Lagopus muta (rock ptarmigan): 125697865
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Entry
125697865 CDS
T09141
Symbol
COPB2
Name
(RefSeq) coatomer subunit beta'
KO
K17302
coatomer subunit beta'
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmut04131
]
125697865 (COPB2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lmut04147
]
125697865 (COPB2)
Membrane trafficking [BR:
lmut04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
125697865 (COPB2)
Exosome [BR:
lmut04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
125697865 (COPB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_SCAP
PEP5_VPS11_N
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_LRRK2
Beta-prop_WDR35_TULP_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
125697865
NCBI-ProteinID:
XP_048811541
LinkDB
All DBs
Position
9:18042210..18056403
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AA seq
913 aa
AA seq
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MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD
MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG
REEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESNSVVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILKYLSEKVASAQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNANMVNKLAEGAE
KDGKNNVAFMSYFLQGKLDSCLELLIKTGRLPEAAFLARTYLPSQVSRVVKLWRESLSKV
NQKAAESLADPTEYENLFPGLKEAFVAEEYVKQSLADLRPAKEYPLVTPNEERNLLEEAK
GFEPSGVMASQKKTEEAVPSPKPEVMNTVLQNSDLLPPRDQKTLLDLEDDLDNLDLEDID
TTDINLDEEILDD
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgcctctccgactcgatatcaagcgaaagctaacagcccggtctgaccgggtgaaaagt
gtggacctgcaccccacagagccatggatgctggcaagtctctacaatggcagtgtctgt
gtttggaaccatgaaacacagactttggtgaagacttttgaagtatgtgacctgccagtg
agagctgccaaatttgtggcaaggaagaactgggttgttacaggagctgatgacatgcaa
attagagtttttaattacaacaccctggaaagagtgcacatgtttgaagcacactcagat
tacattcgttgtattgctgtacatcccacgcagcctttcatactgaccagcagtgatgac
atgctgattaaactctgggactgggataagaaatggtcttgttctcaagtgtttgaagga
catacccattatgtcatgcagatcgtcataaacccaaaagataataatcagtttgccagt
gcctctttggataggacaatcaaggtgtggcagcttggctcctcttcacccaactttact
ctggaaggccatgagaaaggggtaaactgcattgactactacagcggaggagacaagccg
tacctcatttcgggggcagatgaccggttggttaagatctgggactaccagaacaaaaca
tgtgtacaaacactggaaggacatgctcagaacgtgtcttgtgtcagcttccatcctgaa
ctgcctatcatcatcacaggctcagaagatggaactgtgcgcatttggcattctagcacc
taccggctggaaagtacgctcaactatgggatggagagagtgtggtgtgtggccagtttg
aggggatccaataatgtggctttgggctatgatgaaggcagcatcattgttaagcttggt
cgtgaagaaccagccatgtccatggatgcaaatggaaaaatcatttgggctaaacattca
gaagtccagcaggccaacttgaaagctatgggagatgctgaaattaaagatggagaaaga
ttgccactggctgtgaaggacatggggagctgtgaaatatatcctcaaacaattcaacac
aaccctaatggacggtttgttgtagtgtgtggtgatggtgaatacatcatttacacagct
atggctttgaggaacaagagttttggttctgcacaggagttcgtatgggcacatgattca
tcagaatatgcaatcagagagagcaacagtgttgtaaagatatttaaaaacttcaaggag
aagaaatcattcaaacctgattttggagcagaaggcatctatggtggcttcctgctggga
gttagatctgttaatggtttggcattctatgattgggagaacacagaactgatccgcaga
attgaaattcagcccaaacatattttctggtctgactcgggtgagcttgtctgcattgct
acagaagagtcattcttcattctgaaatatctatcagaaaaagttgcatctgcccaagaa
acacacgaaggagtcactgaagatggaattgaagatgcatttgaggttcttggtgagatt
caggagattgtgaaaacaggtttgtgggttggcgactgctttatttacaccagctctgtg
aacagactcaactactatgttggaggagaaattgtcacaattgcccatttagacaggacg
atgtatctcttggggtatattcctaaggacaaccgactgtatttgggtgataaagagcta
aacattgttagctactctttgctggtctcagtgcttgaatatcaaactgctgtgatgaga
agagacttcggaatggctgacaaagttcttcccacaattccaaaagagcagagaaccaga
gttgcgcattttcttgaaaaacagggcttcaaacaacaagctcttgcagtatctacagat
ccagagcatcgttttgaacttgctcttcagctgggagaattaaaaattgcttatcagctt
gcagtagaagcagagtcagaacagaagtggaagcaacttgctgaacttgccattagtaaa
tgccagtttggcctggcccaggagtgtctccaccatgcacaagactatggaggactactt
ctactggctacagcctcaggaaacgcaaacatggtgaataaattagctgaaggagcagaa
aaagatggcaagaacaacgtcgcatttatgagctacttcctgcagggaaagcttgactcg
tgtttggaactcctgatcaaaaccggacgtctcccagaagctgcttttcttgcacggacc
tatttgccaagccaagtttcaagggttgttaaactgtggcgggagagtctctctaaagtt
aaccagaaagctgctgaatctcttgctgaccctacagaatatgaaaatcttttccctgga
ttaaaggaagcttttgttgctgaagaatatgttaaacaaagtcttgctgacctgcggccc
gccaaggaatacccccttgtcactccaaatgaagaaagaaacttacttgaagaagcaaaa
ggctttgaaccatcgggagtaatggcatctcagaaaaagacagaagaagcagttccatct
cctaaaccagaagtgatgaatacagtactgcagaattctgatctgcttccaccacgagat
caaaagacacttctggatttggaagacgacctcgataacttagacctggaggatattgat
accacagatatcaatctggatgaagagatcttagatgactga
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