Lagopus muta (rock ptarmigan): 125697605
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Entry
125697605 CDS
T09141
Symbol
USP13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lmut01002
]
125697605 (USP13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lmut04121
]
125697605 (USP13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lmut04147
]
125697605 (USP13)
Enzymes [BR:
lmut01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
125697605 (USP13)
Peptidases and inhibitors [BR:
lmut01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
125697605 (USP13)
Ubiquitin system [BR:
lmut04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
125697605 (USP13)
Exosome [BR:
lmut04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125697605 (USP13)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA_7
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_4
Motif
Other DBs
NCBI-GeneID:
125697605
NCBI-ProteinID:
XP_048810963
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All DBs
Position
9:6561058..6615929
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AA seq
864 aa
AA seq
DB search
MQRAALFGGGGGDAQMAAGDLGELLVPYMPTIRVPKSGDRVYKTECAFSYDSPDSEGGLY
VCMNTFLGFGREHIERHYRKTGQCVYLHLKRHVIEKVPGASGGALPKRRNAKLFLDLEAN
GDLSSDDFEYEDEAKLVIFPDHYEISLPNIEELPALVTIASDALLSAKSPYRKQDPDSWE
EELQASKHAKSLVQLDNGVRIPPSGWKCSKCDLRENLWLNLTDGSVLCGKWFFDGSGGNG
HAMEHYKETGYPLAVKLGTITPDGADVYSFDEEEPVLDPHIAKHLAHFGIDMLQMQVAEN
GLRDNDIKPRVSEWEVIQEAGMKLKPVYGPGYTGMKNLGNSCYLNAVMQAIFSIPEFQRA
YVGNLPRIFDYSPLDPTQDFNTQMAKLGHGLLSGQYSKPPMKSELIEQVMKEEHKPQQNG
ISPQMFKAFISKDHTEFSSNRQQDAQEFFLHLINLVERNPVGSENPSDVFRFLVEERTQC
CQSRKVRYTERVDYIMQLPVAMEAATNKDELIAYELKRREAEAARRAPPELVRAKIPFSA
CLQAFSEPSNVEDFWSSALQAKSAGVKTSRFASFPQYLVVQIKKFTFGLDWIPKKLDVSI
DMPDFLDINHLRAMGLQPGEEELPDIAPPIIIPEDPKDRMMNHFVESLDIDESSVMQLAE
MGFPLEACRKAVYYTGNLGAEVAFNWIIAHMEEPDFAEPLVVPVFGGAASSGVAGFGAVE
LDNQPPEEMVSIIISMGFQRSLAIQALKATNSNLERALEWIFSHPELEEEDGESALSMMD
LENHTNANILAEARSEGPRIKDGPGRYELFGFISHMGTSTMSGHYVCHLKKEGRWVIYND
LRVCASERPPKDLGYIYFYHRIPS
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgggccgcgctatttggcggcggcggtggcgacgcgcagatggcggccggggac
ctgggcgagctgctggtcccctacatgcccaccatccgcgtgcccaagtccggggaccgg
gtctacaagacggagtgcgccttctcctacgactctcccgattcagaaggaggtctctat
gtgtgcatgaacacgtttctgggatttggaagggaacacattgaaaggcattaccggaaa
acaggacagtgtgtatatttgcatctgaaacgacatgtgatagagaaggtaccaggggca
tctggtggagctttaccaaaaaggaggaatgctaagctatttttagatctagaggcaaat
ggtgatctgagcagtgatgactttgaatatgaagatgaagcaaaactcgttatatttcct
gatcactatgaaatctcattaccaaacatagaagagttaccagcactggtgacaatagct
tctgatgcacttctcagtgcaaaatcaccctataggaagcaggaccctgactcctgggaa
gaagagctacaggcatctaagcatgctaaatcgcttgtgcagttagacaatggtgttaga
attccccccagtggttggaagtgctcaaaatgtgatcttcgggagaatctgtggctgaac
ctgacagatggttcagtgttgtgcgggaagtggttctttgatggtagtggagggaatggc
cacgcaatggagcactacaaggagacgggttatcccctggcagtgaagttgggaaccatc
actcctgatggagcagatgtctattcctttgatgaagaggagccggtgttagatccccat
atagcaaagcatctggcacactttgggattgatatgctgcagatgcaagtggcagagaat
ggtctaagagataatgatataaaaccaagagtctctgaatgggaagtgattcaggaagct
ggtatgaaactcaagcccgtgtatggcccaggatataccggcatgaagaacctgggaaat
agctgctacctcaatgctgtcatgcaagccattttcagcatcccagagttccagcgagcg
tatgtgggaaaccttccgagaatattcgactactccccacttgatccgacacaagatttc
aacacccagatggctaaactgggacacggcctcctttcaggccagtattctaaaccaccc
atgaaatctgagcttattgaacaggtgatgaaagaagaacacaagcctcaacaaaatgga
atatctcctcagatgtttaaggcttttataagtaaagaccacacagagttttcctctaat
agacaacaagatgcacaggagtttttcctacatcttataaatctagtagagaggaatcct
gtaggttcagaaaaccccagtgatgttttccgtttcctggtggaagaacgcacgcagtgc
tgccagtccagaaaagtccgctacacagagagggtggactacatcatgcagttacctgtt
gccatggaggcagcaacaaacaaagatgaattaattgcatatgagctgaaaaggcgagaa
gcagaagctgcaaggagagctccaccagaacttgtccgtgccaagatcccatttagtgca
tgtttgcaggccttctctgaaccaagcaatgtagaggacttctggagcagtgcccttcaa
gcaaaatctgcaggagttaagacttctcgttttgcttcatttcctcagtacttggtggtg
cagataaagaaattcacctttggccttgactggatacccaaaaagcttgatgtttcaata
gacatgccagatttcctagatatcaaccaccttcgagccatgggtctccagccaggagaa
gaggaacttcctgacattgcacctcccatcatcattcctgaagacccaaaagatcgtatg
atgaaccattttgtggagtctctagatattgatgagtcttcggttatgcaactggcagag
atgggttttcctttggaagcgtgtcggaaagctgtgtactatacaggcaacctgggtgct
gaagtggctttcaactggatcattgcacatatggaagagccagactttgctgaaccattg
gttgtacctgtgtttggaggagctgcttccagtggtgtggctggctttggggctgttgaa
ttggataatcaacctcctgaagagatggtctccatcatcatttccatgggcttccaaagg
agcctagcaattcaagctctgaaggcaacaaacagtaacttggagcgtgcactggaatgg
atcttcagccaccctgaattagaggaggaagatggggagtctgctttgagcatgatggat
ttggagaatcatactaatgcgaatatccttgcagaggcaagatcagagggacccaggatc
aaagacgggcctggaaggtatgagctgtttgggttcatcagccacatgggaacatccaca
atgagtggtcactatgtttgccatctcaaaaaagaaggaagatgggtgatctacaatgac
cttagagtctgtgcctcagaacgacctcccaaagacctgggctatatttatttttaccac
aggataccaagttaa
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