Lagopus muta (rock ptarmigan): 125697368
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Entry
125697368 CDS
T09141
Symbol
EIF4A2
Name
(RefSeq) eukaryotic initiation factor 4A-II
KO
K03257
translation initiation factor 4A
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmut03019
]
125697368 (EIF4A2)
03012 Translation factors [BR:
lmut03012
]
125697368 (EIF4A2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lmut04147
]
125697368 (EIF4A2)
Messenger RNA biogenesis [BR:
lmut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
125697368 (EIF4A2)
mRNA cycle factors
Stress granule specific factors
125697368 (EIF4A2)
Translation factors [BR:
lmut03012
]
Eukaryotic type
Initiation factors
eIF-4
125697368 (EIF4A2)
Exosome [BR:
lmut04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125697368 (EIF4A2)
Exosomal proteins of bladder cancer cells
125697368 (EIF4A2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
AAA_22
UvrD-helicase
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
125697368
NCBI-ProteinID:
XP_048810430
LinkDB
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Position
9:complement(7786876..7793746)
Genome browser
AA seq
407 aa
AA seq
DB search
MSGGSADYSRDHGGPEGMEPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQ
QRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIDLKETQALVLAPTRELAQQIQKV
ILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMF
VLDEADEMLSRGFKDQIYEIFQKLSTNIQVVLLSATMPMDVLEVTKKFMREPIRILVKKE
ELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTV
SALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHR
IGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEMPMNVADLI
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcggctccgcggattatagcagagaccatggcggccccgagggaatggagccc
gatggtgtcattgagagcaattggaatgagattgtcgacaattttgatgatatgaattta
aaggaatcccttctaaggggcatttatgcttatggttttgaaaagccttcagctattcag
cagagagctattattccatgcatcaaagggtatgatgtgattgctcaagctcagtcaggt
actggcaagacagccacatttgctatttccatcctgcagcagttggagattgatctcaag
gagacccaagcactagtattggcccctaccagagaactggctcaacagattcaaaaggta
attctggcccttggagattacatgggagcaacatgccatgcttgcattggtggcacaaat
gttcgcaatgaaatgcagaaacttcaggctgaagctccacacattgtggttggaactcca
ggccgtgtgtttgatatgttgaacagacgctacctttcacccaaatggatcaaaatgttt
gttctggatgaagctgatgaaatgttgagccgaggatttaaggatcaaatctacgagatc
ttccagaaactaagcactaacattcaggttgtgctgctgtcagctacaatgccaatggat
gtgttggaagtgaccaaaaagttcatgagagagcccatacgtattctagtgaagaaggaa
gaactgactctggagggtatcaagcaattctacattaatgttgaaagagaggagtggaag
ctggatactctctgcgatttgtatgagacactgaccattactcaggccgttatctttctg
aatacaagaagaaaagtggactggcttacagaaaaaatgcatgccagggacttcacagtc
tcagctctgcatggtgacatggaccagaaggagcgggatgttatcatgagagagttcaga
tcgggatcaagccgtgtcttgatcactactgacttgctggctcgtggcattgatgtgcag
caagtttctttggttataaattatgacctgccgaccaatcgtgaaaattacattcacagg
attggccgaggaggtcgctttggcaggaagggtgtggctataaactttgtcactgaagag
gacaagaggattctgcgtgatattgagacattctacaatactacagtggaggagatgcca
atgaatgtggctgatctcatttaa
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