Lagopus muta (rock ptarmigan): 125697407
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Entry
125697407 CDS
T09141
Symbol
RUBCN
Name
(RefSeq) run domain Beclin-1-interacting and cysteine-rich domain-containing protein isoform X1
KO
K19330
run domain Beclin-1 interacting and cysteine-rich containing protein
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125697407 (RUBCN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmut04131
]
125697407 (RUBCN)
Membrane trafficking [BR:
lmut04131
]
Autophagy
Other autophagy associated proteins
Others
125697407 (RUBCN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
RUN
Motif
Other DBs
NCBI-GeneID:
125697407
NCBI-ProteinID:
XP_048810524
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All DBs
Position
9:8960697..8987019
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AA seq
1151 aa
AA seq
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MSIFSRLSLLPLRVPAAAEDPDGNAAAPNALMAALRTTAAASQRPPPTDRERQVRMRGAR
TARAPQPPSEHRHLRHAHDACAATAPQPRERTPAPRKGAASSTPPARELARRPLAAGRSR
KEHWKLLGNLKTTVEGLVSTSNPNVWSKYGGLERLCRDMHSILYHGLIHDKVYCRQKDYW
QFVKDIRRLSPSSAHHLEKFISLHENSQPSPDSHSDQAIAQLWLQHSLQFHCLSAQLRPL
LENRQYIRKFYTDTAFLLSDAHVTAMLQCLEAVEQNNPRLLAQIDTSMLAGTSLPSVCSS
GPSAGTGEMCDHDAVGQQSRLPGALGCLDHLAESLLTRKGEGLSSVTKSQSLTALPGSFY
TLSPGCMQQHHCGSFSSLPHPASSGLSDRRPASSSISSSSSQPQEHCLASQSSSFSEGRS
PLEQPSAVPPSHIPSPKDPFSPANEMSSSTTSQSEDTWTGSQDESQSDANDGPEYLAIGN
LGRRGRACSTSSTSSSKSSSSNMFSSSSSQKLDSGDRGANGCGSRGLGLLRRSSFSEGQS
SVSQGVLKKSHLRSHSDTNVASGKLHGGLRDITIIIEDPVAESHSDTGGGRGMVSGSTQS
SELSTPSSLYMEYDSGQYLSSGEGMFRRPSEGQSLISYLSEQDFGSCADLEKENAHFSIS
ESLIAAIELMKCNMMSRQLEEEEEDSDKEIQELKQKIRIRRQQIRTKHMFSSCQEMGSDS
LVATDSESQFSSHGSTRLSDSGSAEDVEEYEIRDGNDGSNLIQMSKDGLSVSMASLFSDA
DIKRNPDSSRKSFLSSESISHSFGNSNSAEAVAMGLLKQFEGMQLPAASELEWLVPEHDA
PQKLLPIPDSLPVSPDDGEHADIYKLRIRVRGNLEWAPPRPQIIFNVHPAPTRKVAVAKQ
NYRCAGCGIRTDPDYIKRLRYCEYLGKYFCQCCHENAQTVIPSRILRKWDFSKYYVSNFS
KDLLSKIWSDPLFNVQDINPALYRKVKSLNQVWLLRIQLFHMKNMFKTCRLAKDLLDSFD
AVPGHLTEDLHLYSLSDLSATKRGDLVPRLTELLKAGSLHVEKCMLCQAKGFICEFCQNE
GDIIFPFELNKCKTCEECKACYHKSCFKSTRCPRCERLQARRELLAKQSMESYISDYEDD
ELEQQEAATAT
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcttctccagactgtcgctgctgccgctccgggtcccagcagcggccgaggat
ccggacggcaacgccgcggccccgaacgcgctcatggccgccctcaggaccaccgccgcc
gcctcccagcgaccgcccccaacggaccgcgagcggcaagtgcgcatgcgcggagcgcga
acggcgcgtgcgccgcaacccccctccgaacaccgtcatctcaggcacgcccacgacgca
tgcgcagcaacggctcctcagccgcgagagcgaacgcctgcgccgaggaaaggtgctgcc
tcttccacccctcccgcgcgggaattggcacggcgccccctggcggccgggaggagcagg
aaagagcactggaagctgctgggcaacctgaagaccacagtggaagggttggtgtccacc
agcaaccccaacgtctggtccaagtatggcggcctggagcggctctgcagggacatgcac
agcatcctgtaccatgggctcatccacgacaaggtgtactgcaggcagaaggattactgg
cagttcgtgaaggacatccgccggctgagtcccagctctgctcatcacctggagaagttc
atcagcctgcatgagaacagccagcccagcccagacagccacagtgaccaagctattgca
cagctgtggctgcagcacagcctgcagttccactgcctctcggcacagctcagacctctc
