KEGG   Lagopus muta (rock ptarmigan): 125697202
Entry
125697202         CDS       T09141                                 
Symbol
RIF1
Name
(RefSeq) telomere-associated protein RIF1 isoform X1
  KO
K11138  telomere-associated protein RIF1
Organism
lmut  Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:lmut00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lmut03032]
    125697202 (RIF1)
DNA replication proteins [BR:lmut03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    125697202 (RIF1)
SSDB
Motif
Pfam: Rif1_N
Other DBs
NCBI-GeneID: 125697202
NCBI-ProteinID: XP_048810015
LinkDB
Position
8:complement(1574945..1605478)
AA seq 2326 aa
MSAAAGLRPLLETLQDPAAPAGDLTDAHLSLVNRLSGEEGKEFTVGVRKHFPQLCRIFKA
HISSENSELSNAALQALGFCVFNSKITSELSASEVEDLLSTLNSIAVKTSDKNTRTRALW
VISKQTFPSDIIKKEVSSLISTLETILTKGDVQSMIVEYEALNVVIRLMEQAPAQMGEEA
VRWAKLIIPLVVHSAHKVQLRGATALEIGMPLLLQKQQEVAAVTEHLMTTKLISELQKLF
STKNETYVLKLWPLFVKLLGKTLHRSGSFINSLLQLEELGFRSGSPVVKKIAFIAWKSLI
DNFALNPDILCSAKRLKLLMQPLSSIHVRTEALALTKLEVWWYLLMRLGPQLPANFEQVC
IPLIQSTLSVDSSAALQGTPSRVPSNPSLANPPQKPGPYPFASPATPRMNLNSSTAGPVA
IPSIQLLGIEMLLHFLMGPEVLDFAKQNKLVLSLEPLQHPLIGSPSFFCKHASTFINAVQ
DGFIAVGKEVPESMLNNIWKDINGHVKTAIESGNKKEKQGSEVLTMLLQALKNIVRSNSL
PAQKVLSLIDITVKELPPKVLGSPAYQIADMDLLNGTPALFLVQLPFHNNLLEWCVTDER
FFIILETLMRYVLSGPTSPLAFSESVLCVINQNAKQVENKEHLWRMWSIVVNPLTDWIHR
TNEVNQGDALEHNFNAVYNALLLPVFHIFPVQDFPQPTMKSLLRAWSDLYRAFARCAALV
ATAEENLCCEELCAKIISGLEGETPVMSAMLDGLTHVVGVMVDCINFSPYGIKYQPKNRS
PQTPTDWSKKKREPLGKLSSLFKLLVMLLDSFHALSSEESCPESLASVGHSVIAVLHNII
SHVSLPSVIGTMFAVFSKPLAVFYDKTKLADVPKAYSNLNSKLEKLLAEIILCLQSHCTG
CYDSELLEQLSPLLCVVFQHKSKQIRKQCANFWNATFAKAASLTYPEELKPVLSQAKQKM
PLLLPGFESIEIADEQSGPFSDEAENSQWDAKLSGMEVNLGQKRDSILAQTSELKNEVKD
KSDNVQVSSAKLKLEFSASKPKSDVLLEEEKSVDFVFIPPETKARILTEHQKEVLRSKRV
GIPAMYNNLDSSQDTTLFSQYTQSQEDSLEKSSLIENAKEDIKNNPQEENERTKSCIADS
NGVTEDCKLQNSLEDVKEKSAAHIEKNSILNSEGELQRGDRTGIVEEEPSVGEGLEKSHT
EAASQESLVGNENTSNVSSSSASSDVISGTPQPVSRRQSFITLEKFDGSESRPFSPSALN
SASGMSRSAPVPDKQGNTTICKTGHKPGKSGEENKKSSQAEQISAAKRRLTRRQSKMEQH
GNQQSKVLTSSEQEKSAQESFVSNSMENSPESSCSVEDTERILTAQPQPVSSAEPEIKKT
EGVIAEIEKVRALEMDSKENTPPKVAVSSEQVTGDGSQGPHASLSQKILRRSSRRRSENA
ELAAGSQDKEDGYQKKDRRKEDEKALQKKVPQTKEDASQKQKAVCGKTSEYAVKKESGLP
ERSAAEDLGSKEPSAPRGANEEANRSARKPEDALKNDTESQDCSSDTVGEKKRERPRYHT
RRSSQGLLSSIENAEADGSETKKGSLKKKSGKTKNRSDSLEGKRKDVQPESQNHEVSSQA
DESKNVLGMNESELSSEAITDAALMPAPSDMKNQELLADAGEAEGSASSKTSPNTQTASV
EQSKAGMLTGSFSDPQVSDEVLKGEDNKCTEKQGSVEQRLSVQPEIAQGADASGSDLSSA
QMQDCQHKRSKRVRKVKSCDCCSKRMKQQTSLSESKTEDPCELIEPQTTPGQAAVSAAEV
SGSSNLEESLSITPCAMSTPLPPAKESSMLSLERDKACEDRLQGNCGVMEEEVENPAHTA
