Lagopus muta (rock ptarmigan): 125697824
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Entry
125697824 CDS
T09141
Symbol
SHOX2
Name
(RefSeq) short stature homeobox protein 2 isoform X1
KO
K09331
short stature homeobox protein
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lmut03000
]
125697824 (SHOX2)
Transcription factors [BR:
lmut03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
125697824 (SHOX2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
MRP-L20
KBP3
AcrF31
Motif
Other DBs
NCBI-GeneID:
125697824
NCBI-ProteinID:
XP_048811415
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Position
9:complement(1386416..1390591)
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AA seq
300 aa
AA seq
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MEELTAFVSKSFDPKAKEKKELITYREVLESGPLRGAREPGGTAAEPGRDETGSPAGRAG
GGRSPPREPDAAAERAADAATPKLSDVSPELKERKEDAKGMEDEGQTKIKQRRSRTNFTL
EQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQLHKGVLIG
AASQFEACRVAPYVNVGALRMPFQQASRCHSRPRGSQVQAQLQLDSAVAHAHHHLHPHLA
HAPYMMFPAPPFGLPLATLAESASAASVVAAAAAAKTTSKNSSIADLRLKAKKHAAALGL
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgacggcgttcgtctccaaatcgtttgatcccaaagcgaaggagaagaag
gagctcatcacctaccgcgaggtgctggagagcggacccctgcgcggagcccgggagccc
ggcggaaccgcggcggagccgggccgggacgagacgggcagcccagcggggcgggcgggc
ggcggacgctccccgccgcgggaacccgacgccgccgccgagagagccgccgacgcggcc
accccgaagctgagcgacgtgtccccggagctgaaagagcgcaaggaggatgcgaaaggc
atggaagacgaagggcagacgaaaatcaagcagcggagaagcagaacaaatttcaccctg
gagcagctgaacgagctggaaaggcttttcgacgagacccactacccggacgccttcatg
cgggaggagctgagccagcggctggggctgtccgaagcccgagtgcaggtttggttccaa
aacagaagagccaaatgccgaaagcaagaaaaccagctgcacaaaggagtgctcataggg
gccgccagccagttcgaagcctgccgggtggccccttacgtcaacgtgggagcgctgcgg
atgcccttccagcaggcaagtcggtgccactcgcggccgcgtggctctcaggttcaggcg
cagctgcagctggacagcgccgtggcccacgctcaccaccacctccacccgcacctggcc
cacgcgccctacatgatgttccccgctccgcccttcgggctcccgctcgccactttggcc
gagtccgcttccgccgcctccgtggtggccgccgccgccgccgctaagacgaccagcaag
aactcgagcatcgccgacctgcggctgaaggccaagaagcacgcggccgccctggggctg
tga
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