Lagopus muta (rock ptarmigan): 125697897
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Entry
125697897 CDS
T09141
Symbol
TRIP12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125697897 (TRIP12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lmut04121
]
125697897 (TRIP12)
Enzymes [BR:
lmut01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
125697897 (TRIP12)
Ubiquitin system [BR:
lmut04121
]
Ubiquitin ligases (E3)
HECT type E3
125697897 (TRIP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
HEAT_2
UNC45-central
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
125697897
NCBI-ProteinID:
XP_048811595
LinkDB
All DBs
Position
9:13855368..13923415
Genome browser
AA seq
2065 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDAAGGRSHLGQAKHKAHSPPESRKSISKTPKVQ
SNTTSEQSKGHFSKRGCSSSAVLIPQEDSERVSTSEKQKTGQVPKKDNSRGVKRSASPDY
SRTNSPSSAKKPKALQHAETSSESNKPHTKSKRRHLDQEQQKSTQLPSTSKAHTRKGGAA
GSSRSQKRKRTESTSCIKSRSAVESTGAEEKSAKSSKLASKSVTSAKAGCSTITDSSSSA
STSSSSSAIASASSTVPQGARVKQGKDQNKARRSRSASSPSPRRSSRDKEQSKTGGSSKF
DWAARFSPKVSLPKTKLSLPGSSKSETSKPGPSGLQAKLASLRKSTKKRSESPPAELPSL
RRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPDNNQDGVNSSAARTDEAPQGA
AASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGSG
ASSKAQQLLQGLQATDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHN
FDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRRHS
KAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLTHQ
DKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNIQQLLVVTPPILSSGMFIMVVRM
FSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQEQIDLVPRSPQELYELTSLICEL
MPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEAAHQVGEDEI
SLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANTNTSGHSELKKDDARAQLMKED
PELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNHAVSSHI
ASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKNLAESEALLTSPPKVC
TNGSGTLGTTTTISTGTATAATNAAADLGSPSLQHSREDSLDLSPQGRLSDVLKRKRLPK
RGPRRPKYSPPRDDDKVDNQAKSPTTTQSPKSSFLASLNPKTWGRLSTQSNSNNIEPART
AGVSGLARTASKDTISNNREKIKGWIKEQAHKFVDRYFSSENMDGSNPALNVLQRLCTAT
EQLNLQVDGGTECLVEIRSIVSESDVSSFEIQHSGFVKQLLLYLTSKSEKDAVSRDIRLK
RFLHVFFSSPLPGEEPLGRLEPLENAPLLALVHKMNNCLSQMEQFPVKVHDFPSGNGTGS
SFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPVKIDPLALVQAIERYLVVRGY
GRVREDDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIGDHLLPYNMTVYQAVKLYS
LQAEEERESTDDESNPLGRAGIWTKTHTIWYKPVREDEDGNKDCVGGKRGRAQTAPTKTS
PRNSKKHDELWHDGVCPSVLNPLEVYLISTPPENITFEDPSLDVILLLRVLHAISRYWYY
LYDNAICKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLTELGKTCPFFFPFDTR
QMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTVNRDELLKQAESVMQ
DLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLANPKGSQEGT
KYIHNLQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLPFYKWML
RQETSLTSHDLFSIDPVVAKSIYHLEDIVRQKKRLEQDKTQTKESLQYALETLTMNGCSV
EDLGLDFTLPGFPNIELKKGGKDTPVTIHNLEEYLRLVIFWALNEGVARQFDSFRDGFES
VFPLSHLQYFYPEELEQLLCGSKTDTWDAKTLMECCRPDHGYTHDSRAVKYLFEILSSFD
SEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLPD
YSTIEIMREKLLIAAREGQQSFHLS
NT seq
6198 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gctggggcccagccacaagacgacgcagcaggaggaaggtcacatttagggcaggcaaaa