GEISDLVVEVKVEEVDDESDGAEQCVSVSERASDEPGDSSVVGGDHSEEKAAGEKEEKSE
HGEMEEMPEVLADGGKPETKQMDELESKQDSKEKAENALGEVCITPDNEMGEELPEAEIT
GPENMAVGNEDVVKNQSADSPQKPEGLNSFISVNESPSGVQARCTWSPSASPSTSILKRG
VKRHQEDDTLSPANKIRRVSFANPIYQEGLADDIDRRSPVIRSHSSPSSRSLKILSNIQT
KPITTPTKGFLSPGSRNPKFMSSKKCLMTEMVKESLPSPAECVYPALAGCKAPVDVILPQ
ITSNICARGLGQLIRAKNIKTLGDLSTLTASEIKTLPIRSPKVSNVKKALRGYHEQQVKS
RGCEEIGALEDVERTVNSAGDKSPPGDEEKLATDLGEPIALSSSSPPPADLLSQLEVLAA
QFTSSDLRSYPGSRLFEMQEKLASMTDCIMRTLRSRWTSPPHDSAE
NT seq 6981 nt   +upstreamnt  +downstreamnt
atgagcgccgccgccgggctgcggccgctgctcgagacgctgcaggatcccgccgccccc
gcgggggacctcacggacgcgcatctttctctcgtcaaccgcctgtctggtgaggaaggc
aaagaattcactgtgggagtcagaaaacactttcctcagctttgcagaatatttaaggca
cacattagtagtgaaaattcagagctgagtaatgcagcattacaagctttggggttctgt
gtttttaattcaaagatcacctctgaattatctgcatctgaagtagaggatttgctttcc
acgttgaacagcattgctgtgaagacttcagacaaaaacactcgcactcgagcactttgg
gtgatctctaagcagacgtttccttctgacattattaaaaaggaggtgtccagtcttatt
tctacattggaaaccatacttactaaaggagatgtacagtctatgattgtggagtatgaa
gcactgaatgttgttatacgcttaatggaacaagctccagcccagatgggagaagaggct
gtgaggtgggcaaagctgatcatccctctggtcgtccattcagctcacaaagtgcagtta
cgaggtgccactgcactggagataggcatgccactgctgctccagaaacagcaggaggtg
gcagctgtaactgagcatctgatgaccacgaaattaatttcagaacttcagaaattattt
tctacaaaaaatgagacgtatgtattaaagctgtggccactgtttgtcaagttacttggg
aagactctgcatcgtagtggcagtttcatcaattctttgctgcagctggaggaacttgga
ttccgtagtggctcaccggtggtcaagaaaatagctttcattgcatggaagagtctaata
gataattttgctctaaatccagatattttgtgcagtgctaaaaggctgaaattgctgatg
cagccactgagctcaatccatgtgagaacagaggctttggcactgacaaagctggaggtc
tggtggtatctactcatgaggctgggacctcagctgcctgctaactttgaacaggtctgc
ataccattaatccagagcactctaagtgtagattcttctgctgcactacaaggaactccc
tcacgtgtgccatccaaccccagtttagcaaaccctccacagaaaccaggtccttatcca
tttgcaagtccagccacaccaaggatgaacttgaattccagtactgcaggaccggtggca
attccttccattcagcttctggggattgaaatgctgcttcacttcttgatgggaccagaa
gttttggactttgcaaagcaaaacaaacttgtgctcagtttagagcctctccagcacccc
ctgattggtagcccatcctttttttgtaagcacgccagcacatttataaatgcagttcag
gatggatttattgcagttggaaaagaagttcctgaatctatgctgaataatatctggaag
gacataaatgggcatgtgaaaacagctattgaatcaggtaataagaaagaaaagcaagga
tcagaagtgctgactatgttgctccaggccttaaaaaacattgttagatcaaattctctt
cctgcacagaaagtactgtccctcattgatattactgtgaaggaattacctcccaaagtg
ttgggatcaccagcttatcagattgctgatatggatcttttaaatggaacaccagctttg
ttcttagttcagctgcctttccataacaacctcttggagtggtgtgtgacagatgagaga
ttcttcatcattctggaaactctcatgcgctatgttttatctgggcctacatctccactg
gctttcagtgaatctgtgctgtgtgttataaatcagaatgccaagcaggtggaaaacaag
gagcatctttggaggatgtggagtattgttgttaacccactgactgactggattcatcgg
actaacgaagtaaatcaaggtgatgctctggagcacaacttcaatgctgtctataatgct