ctggagaacaggcagtacataaggaagttctacacagacacagccttccttctcagtgac
gcccacgtcacagccatgttgcagtgcctggaggctgtcgagcagaacaaccccaggctg
ctggctcagatcgacacatccatgctggctggcacatcactgccctccgtgtgctcctca
ggtccctctgctgggacaggagagatgtgtgaccacgatgctgtaggacaacagagccgc
ctgcctggggcactgggctgcctagatcatctcgctgagagcctgctgaccaggaagggt
gaaggtctgtcttcggtgacgaagagtcagagcctgactgcgctccctgggtctttctat
accctgtctccaggctgcatgcagcagcaccactgtgggtccttctccagcctgcctcac
ccggcctcctctgggctctcagacaggagaccagcaagctcctccatcagctcaagctcc
agccaaccccaggaacactgcctggcctcgcagtcctcctccttcagcgagggcaggtct
cctctggagcagcccagcgctgtccctccatcccacatcccctcacccaaagaccccttc
tctccagccaacgagatgagttccagcaccaccagccagagtgaggacacttggacaggg
agtcaggatgaatcacaaagcgatgctaacgatgggccggagtacctggccatcgggaac
ttggggcgccgtggccgggcctgcagcaccagcagcaccagcagcagtaagagcagcagc
tccaacatgttctcctctagcagctcccagaagctggactcaggggatcggggggcaaac
ggatgtggcagcaggggcctgggcctgttgcgccggtccagcttttcagagggacagtca
tcggtgtcgcagggcgtcctcaagaagagccacctgcgctcacactctgacaccaatgtg
gcttcggggaaattgcacggaggcctcagggatatcaccattataatagaagatccagtg
gcagaatcccattcagatacaggtggaggaagagggatggtctctggttccactcagagc
agtgaactgagcacgcccagctccctctacatggagtatgactctggccagtacctgagc
tcgggggaaggaatgttcagaagaccctcagaagggcagtccctcatcagttacctctct
gagcaggactttggcagctgtgcagatctggaaaaggagaatgctcactttagcatctca
gagtcactaattgctgctatcgagctgatgaaatgcaacatgatgagccggcagctggag
gaggaagaggaagacagcgacaaggagatccaggagctcaaacaaaagattcgcattagg
cgccagcagatccgcaccaagcacatgttctctagctgccaggagatgggctcagacagc
cttgtggcgacagacagtgagtcccagttcagctcccatggctccacgcgcctgtctgat
tcgggctctgcggaggatgtggaggagtacgagatccgagatggtaacgatggatctaac
ctgattcaaatgtccaaggacggcctctcagtgtcaatggcttccttgttctcagatgca
gacatcaagaggaaccctgactccagcaggaagtcctttctctcctcagagtccatatcc
cattcattcggcaattcaaactctgcagaagctgtggccatgggtttgctgaagcagttt
gagggcatgcagctgccagctgcctccgaattggaatggctggtccctgaacatgacgcc
ccgcagaagctcctgcccatccccgactctctgcccgtctctcctgatgacggagaacac
gccgacatctacaagctgaggattcgggtgcgtggaaacctggagtgggcccccccacga
ccacagatcatcttcaacgttcacccagccccaacgaggaaggtagctgtggccaagcag
aattaccggtgtgcaggctgtggcatccggaccgatcctgattacatcaagcgactgcgg
tactgtgagtacctggggaagtatttctgccagtgctgccacgagaacgcccagacagtc
atccccagccgcatcctgcgcaagtgggacttcagcaagtactacgtgagcaacttctcc
aaagacctgctgagcaagatctggagcgacccgctcttcaacgtgcaagatatcaatcct
gccctgtaccggaaggtgaagtctctcaaccaagtgtggctgctgcgaatccagctcttc
cacatgaagaacatgtttaagacctgccggctagctaaagatctcctggactccttcgat
gcagtgcctggccacttgacagaggatttgcatctctactctctgagtgacctcagtgcc
accaaaaggggggacctggtgcctcgcctgacagagctcctgaaggcaggcagcctgcac
gttgagaaatgcatgctgtgccaagccaaaggcttcatctgcgagttctgccagaatgaa
ggcgacatcatcttcccctttgagctcaacaagtgcaagacatgtgaagaatgcaaagcc
tgctaccacaagtcctgcttcaagtccacacgctgccctcgctgcgagcgactccaagcc
cgaagagagctgctggccaagcagagcatggaatcctacatctcagactatgaagatgat
gagctagagcagcaggaggcagcaacagccacctaa
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