Lagopus muta (rock ptarmigan): 125697384
Help
Entry
125697384 CDS
T09141
Symbol
MKRN1
Name
(RefSeq) E3 ubiquitin-protein ligase makorin-1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lmut04121
]
125697384 (MKRN1)
Enzymes [BR:
lmut01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125697384 (MKRN1)
Ubiquitin system [BR:
lmut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125697384 (MKRN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MKRN1_C
zf-CCCH_4
Torus
zf-CCCH
zf_CCCH_4
zf-CCCH_2
zf-CCCH_DUS3L
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-CCCH_3
zf-rbx1
zf-RING_5
zf-C3HC4_4
zf-ANAPC11
zf-CCCH_PARP12
zf-CCCH_9
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
125697384
NCBI-ProteinID:
XP_048810477
LinkDB
All DBs
Position
1:complement(56011711..56036929)
Genome browser
AA seq
473 aa
AA seq
DB search
MAEAVALGTTADAAAAAVLGPSTAAGATGTIFGPAAVPPLALGPGGGWTKQVTCRYFMHG
VCKEGDNCRYSHDLSTSQSAMVCRYYQRGCCAYGDLCRYEHTKPLMQEEEEEEEEEETTV
NPAAKMYPSVSSDLALFPEIVEEDIIEIEDENIDLAAAGVGAEDWVNAVEFVPGQPYCGR
AAPSCTEVPLEEMVIEEEYEKQEADVEMKKELCPYAAVGECRYGENCVYIHGDVCDMCGL
QVLHPIDAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGI
LSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVEEKEEKQKLIQKY
KEAMSNKPCRYFDEGRGSCPFGGNCFYKHAYPDGRQEEPQRPKAQRRNRFWEFIEERENG
DPFETDEDEVVTFELGEMLLMLLAAGGDDELTDSEDEWDLFHDELEDYYDLDL
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggcggtggctctgggaacaacggcggatgccgcggcggcggcggtcctgggg
ccgagcaccgccgcgggagccacgggtaccatcttcggacccgcggccgtgccgcccctc
gctctggggccgggtggtggctggaccaaacaggtcacttgcaggtatttcatgcatgga
gtctgcaaggaaggagacaactgtcgctactctcatgacctgtccaccagtcagtctgct
atggtgtgcaggtattatcagcgtggatgctgtgcttacggagatctctgcagatatgaa
cacaccaagccgctgatgcaggaagaagaagaagaagaagaagaagaagagactactgtg
aatccagctgcaaaaatgtatccctcagtatcctcagacctcgcattattccctgaaatt
gttgaagaagatattattgagatagaagatgaaaatatagatctggcagctgctggagta
ggtgctgaagactgggtgaatgctgtagagtttgttcctgggcagccatactgcggacgt
gctgccccttcctgcactgaagtacccttggaggaaatggtgattgaggaagagtatgaa
aagcaggaagcagacgtggagatgaagaaggagctgtgcccctatgctgcagtgggagag
tgtcgttatggagaaaactgcgtgtatatccatggggacgtctgtgatatgtgcggactg
caggtcttgcatccaattgatgctgcgcagagatcccagcacataaagtcttgcattgaa
gctcacgagaaggacatggagctttcatttgccgtccagcgtagtaaagacatggtgtgc
gggatatgcatggaggtggtgtatgaaaaagctaatcctagtgagcgccgctttgggatc
ctctccaactgcaaccacacttactgtctcaagtgcatccgcaagtggaggagtgctaaa
caatttgagagcaagattataaagtcctgcccagagtgtcggatcacatctaactttgtc
attccaagtgagtactgggtggaggagaaggaagagaagcagaaactcattcagaagtac
aaggaggcaatgagcaacaagccatgcaggtattttgatgaaggccgtgggagctgtcca
tttggagggaactgcttttacaaacatgcgtatcctgatggccgtcaagaggagccgcag
agacccaaagcccagcggaggaatcggttctgggagttcattgaggagcgagagaacggt
gacccatttgagaccgatgaggacgaagtggtgacctttgagctcggtgagatgttgctc
atgctgttggcagcaggaggtgatgatgagctaacggattccgaggacgagtgggacttg
tttcatgatgagctggaagattattatgacctggatctatag
DBGET
integrated database retrieval system
