Lagopus muta (rock ptarmigan): 125697390
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Entry
125697390 CDS
T09141
Symbol
TRPC1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lmut04040
]
125697390 (TRPC1)
Ion channels [BR:
lmut04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
125697390 (TRPC1)
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
Dsc3_C
MTR4-like_stalk
LHD_TRPY1
RIN1
Motif
Other DBs
NCBI-GeneID:
125697390
NCBI-ProteinID:
XP_048810501
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Position
9:complement(13417316..13437187)
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AA seq
782 aa
AA seq
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MAALYQSADPSASASPNKLLALKDVRQVKEETTLDEKLFLLACDKGDYYMVKKLLEENSS
GEMNINCVDVLGRNAVTITIENENLDILQLLLDYGCQSSDALLVAIDSEVVGAVDILLNH
RPKRSSRPTIVKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQDISLPKPHAVG
CECTLCTAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFELSADLKELSLVEV
EFRNDYEELAQQCKTFAKDLLAQARNSRELEVILNHTSSDEHVDKRGLLEERMNLSRLKL
AIKYNQKEFVAQSNCQQFLNTVWFGQMAGYRRKHTCKKILTVLMVGIFWPVLSLCYLIAP
KSRVGRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNENKKNTMGPALERIDYLLIIWLI
GMVWSDVKRLWYDGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNKFHDYAERKDWDAF
HPTLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQDFGKFLGMFLLVLFSFT
IGLTQLYDKGFTVNEEERDCAGIFCEKQSNDTFHSFIGTCFALFWYIFSLAHVAIFVTRF
SYGEELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKEWKFARAKLWLSY
FDDKCTLPPPFNVIPSPKTICYLFNSLSKWICSHTSSGKVKRQNSLKEWRNLKQKRDENY
QKVMCCLVHRYLTSMRQKMQSTDQATVENLNELRQDLSKFRNEMRDLLGFRTSKYAMFYP
RN
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggcggccctgtaccagagcgcggacccgtccgcttcggcctcgcccaacaagctgctg
gcgctgaaggatgtgcggcaggtgaaggaagagaccacgctagacgagaagcttttcctg
ctggcctgcgacaaaggtgattattacatggttaagaaactcttagaagaaaacagctcg
ggtgagatgaacataaattgcgtagatgtgcttggaagaaatgctgttaccataaccatt
gaaaatgaaaatctggacatactacagcttctcctggattatgggtgccagtcatcagat
gcacttttggtggctattgactcggaagtggtgggagctgttgacattctactgaatcac
cgaccgaaaagatcctccaggccaaccattgtaaaactaatggaacgcattcagaacccg
gaatactcaacaaccatggatgtggcacctgtcatcttagctgctcatcgcaacaactat
gaaattctcaccatgctgttaaagcaagacatatcattacccaagcctcatgctgtaggc
tgtgaatgcacactctgtactgcaaaaaacaaaaaagacagtctgcgacattccagattt
cgtcttgacatctaccggtgtttggccagtcctgctctaataatgttgacggaggaggat
ccaattctgcgagcttttgaacttagcgcagacttgaaagaattaagtcttgttgaggtt
gagttcagaaatgattatgaggagctagctcagcagtgcaaaacctttgctaaagactta
cttgcacaagcaaggaattcacgggagctggaagttattctgaatcatacatctagtgat
gaacatgtagacaaacgagggctgctggaagagaggatgaacctaagtcgcttaaaactt
gcaatcaagtataatcagaaagagtttgttgctcagtctaactgtcagcagtttctcaat
actgtgtggtttggacagatggcaggctatcgacgcaagcacacatgcaaaaaaattttg
actgttttgatggttggcattttctggccagttctgtccctgtgttacttaatagcacct
aaatcacgagtgggtcgtataattcacactccgtttatgaagtttattattcatggagct
tcgtatttcacatttcttctgctacttaatttgtactctcttgtctacaatgagaataag
aagaatacgatgggaccagcccttgagagaatagactatctgctgataatatggctaatt
ggaatggtgtggtcagatgttaaaagactctggtatgatggtttagaagactttttagaa
gagtcacgtaatcagcttagttttgtcatgaattccttgtatttggcaacctttgctctc
aaagtagttgcccataacaagtttcatgattatgctgaaagaaaggactgggatgcattt
catcctacactagtggcagaaggtctttttgcatttgctaatgttctgagttatctgcgt
ctgttcttcatgtacacaaccagctctattctgggaccactccagatttcaatgggacag
atgctgcaagattttggaaaatttctgggcatgttcctcctcgttttgttctcgttcaca
attggattgacacaactttatgataaaggatttactgtaaatgaagaagaaagggactgt
gcgggtattttttgtgaaaagcagagcaacgacacattccattcgttcattggcacgtgc
tttgctttgttctggtatattttctcactggcacacgtagcaatctttgtcacgcgcttt
agctatggtgaagaattacagtcttttgtgggtgctgttattgttggcacctacaatgtg
gtggttgtgatagtactaactaaactcctcgtggcgatgcttcataagagttttcagctg
atagcaaatcatgaagataaggaatggaaatttgctcgtgccaaactctggcttagctat
tttgatgacaaatgcactctacctccgcctttcaatgtgattccatctcccaagactatc
tgttatcttttcaacagtctcagtaaatggatttgctctcatacatcaagtggcaaagtg
aaacggcagaatagccttaaggaatggaggaatctgaagcagaagagagatgagaattat
caaaaggtgatgtgttgcttagttcaccgttatttgacatccatgaggcaaaagatgcaa
agcacagatcaggcaactgtggaaaacctaaatgagctgaggcaagacttatcaaaattc
cgcaatgaaatgagagacctacttggctttcgaacttcaaaatatgctatgttttatcca
aggaattaa
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