Lagopus muta (rock ptarmigan): 125697307
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Entry
125697307 CDS
T09141
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125697307 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmut03019
]
125697307 (DHX36)
03012 Translation factors [BR:
lmut03012
]
125697307 (DHX36)
Enzymes [BR:
lmut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
125697307 (DHX36)
Messenger RNA biogenesis [BR:
lmut03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
125697307 (DHX36)
Translation factors [BR:
lmut03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
125697307 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
AAA_19
nSTAND3
ATPase
AAA_14
NPHP3_N
AAA_23
PhoH
Motif
Other DBs
NCBI-GeneID:
125697307
NCBI-ProteinID:
XP_048810242
LinkDB
All DBs
Position
9:complement(789286..810745)
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AA seq
983 aa
AA seq
DB search
MSYEQRRDWGRGRGRGGDGGSSGGGGHGGRGGGRGRHPSHLKGREIGLWYARKQGQKSKE
ADRQQRAVVRMDERREEQIVQLLNAVQPRAEKEQEAMSWWSGDEDGHTPEQPPKVKPGAE
KAEKAPVKRRPVLEKTLLDQDVEYLFEKSDQDADLDEQLKEDLRKKKSDPRYIEMQRFRE
KLPSYGMRQELVNLINNNRVTVISGETGCGKTTQVTQFILDDYIERGKGSTCRIVCTQPR
RISAISVAERVAAERAEACGNGKSTGYQIRLQSRLPRKQGSILYCTTGIVLQWLQSDKHL
SSISHVVLDEIHERNLQSDVLMSIIKDLLNVRLDLKVILMSATLNAEKFSEYFDNCPMIH
IPGFTFPVVEYLLEDVIEKLRYTPENTDRRPRWKKGFMQGHISRPEKEEKEEIYRERWPE
YLRQLRGRYSASTIDALEMMDDDKVDLDLIAALIRHIVLEEEDGAILVFLPGWDNISSLH
DLLMSQVMFKSDRFIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVF
VIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDD
YQLPEILRTPLEELCLQIKILKLGGIAYFLSKLMDPPSRDAVMLAINHLMELNALDRQEE
LTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKVADARR
KELSKNTKSDHLTVVNAFTGWEETRRRGFRTEKDYCWEYFLSPNTLQMLHNMKGQFAEHL
LAAGFVNSRDPKDPKSNTNSDNEKLLKAVICAGLYPKVAKIRPSFSKKRKMVKVCTKTDG
TVNIHPKSVNVEETEFHYNWLVYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDKDQ
DTIAVDEWIVFQSPARIAHLVKNLRQELDDLLQEKIENPHPVDWDDTKCRDTAVLTAIID
LITTQENESARNFAPRFQSERYS
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgagcagcgccgcgactggggccggggtcggggccgcggcggcgatggcggc
tcctccggtggtggggggcacgggggccgcggcgggggccggggccgccatcccagccac
ctcaagggccgcgagatcgggctgtggtacgcgcggaagcagggccagaagagcaaggag
gcggaccggcagcagcgcgccgtggtgcggatggacgagcggcgggaggagcagatcgtg
cagctgctgaacgccgtgcagcccagggccgagaaggagcaggaagccatgtcgtggtgg
tccggggacgaggacggacatactccagaacagcctccaaaagtgaaaccaggtgctgaa
aaagctgaaaaagctcctgtaaaacggcgaccagtcttggagaaaacacttcttgatcag
gatgtggaatatctctttgaaaaaagtgatcaagatgcggatttagatgagcagcttaaa
gaagacttgagaaagaagaaatctgatcctagatatattgaaatgcagagatttcgagag
aaactcccttcatacgggatgagacaggaacttgtaaacctcataaacaataatcgagtg
actgtaataagtggtgaaaccggctgtggaaagacaacacaagtgacacagttcatcctg
gacgattacatagagcgagggaaaggctccacgtgcagaattgtttgcactcaacccagg
aggatcagtgctatctcagtggctgagagagttgcagctgaaagggcggaagcatgtggt
aatggcaagagtacaggataccagattcgtctacagagtcggttaccaaggaaacaaggt
tcaattctgtactgcaccacaggaattgtccttcagtggctccagtcagataagcatttg
tccagtattagtcatgtagttcttgatgaaattcacgaaagaaatctccaatcagatgtt
ttaatgagcattataaaagaccttttgaatgttcgcttggatctgaaagtaatcctgatg
agtgctactttaaatgcagagaagttttccgagtattttgataactgtccaatgattcac
atacctgggttcacttttcccgtggtggaatacctccttgaagatgtaattgagaagttg
agatacactccggaaaacacagaccgtcggccacggtggaagaaaggcttcatgcaaggc
catataagcaggccagaaaaagaagaaaaagaagaaatctacagggaacggtggccagaa
tatttaaggcagctgcggggcaggtattcagcgagtactatcgatgccttggaaatgatg
gatgatgacaaggtagaccttgacctaatagctgcacttatcagacacattgttctggaa
gaagaggacggtgcaattctagtgtttcttccaggatgggacaacatcagctctctgcat
gatctcttgatgtcacaagtcatgtttaagtcggataggtttattatcatccctttgcat
tccttgatgcctacagttaaccagactcaggtgttcaagaagaccccgccgggagtcagg
aaaatcgtgattgctaccaacattgcagagaccagcattacaatagatgacgtggtgttt
gttatagatggtgggaaaatcaaggaaacccactttgacacacagaacaacatcagcaca
atggctgcagagtgggttagcaaagctaacgccaagcagaggaagggtcgagcaggaaga
gtgcagccaggccactgttaccatctgtacaatgggctgcgtgccagcctgctggatgat
tatcagttaccagagatcttgaggacacctttggaagagctctgcttacaaatcaagatt
ctaaagcttggtggaattgcttattttctgagtaaactcatggatccaccatctcgtgat
gctgtaatgctggccattaatcatctgatggagctgaacgctttggacaggcaggaggag
ctgactccgcttggcgtacatctggcacggttaccagttgaaccacatattggaaaaatg
atcctctttggagctttgttctgttgcttggatccagtacttacgattgcagcaagcctt
agcttcaaagacccttttgtcattcctctgggcaaagagaaagtggcagatgccagaaga
aaggagctgtcgaagaatactaaaagtgatcatctgactgtggtgaatgctttcacaggc
tgggaagagactcgtcggcgtggtttccgaactgagaaagactattgctgggaatatttc
ctgtctccaaatactctccagatgctgcataacatgaaaggacaatttgccgagcatctg
cttgcagctgggtttgtgaacagcagagaccccaaggatcccaagtccaataccaactca
gataatgagaagttgctcaaagctgtcatctgtgctggcttgtatccaaaagttgcaaag
atccggccaagctttagcaaaaagaggaaaatggtgaaagtttgcaccaagacagatgga
acagtgaatattcatcctaaatctgttaatgtggaagaaacagagttccattacaactgg
ctggtgtaccacttgaagatgagaactagcagtatctacctgtatgattgtacagaagtg
tctccatactgtctgctgttctttggaggagacatatccattcagaaggataaagaccag
gacaccattgctgtggatgaatggatagttttccagtctccagcgagaatagcacactta
gttaagaatttaagacaagagctcgatgatcttctccaagagaaaatagagaacccccac
cctgtggactgggacgacactaaatgcagggatacagcagtactgacagctattatagac
ttaatcaccacccaggagaatgaaagtgccaggaatttcgctccgcgattccagagcgag
cgctacagctga
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