cataaggcacatagccctcctgagagtagaaaatctatttcaaagacacccaaagtgcag
tctaatactacttctgagcagtccaagggacacttttctaaaagaggctgtagttcatct
gctgttctaattccacaagaagattcagaaagagtcagtacttcagaaaagcaaaaaacg
gggcaagtgcctaagaaagacaattctcgaggagttaaacgcagtgctagtccagattac
agcaggaccaattctcctagctctgctaaaaaacctaaagcacttcaacacgccgaaact
tcctcggaaagtaacaagccacatactaaatccaagagaagacacttagaccaagaacag
cagaagtctacacaattgccatcaacaagcaaggctcacaccagaaagggtggagctgct
ggtagctcccgaagtcagaaaaggaaaaggacagagagtacgtcttgtataaagagtcgc
tcagcagttgaatcaactggcgctgaagagaagtcagcaaaatcctccaagctggcttca
aaatcggtgacctcagccaaagctgggtgtagcaccatcactgattcttcttcttcagct
tctacatcctcttcctcttctgctattgcctctgcttcttccactgttcctcagggtgcc
agagtgaaacagggtaaggaccagaataaggctagacgttcacgttctgcgtccagccct
agtccaagaaggagcagcagggacaaagaacagagcaaaacaggtggctcttcaaagttt
gactgggctgctcgattcagtccaaaagttagtctccctaaaacaaaactgtctctacca
ggctcttctaagtcagagacctcaaaacctggaccttcaggactgcaggctaagctagca
agcctaagaaaatccacgaagaagcgcagtgaatcaccacctgctgagctccccagtttg
cggcggagcacacggcaaaagaccacgggctcctgtgctagtaccagtcggcgaggctct
ggcctgggcaaaagaggagcagctgaagctcgccgacaggagaagatggctgatcctgac
aacaaccaggatggagttaactcttcagctgcacgtacagatgaggctccccagggagct
gcagcttctagctctgttgctggggctgtaggtatgacaacatctggagaaagtgagtca
gatgactctgagatgggaagactacaagctctgttagaggctaggggtcttcctcctcac
ctgtttggccctcttggtcctcggatgtcgcaactcttccacaggacaattggaagtgga
gctagttctaaagcccagcagcttttacaaggtctccaagccactgatgaaagtcagcaa
ctacaggcagtaattgagatgtgccagctgttggtcatgggaaatgaagaaacgctggga
ggatttccagtcaagagtgttgtgccagctttgataacattgctgcagatggagcacaac
tttgacattatgaaccatgcttgtcgagccttaacatacatgatggaagcacttcccaga
tcatctgctgtagtggtagatgcaattcctgtcttcttggaaaagctgcaagttattcag
tgcattgatgtggcagagcaggcactgacagccctggagatgctatcgcgcaggcatagt
aaagccattctgcaggcaggtgggttggcagactgtttgctatatctggaattcttcagt
ataaatgcgcagaggaatgcactagctattgctgccaattgctgccagagtataacacct
gatgagtttcactttgtggcagactctttgccattgcttacacaaaggttaacccatcag
gacaaaaagtctgttgaaagcacttgtctctgttttgcacggctggtagacaatttccag
catgaggagaacttgctgcagcaggttgcttccaaggacttgttaacaaacatccagcaa
cttttggtagtgacacctcctatcctgagctcaggaatgttcatcatggtggtgcgcatg
ttttccttaatgtgttccaattgtccaacgcttgcagtccaacttatgaagcaaaacatt
gcagaaacacttcactttctcctttgtggagcctcaaatgggagttgtcaagaacaaatt
gaccttgttccacgaagtcctcaagaactctatgagcttacttctcttatctgtgaactg
atgccttgtctgccaaaagaggggatatttgctgttgatactatgctaaagaaaggaaat
gcacagaatacagatggtgcgatatggcaatggagagatgacaggggtctctggcatccc
tataacaggattgatagtcgaataatagaggcagctcatcaggttggtgaagatgagatt
agtctgtcgacgcttggacgtgtctatactattgattttaactctatgcagcaaataaat
gaggatactggaacagcacgtgccattcagcggaaaccaaaccctttagccaatacaaac
actagtggacattcagaattgaagaaggatgatgctcgagcacaactaatgaaagaagac
ccagaattggcaaaatcctttatcaaaacactgtttggtgttctttacgaagtgtatagt
tcttcagctggacctgctgttagacacaagtgccttagagcaatacttagaataatttat
tttgctgatgctgaactcctgaaggatgtgctgaaaaaccatgctgtgtcaagtcatatt
gcctccatgctgtcaagtcaagaccttaagatagtagttggagccctgcagatggcagaa
atcttaatgcaaaagctacctgacatttttagtgtttacttcagaagagaaggagtgatg
catcaagtgaaaaacttagcggaatctgaggctttgctaacgagcccaccaaaggtatgc
actaatggatcaggaacgctgggtaccactacaactataagtactggaacagccactgct
gccactaatgcagctgcagatttgggctctcccagcttacagcacagccgggaggattct
