact
cgcatgtttgctgaccctcacagcaaggtcttcagcatgtttctggaaaccctggttgat
ttcatcatcattcacaaagatgacttgcaggattggctttttgttctcctgacacagttg
ctgaagaaaatgggagcagatttgctggggtctgtgcaggcaaaagttcagaaagctctg
gatgtcaccagggattcttttccatttgatcaacaatttaacattttgatgaggtttatt
gtggatcagacgcaaacaccaaacctcaaggtgaaagtagctatcctgaaatatattgag
tccttggcaagacagatggatccgacggactttgtgaactctagtgagacaagacttgct
gtgtctagaattataacttggacaacagaaccaaagagctcagatgtgagaaaggcagca
caaatagtcctgatttctctctttgaactgaacactcccgagtttaccatgctacttggt
gccttgccaaaaacattccaggatggtgctaccaagctcctgcacaaccacctcaagaac
tccagtaacaccagtgtgggttcccccagcaatactcttggtaggactccttctcggcac
tccagcagcagaaccagccccttgacttcacctaccaactgttcccatggtgggctgtct
ccaagtcggttctggggttggagtgcagatgggctgtcgaagcacccccctcccctttct
cagcctaactccatccccaccgctccttcccacaagactttcagacgctcttattctccc
agtatgctggattatgacacggagaacctaaattctgatgaaatctacagctctcttcgt
ggagtcacagaagcaattgaaaagtttagttttcgtagtcaagaggacctgaatgaacca
atcaaacgtgatgggaagaaagactgtgacatggtgtctcgagatggtggccttgcagta
cctaccagtgatgtccgaggaggcaatgatactgtagaaggaggaaggatggctctagat
aacaaaacctccctacttaacacacagccaccccgcgccttttcagggccacgagctcga
gagtataacccctatccttattccgacacaattaacacttatgacaagactgccctcaag
gaagcagtttttgatgatgacatggatcagcttcgggatgaagtacccattgaccattca
gatttggtggctgaccttctgaaagagctctctaatcacaatgagcgggtggaggagcgg
aaaggagctctcctggagctgctgaaaatcacaagggaggataatcttggagtttgggag
gaacatttcaaaaccattctgctcttgctcctggaaacgcttggagacaaagatcactca
atacgagcgttggcactgcgagtccttagagaaatcctacggaatcagccagcaaggttc
aaaaactacgcagagttgaccatcatgaagacactggaagcacacaaggattcccacaag
gaggtcgtcagagctgctgaggaagctgcttctaccctggcaagctccatccatcctgag
caatgcatcaaggtgctttgccccatcattcagacagcagattatccaattaatttagct
gccatcaagatgcagacaaaggtcattgagaggatttccaaggaatcactgcatcaactc
cttcctgatattattcctggattgttacagggttatgataatacagagagcagtgtccgt
aaagctagtgtattttgtctggtggcaatttattcagtaattggtgaagaactgaaacct
catctcgcacaactcacaggaagcaagatgaagctactaaacttgtacataaagagggcc
caaactaccaacagcaacagcagctcctcttcagatgtttcaacgcacagttaa
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