Lagopus muta (rock ptarmigan): 125697609
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Entry
125697609 CDS
T09141
Symbol
SOX2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lmut03000
]
125697609 (SOX2)
Transcription factors [BR:
lmut03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
125697609 (SOX2)
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
125697609
NCBI-ProteinID:
XP_048810982
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All DBs
Position
9:7125622..7127040
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AA seq
315 aa
AA seq
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MYNMMETELKPPAPQQTSGGGTGNSNSAANNQKNSPDRVKRPMNAFMVWSRGQRRKMAQE
NPKMHNSEISKRLGAEWKLLSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKK
DKYTLPGGLLAPGTNTMTTGVGVGATLGAGVNQRMDSYAHMNGWTNGGYGMMQEQLGYPQ
HPGLNAHNAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYSQQGTPGMALGSMGS
VVKTESSSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMSQHYQSAP
VPGTAINGTLPLSHM
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggaaaccgagctgaaacctcccgccccccagcaaacttcgggggga
ggcacaggcaactccaactcggccgcgaacaaccagaagaacagcccggaccgggtcaag
cgccccatgaacgccttcatggtttggtcccgcgggcagcggcggaaaatggcccaggag
aacccgaagatgcacaactcggagatcagcaaacggctcggggccgagtggaaactttta
tccgaggcggagaagagacccttcattgacgaagccaaacggctccgagctctgcacatg
aaggagcacccggattataaataccgaccccggaggaaaaccaagaccctgatgaagaag
gataagtacacgttgccagggggcttactggcgccgggcaccaataccatgacgaccggg
gtaggggttggggccaccttgggagctggggtgaaccagaggatggacagttatgcgcac
atgaacggctggaccaacggaggctatgggatgatgcaagagcagctcggctacccgcag
cacccgggcttgaacgcgcacaacgcggcgcagatgcagcccatgcaccgctacgacgtg
agcgccctgcagtacaactccatgaccagctcgcagacgtacatgaacggatcgcctacc
tacagcatgtcgtactcccagcaagggaccccgggcatggccctgggctccatgggctcg
gtggtcaagacggaatccagctccagtccccccgtagtcacctcctcgtctcattcgagg
gctccttgccaagccggggaccttcgggacatgatcagcatgtatctaccaggtgctgaa
gtaccagaaccagctgccccaagcagacttcatatgtcccaacactaccagagtgcacct
gttcctggcacagccattaatggcacactccctctatcacatatgtaa
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