KEGG   Lagopus muta (rock ptarmigan): 125697389
Entry
125697389         CDS       T09141                                 
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
  KO
K12842  U2-associated protein SR140
Organism
lmut  Lagopus muta (rock ptarmigan)
Pathway
lmut03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lmut00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125697389
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lmut03041]
    125697389
Spliceosome [BR:lmut03041]
 Complex A
  U2 snRNP components
   U2 related factors
    125697389
 Complex B
    125697389
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID CTK3 SET_assoc RRM_7
Other DBs
NCBI-GeneID: 125697389
NCBI-ProteinID: XP_048810496
LinkDB
Position
9:complement(13311315..13353548)
AA seq 1001 aa
MADKAPGGSQKGSGKVRAPDAAHNTGSADTHPLMESKLKAFSIGKMSAAKRTLSKKEQEE
LKKKEDEKAAAEIYEEFLAAFEGSDGNKVKTFVRGGIVNASKEEHETDEKRGKIYKPSSR
FSDQKNQPSQPSNEKPPSLLMIETKKPTLPKNKQKQTTLPGPLKKGEKEKKKSNLELFKE
ELKQIQEERDERHKTKGRLSRFEPPQSDSDGQRRSMDAPSRRNRSSGVLDDYAPGSHDVG
DPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRR
DAERALKNLNGKMIMSFEMKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRE
RLKNPNAPMLPPPKNKEDFEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAMI
MNREINNPMFRFLFENQTPAHVYYRWKLYSILQGDAPTKWRTEDFRMFKNGSFWRPPPLN
PYLHGMSEEQETEAFVEEPNKKGALKEEQRDKLEEILRGLTPRKNDIGDAMVFCLNNAEA
AEEIVDCITESLSILKTPLPKKIARLYLVSDVLYNSSAKVANASYYRKFFETKLCQIFSD
LNATYRTIQGHLQSENFKQRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLVNIMEDKETEE
VPDDLDGAPIEEELDGAPLEDVDGIPIDAAPIDDLDGVPIKSLDDDLDGVPLDTAEDSKK
NEPIFKVAPSKWEAVDESELEAQAVTTSKWELFDQHEESEEEEIPNQEEESEDEEDTQSS
KSEEQHMYSNPIKEEMPESKSSVKYSEMSEEKRAKLREIELKVMKFQDELESGKRPKKPG
QSFQEQVEHYRDKLLQREKEKELERERERDKKDKEKSDSRSKDKKEKEECTPTRKERKRR
HSASPSPSRSSGSRRAKSPSPKSERSERSERSHKESSRSRSSHKDSPRDVSKKGKRSPSG
SRTPKRSRRSRSRSPKKSGKKSRSQSRSPHRSHKKSKKSKH
NT seq 3006 nt   +upstreamnt  +downstreamnt
atggcggacaaggcacccggcggctcgcagaaaggcagtgggaaggtcagagctccggat
gcagcacataacactgggtctgctgatacacatcctttaatggaaagtaaacttaaagca
ttcagcattggcaaaatgagtgctgccaaacggactttgagcaagaaggaacaagaagaa
ttaaaaaagaaggaggatgagaaggctgctgcagaaatttatgaagaattccttgctgcc
tttgagggaagcgatggcaataaagtgaaaacatttgtaagaggaggaattgttaatgca
tctaaagaggaacatgaaaccgatgaaaaacggggtaaaatctataaaccttcatcacga
ttttcagatcaaaaaaaccaaccaagtcaaccgtctaatgagaagcctccatccctctta
atgatagaaaccaaaaagcctacactccccaaaaacaaacaaaaacaaacaactttgcct
gggcctttgaagaaaggagagaaggaaaagaaaaagagcaatctggaactttttaaagaa
gaactaaagcagatacaagaagagcgtgatgaaagacacaaaacaaaaggtagattgagt