ctgttgctaccagtattccatatcttccctgttcaggactttccacagccaactatgaaa
tccttgcttcgtgcttggtcagacctgtacagagcatttgctcgctgtgctgctttggtt
gcaacagcagaagagaacctgtgctgtgaagaactgtgtgccaaaataatatctgggcta
gaaggtgaaactccagtaatgtctgcaatgctggatggtctcacccatgttgtgggagtt
atggtggactgcatcaatttttcaccctatggtattaaatatcagccaaaaaatagatct
ccacagacacctactgactggtctaagaagaaaagggagccccttgggaagctctcctcc
ctgttcaagctcctggtgatgttactggactcctttcatgctctcagttctgaagaaagc
tgcccagaatcgttggcgtctgttggtcattcagttattgctgttcttcacaacatcatc
agccacgtttctttgccgtcggtgattgggaccatgtttgcagttttttcaaaaccactg
gcagtgttttatgacaaaacaaagcttgctgatgtacctaaagcatacagtaatcttaac
agcaagctcgaaaaactcctggctgagattatcctgtgtttacagtcccactgcacgggc
tgctatgacagtgagctgctggagcagctttctccattgctctgtgtagtatttcagcat
aagagcaaacagatacgcaaacagtgtgccaacttctggaatgcaacatttgctaaggct
gcatcactgacgtaccctgaagaattaaaacctgtgttaagccaagccaaacagaaaatg
ccacttttgctgcctggctttgaaagcattgagatagctgacgaacaaagcggcccattc
tctgatgaggcagaaaactcccaatgggatgcaaagctgagtgggatggaagtaaacttg
ggtcagaaacgagactctatattggcccagacaagtgaactgaaaaatgaagtaaaggac
aagtctgataatgtgcaagtctcatctgcgaagttgaaattggagttttcagcttcaaag
cctaaaagcgatgtacttctggaagaagagaaatctgttgattttgtattcattcctcca
gaaacaaaagcaaggatattgacagaacatcaaaaagaagtgcttaggtcaaagagagtt
ggtattcctgctatgtacaacaatttagactcatcacaagatactaccttattttctcaa
tatactcagagccaggaagattctttggaaaagtcatctttaatagaaaatgcaaaagaa
gatattaaaaacaatcctcaggaagaaaacgaaaggactaaaagctgtattgctgattca
aatggagtcacagaggactgcaaactgcagaattcactggaggatgtgaaagagaagtct
gctgctcacatagagaagaactcaattttaaacagcgaaggagaattgcaaaggggtgat
agaactggaatcgttgaagaggagccatcagttggagagggattagaaaaaagtcataca
gaagcagcttcacaggaatccttagtagggaatgaaaacacttctaatgtcagtagcagt
tctgcttcaagcgatgtgatctcaggaacgccacagcctgtgagccgacggcaatctttt
attacattggagaagtttgatggttcagagagcaggcccttcagcccttcagcattaaac
agtgcctcagggatgtctcgaagtgctcctgtgccagataaacagggaaatacaaccata
tgcaagactgggcataagccagggaagtctggggaagagaataaaaagtcttcacaagct
gagcaaatttctgctgcaaaacgaaggttgacacgcagacagagtaaaatggaacagcat
ggaaatcaacagtccaaggtgttaactagctcagaacaagaaaaaagtgcacaggagtct
tttgtttccaatagcatggaaaatagtcctgaatcatcttgttcagtagaagacacggag
cgtattctcactgctcagccccaacctgtcagctctgcagagccagaaatcaagaaaact
gaaggtgtaatagcagaaatagaaaaggtccgggcgttggaaatggattctaaggaaaat
acacccccgaaggtggctgtgtcctctgagcaggtaacaggtgatggtagtcagggccca
catgcatctctgagtcagaaaatactgagacgttcttcgagacgacggtcagaaaatgca
gaactggcagcaggtagtcaggataaggaagatggctaccaaaaaaaagacagacgtaaa
gaagatgaaaaagctctgcaaaagaaggtgccccagactaaagaggatgcatctcagaag
caaaaagcagtttgtgggaaaacttcagaatatgcagtcaaaaaagaaagtggcctacct
