KEGG   Lagopus muta (rock ptarmigan): 125697718
Entry
125697718         CDS       T09141                                 
Symbol
TRIM42
Name
(RefSeq) tripartite motif-containing protein 42
  KO
K12018  tripartite motif-containing protein 42
Organism
lmut  Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:lmut00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:lmut01009]
    125697718 (TRIM42)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lmut04121]
    125697718 (TRIM42)
Protein phosphatases and associated proteins [BR:lmut01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     125697718 (TRIM42)
Ubiquitin system [BR:lmut04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    125697718 (TRIM42)
SSDB
Motif
Pfam: fn3 zf-B_box Ig_DSCAM-DSCAML_C Pur_ac_phosph_N
Other DBs
NCBI-GeneID: 125697718
NCBI-ProteinID: XP_048811211
LinkDB
Position
9:complement(17514098..17521909)
AA seq 789 aa
MDENGCTFSACPCFSNCCYLTCHRRKKECCLCWRFLFTSEQNCSCFPCPYEEDKPYQCCH
CSCSEHANCWWCCCSCSNDPDCKCCCCGGENSACQYYASKCCGKSVYDQQQSRAPGTVQS
TDVMSRLRTRNKARVSVPERKGSNQAFRDQLACPLCKQLFLQPFMLPCNHCICEKCIIKT
KTKAEATENYYIIICPVCNKAHCLPNTNKIQLRKNYLKAKLAKKYMRRHGILKWRFDHSE
RPVYCETCRERRRVATKRCRTCGINMCSECLHLYHTESGAQDHIFTSTCQEDNEQWACLL
HCNSHLSEYCLDDHKLICGFCKNSLHNDHETIPLAAACSREAASLSNTIVKFKQARQGID
NDLMEVTLLKNNFQASKDLQRKEIRNGFLKLHTVLHEQEKEMMELLENTELKKQKDISEY
INYTFNQLSYMDGLIQYAEEALKEESQVVFLQSAHCLVKEIEDAIPSIFQPRPHIREDPL
RELQFKFDELFAILQGFSPTLSETKQLESKGDKHPCSFNPEIMVPRHVSSIHEAKQSTML
QSASLNSLLELGMPIESTLGRPNSTPPHHSTQSNKMCAFWDAACETSRKERKYQIVNFPS
SEPMEKESFAAPGPVVIYQTVVYPRSAKIYWTCPIEDVDFFEVEFYEVVGIGPDNTVCTQ
LDGKLSKIQQQNLEIRNLDSNTEYLFKVRAVNKSGQGEWSESCKIITSGEHKIIQDRWRT
ENSMQAMSTTWESTQELQASELHLCAWEDHRTEPPGRDAKAHVRRGDDLGQAGWLHKGHI
RPEQYGGFL
NT seq 2370 nt   +upstreamnt  +downstreamnt
atggatgaaaatggatgtaccttttcagcctgcccatgcttctcaaactgctgttatcta
acttgccacagaagaaagaaggaatgctgcctgtgttggcgcttcctatttaccagtgag
cagaactgcagctgtttcccatgcccgtacgaagaagacaaaccttaccagtgctgccac
tgctcatgttcagagcacgcaaattgctggtggtgctgctgctcttgctcaaatgaccca
gactgcaaatgctgctgctgtggtggagagaattcagcatgccaatactatgcaagcaaa
tgctgcggaaaatctgtctatgaccaacagcagtcaagagcaccagggactgttcagtca
acagatgtcatgtcaagattaagaactagaaataaagcacgtgtgagtgtaccagaaagg
aaaggctccaaccaggcttttcgtgatcagcttgcctgtccactgtgcaaacagttattt
ctccagccgtttatgctgccatgcaatcactgcatttgtgagaaatgcataataaaaacc
aagaccaaagctgaagcaacagaaaactattatatcatcatatgcccggtatgtaacaaa
gctcactgtctccctaacacaaacaaaattcagctgaggaagaattaccttaaagcaaaa
ctggccaagaaatacatgcgcagacacggcattctgaaatggagatttgaccacagtgaa
agaccagtctattgcgaaacttgcagggagagaagaagagtggcaactaaaagatgtaga
acatgtggaattaacatgtgcagtgaatgtttgcatttatatcatactgagagtggtgct
caagaccacatattcaccagcacgtgtcaagaagataacgaacagtgggcatgcttacta
cactgcaactcacacctctcagaatactgtctggatgaccacaaactgatctgtggtttc
tgcaagaattcgctgcacaatgatcatgagaccattcccttggcagctgcatgttcaaga
gaggctgcttctctctccaatacaatcgtaaaatttaaacaagcacgccaaggaattgat
aatgatctaatggaagttaccctgctaaaaaataatttccaagcctccaaggatctccaa
aggaaggagatcagaaatggattcttaaaactacatacggtgctacatgaacaagaaaaa
gagatgatggagttgcttgaaaacaccgaactcaaaaaacagaaagacatttcagaatac
ataaactatacattcaaccagctctcatatatggatggccttatccagtatgctgaagag
gctcttaaggaggaaagtcaagttgtatttctgcaatctgcacactgtttggtgaaagaa
atagaagatgcaattccttccattttccagcctagaccacatatccgagaagatccctta
agggaactgcaattcaaatttgatgaactgtttgccattttacagggattttcaccaacc
cttagtgaaacaaaacagttagaaagtaaaggagacaagcatccctgttcttttaaccca
gaaataatggttccaaggcatgtttcaagcattcatgaagccaagcaatcaacaatgctc
caaagcgcatccttaaattccttgcttgaattaggcatgccaattgaaagcactcttggg
agaccaaactctacacctccccatcattctacacagagtaataaaatgtgtgcattttgg
gatgcagcttgtgaaacttcaagaaaagaaaggaaatatcagattgttaactttccaagt
tcagaacctatggaaaaagaatcattcgcagcgccaggacctgttgttatataccagact
gttgtttacccaaggtctgccaaaatttactggacttgtcctatagaagatgtggatttc
tttgaggtagaattttatgaagttgttggtattggtcctgataacactgtctgcacacaa
ctggacggcaagctaagcaaaatacagcagcagaaccttgagatacgtaatctggattca
aatacagaatatcttttcaaagtccgtgctgtcaataaaagtggtcaaggagaatggagt
gagagctgtaagataattacttcaggtgaacacaagataatccaagacagatggaggact
gagaatagtatgcaggccatgtcaaccacatgggaatctacccaggaactgcaggccagt
gagcttcacctctgtgcttgggaagaccatagaacagaacctcctggaagagatgctaag
gcacatgtaagacggggagatgatctgggacaggcaggatggctccacaaagggcacatc
aggcctgaacaatatggtggctttttatga

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