ttggatctgagcccacagggacgactgagtgatgttctaaagagaaaaagactgccaaaa
cgggggccaaggagaccaaaatattctcccccaagagatgatgacaaagtagacaatcaa
gcaaaaagtcctacaactactcaatctcctaaatcttccttcttagcaagtttaaatcct
aaaacatggggaagattaagtacacagtccaacagtaataacattgaaccagcacgaaca
gcaggtgtaagtggtcttgcaagaactgcttccaaggatacaatttccaataacagagaa
aaaattaagggttggattaaggagcaagcccataaatttgtagatcgttattttagttcg
gaaaacatggacggaagcaatcctgcactaaatgtattacagagactttgcactgcaact
gaacaacttaacctccaggtggatggtggaacagagtgccttgtagaaatccgtagcatt
gtctcggagtctgacgtctcctcatttgaaatccagcatagtggatttgtgaaacaactg
ctgctttatttgacatctaaaagtgaaaaagatgctgtaagcagggatatcagattgaaa
agatttcttcatgtatttttctcctctccacttcctggagaagaaccccttggaagatta
gagccattagaaaatgcacctttgttggcattagtccataaaatgaacaattgcctcagt
cagatggagcagtttccagtgaaagtgcatgacttccccagtggaaatggaacagggagc
agtttttctcttaacagaggatctcaagctttaaagttcttcaatacacatcagttaaaa
tgccagctgcaaagacatccagactgtgctaatgtgaaacagtggaaaggtggacctgtg
aagattgatcctctggctttggttcaagccattgaaagatatcttgttgttagaggttat
ggaagagttagagaagatgatgaggatagtgatgatgatgggtcagatgaagaaatagat
gaatctttggctgctcaattcttaaattcagggaacgtgagacatagattgcagttttac
attggggatcacttgctaccatataatatgactgtgtatcaagcagttaagctgtacagt
ttgcaagctgaggaggaaagggaatcgactgatgatgaaagcaacccattaggaagagct
gggatttggacaaaaacacataccatttggtacaaacctgtacgggaggatgaagatggt
aacaaagactgcgttggtggtaaaagaggaagagctcaaactgctcccacaaaaacctca
cctaggaattctaaaaagcatgacgaattgtggcatgatggtgtatgcccttcagtattg
aatcctttagaagtttacctcatatctactcctcctgaaaacataacatttgaagatcct
tcattagatgttattcttcttttgagagttttacatgctatcagtcgatactggtattat
ttgtatgataatgcaatatgcaaggagattattccaacttcagaatttatcaacagtaaa
ctgacagcaaaagcaaatagacagcttcaagatccactggtaattatgacaggaaacata
ccaacttggctgacagaacttggaaaaacatgcccatttttctttccatttgatacccga
caaatgctgttttatgtaactgcttttgatcgtgatcgagccatgcaaagactactggat
actaatccagaaatcaatcaatcagattctcaggatagcagagtggcaccacgactggac
aggaaaaaacgcactgtgaacagagatgagctgttgaaacaggcagaatctgtgatgcag
gatctaggcagttcaagagccatgttggaaatccagtatgagaatgaagttggcacaggc
ctgggccctacactagagttctatgcacttgtatctcaggaactacagagagcagactta
ggcctttggaggggagaagaagtaactttagccaatccaaaaggaagccaagaaggtacc
aagtatattcataatctgcaaggcctttttgcacttccttttggtagaacagccaagcca
gctcacattgcaaaagttaaaatgaagttccgctttctgggaaaactaatggctaaggca
atcatggattttagactggtggatcttcctcttggacttcctttttataaatggatgtta
cgccaggaaacttctttgacgtctcatgacttgttcagtatcgatccagtagtagccaaa
tcaatatatcaccttgaagatattgtaagacaaaagaaaagacttgagcaggacaaaaca
cagaccaaagaaagtctacagtatgcattggaaactctgactatgaatggctgctcagtg
gaggatctcgggctggatttcacacttcctggatttcctaatatagagctgaaaaaaggg
ggaaaagatacaccagtcaccatccacaatttggaggagtatctcagattggttatattc
tgggcacttaatgaaggtgttgccagacagtttgattctttcagagatggatttgagtca
gtcttccccctcagtcatcttcagtacttctatcctgaggagttggagcaactcttatgt
ggcagcaaaacagacacatgggatgccaagaccttaatggaatgttgcaggccagatcac
ggttatacacatgacagtcgagcagtgaagtatctctttgaaattctcagtagctttgat
agtgagcagcagagactgtttcttcagtttgtgactggtagtcccaggctgccagtagga
ggctttcgaagtttgaatcctccattgacaattgtacggaagacatttgagtctacagag
aatcctgatgacttcttgccctcagtaatgacttgtgtgaactatctcaaattgccggac
tattcaactattgagataatgcgtgaaaaacttttgatagctgcaagagaagggcagcag
tcattccatctttcctga
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integrated database retrieval system