gagagaagtgctgcagaggacttgggctcaaaggagccttctgctccaaggggtgctaat
gaggaagcaaacagaagtgctaggaagccagaagatgcattgaagaatgacacggaaagt
caggactgtagctcagacacagtaggtgagaagaaaagggaaaggccacggtaccacacc
aggaggagttcacaggggttgctttccagcatagaaaacgcagaggctgatggctctgag
accaagaagggaagtttaaagaaaaaatctggaaaaacaaaaaatagaagtgattctctt
gaaggtaaacggaaggatgtccagccagaaagccaaaatcatgaggtgtcttctcaagca
gatgaaagtaagaatgtattggggatgaatgaaagtgaattaagcagtgaagccatcaca
gatgcagcactgatgcctgcaccatctgatatgaaaaatcaagaactgcttgcagatgct
ggcgaagctgaggggtctgccagctcaaagacttcacccaatacacagactgcaagcgtg
gaacaaagcaaagctggtatgttgacaggatctttcagtgaccctcaggtgtctgatgaa
gttttgaaaggagaggacaataaatgcactgaaaagcaaggatctgtggaacagcgtttg
agtgttcagcctgagattgcacaaggagcagatgcttcagggagtgacctttcctctgca
caaatgcaggactgtcagcacaagagaagcaaaagggtgagaaaagtaaagagctgtgac
tgctgctcgaaaaggatgaagcagcaaacatcactcagtgagtcaaaaactgaggatcct
tgtgaactgattgagccccagaccacgccaggtcaggcagctgtcagtgcagcagaggtg
tctggcagctcgaatctggaggagagtttgtccatcacaccttgtgccatgagcacaccg
ctgcctcctgctaaggaatccagtatgttgagcttggaaagagacaaagcatgtgaagat
cgtctgcaaggaaattgtggtgttatggaggaagaggtagagaatccagcacatacagca
ggtgaaattagtgatcttgtagtggaagtaaaagtggaagaagttgatgatgagagtgac
ggagctgagcagtgtgtgtctgtgtctgagcgtgcttcggatgagcctggtgacagctct
gtggttggaggggatcacagtgaggaaaaggcagctggagaaaaagaagaaaaaagcgag
catggggaaatggaggagatgcctgaggtgttggctgatggtggcaaacctgagacaaaa
cagatggatgagctagaaagcaagcaggacagcaaggagaaagctgagaacgctctggga
gaagtttgcattactccagataacgagatgggagaggagctgccggaagctgagattaca
gggcctgagaacatggctgtaggcaatgaagatgtagtaaaaaatcagagtgcagattct
cctcagaagccagaaggcctgaattctttcatttcggttaatgagagccccagtggagtg
caggcacgctgcacgtggtctccttcagcttctccatccaccagtattttgaagagaggg
gtaaaaaggcaccaagaagatgataccttgtcacctgctaataagattcgtcgggtctct
tttgcaaatcctatttatcaagaaggactggctgatgacatagacaggagaagtcctgtc
attagatcccattcttcaccgtcttcacgaagtcttaaaatcttatctaatattcagact
aagcctattaccactccaaccaaaggatttctgtccccaggatctcgtaaccctaaattt
atgagctcaaagaagtgtttaatgacagaaatggtgaaggagtcactgccttcccctgca
gaatgtgtgtatcctgccttagctggatgtaaggcacccgttgatgtaatcttacctcag
atcacatcaaatatatgtgccagaggtctggggcagctcattcgagccaagaacataaag
acactgggagatctcagtactctgacagcatcagaaatcaaaactcttcccatccgttct
cctaaagtttccaacgttaaaaaagctcttagaggatatcatgaacaacaggtaaaatct
cgagggtgtgaagaaattggagctctcgaagatgtggagagaacagtaaacagtgcaggg
gataaatctcctcctggggatgaggaaaaacttgcaacagatctgggtgagcccattgcc
ctgagcagcagcagcccaccccctgcagatctcctgagccagctggaagtgctggctgcc
cagttcacctcctcagatctccgcagctaccctggcagccgcctgtttgagatgcaggag
aagcttgccagcatgacagactgcatcatgagaaccctgcggtcccgatggacgtcgcca
ccccacgacagtgcagagtag

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