cgttttgaacctccccagtcggattcagatggtcagcgtcgttcaatggatgctccttca
agaagaaacagatcatctggtgtactggatgattatgcaccagggtcacatgatgttggg
gatccaagcacaacaaatttgtacctgggaaatattaatcctcaaatgaatgaagagatg
ttatgtcaagaatttggacgctttggaccactagcaagtgttaaaattatgtggccaaga
actgatgaagaaagagcaagagaaagaaattgtggctttgttgcatttatgaacaggaga
gatgctgaaagagctttaaagaacttaaatggcaagatgattatgtcctttgaaatgaag
ctaggctggggcaaagctgtgcctatcccaccacacccaatatacattccaccttcaatg
atggagcataccctcccacctcctccgtcaggtctgccttttaatgcccagcctagggag
aggttgaagaatcccaatgctccaatgttacccccaccaaaaaacaaggaagattttgag
aagactctgtcgcaagccatagtcaaagtggttatcccaacagaaaggaatttgctcgca
ctgatacatcgaatgatagagtttgtggtacgggaagggcccatgtttgaagccatgatc
atgaaccgagaaatcaacaacccaatgttcaggtttctgtttgaaaaccagactccagcc
catgtgtattatagatggaagctttattcaattcttcagggagatgctccaaccaagtgg
aggacagaagattttcgtatgttcaaaaatggatcgttttggaggccaccaccactaaat
ccatatttacatgggatgtcagaagagcaagaaacagaggcatttgtggaggagccaaac
aagaagggtgcacttaaggaggaacagagagacaagctagaggagattttgcgtggatta
acgcctcgaaaaaatgatattggcgatgctatggttttctgtctaaataatgcagaagct
gctgaagaaattgtagactgcattacagagtcgctgtcgattctgaagactcctcttccc
aagaagatagcaagattatatctggtgtcagatgtgttgtacaactcttcagctaaagtt
gccaatgcttcctactacagaaaattttttgaaacaaaattatgtcagatattctctgat
ctcaatgctacttaccgtacaatacaaggccatttacagtctgaaaatttcaagcaacgg
gtaatgacatgcttccgagcatgggaagactgggcaatctatccagaaccgtttttgatc
aaactacagaacattttcttggggcttgtaaatatcatggaagacaaagaaacagaggaa
gtaccagatgatcttgatggtgctcccattgaggaagagcttgatggtgctccattagaa
gatgtggatggaattcctattgatgctgctcctattgatgatctggatggagttcctatt
aaatcgttggatgatgatcttgatggagtacctttggatacagctgaagactcaaaaaag
aatgagcctatatttaaagttgctccttcaaagtgggaagcagtggatgaatcagaattg
gaagctcaagctgttaccacttctaaatgggagctttttgatcaacatgaagaatctgag
gaggaagaaataccaaatcaagaagaggaaagtgaagatgaggaagacactcagagttca
aagtctgaagagcaacacatgtattccaatcctattaaagaagagatgcctgagtccaag
tcatcagtcaaatattcagaaatgagtgaagagaaacgtgccaaactccgggagattgag
cttaaggtgatgaagtttcaggatgagttagaatctgggaagcgacctaagaaaccaggc
cagagttttcaggaacaggttgaacactacagagacaagctgctccagagggaaaaagag
aaggagttggaaagagaacgagaaagggacaagaaggacaaagaaaaatctgattctagg
tctaaagataagaaggaaaaggaggaatgtacaccaacaagaaaagagaggaaaagacgg
cacagtgcttcccccagcccgtctcgcagcagtggcagtagaagagcaaaatccccatcc
ccaaaatcggagcgctcagagcgctctgaacggtcccacaaagagagttcccgttctcgg
tcatcacacaaagactctccaagagatgtcagtaaaaaaggcaaaaggtcaccatctggt
tccaggacacccaaaagatcaagaagatcacggtcgaggtcccctaaaaagtcagggaaa
aaatccaggtctcagtcccgttctcctcacagatctcacaagaagtcaaagaaaagcaaa
cactga

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