KEGG   Lagopus muta (rock ptarmigan): 125697969
Entry
125697969         CDS       T09141                                 
Symbol
SKIC8
Name
(RefSeq) WD repeat-containing protein 61
  KO
K12602  WD repeat-containing protein 61
Organism
lmut  Lagopus muta (rock ptarmigan)
Pathway
lmut03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lmut00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    125697969 (SKIC8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lmut03019]
    125697969 (SKIC8)
Messenger RNA biogenesis [BR:lmut03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     125697969 (SKIC8)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40 Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_WDHD1_1st WD40_MABP1-WDR62_2nd WD40_CDC20-Fz WDR55 Beta-prop_WDR36-Utp21_2nd WD40_Gbeta EIF3I Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_EML Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_WDR19_1st Beta-prop_ACSF4 Beta-prop_Aladin Beta-prop_VPS8 Beta-prop_Vps41 WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_NWD2_C Beta-prop_EIPR1 Beta-prop_WDR41 Beta-prop_DCAF4 PROPPIN Tricorn_2nd Beta-prop_HPS5 Beta-prop_Nup120_160 Beta-prop_SPT8 Beta-prop_IFT140_1st NBCH_WD40 Cytochrom_D1 Ge1_WD40 Beta-prop_WDR75_2nd Beta-prop_DCAF12 Beta-prop_NUP159_NUP214 VPS8_N WDR54 WD40_like WD_LRWD1 DUF2415 Vgb_lyase Beta-prop_IFT122_2nd Beta-prop_pof12 Chorion_S16 Nse4-Nse3_bdg
Other DBs
NCBI-GeneID: 125697969
NCBI-ProteinID: XP_048811629
LinkDB
Position
10:complement(16657972..16666716)
AA seq 305 aa
MTTQYGILFKQEQAHDDAIWSVAWGKNKKDGSETVISGSLDDLVKVWKWNDEKLDLQWTL
EGHQLGVVSVDISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSPDSQF
LATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG
KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAF
CPDDTHFVSSSSDKSVKVWDAGTRTCVHTFFDHQDQVWGVKYNGSGSKIVSVGDDQEIHI
YDCPV
NT seq 918 nt   +upstreamnt  +downstreamnt
atgaccacacagtatggtattctcttcaagcaagaacaagctcatgatgatgccatctgg
tcagttgcctggggaaagaataaaaaagatggttctgaaactgtgatctctggttctttg
gatgatctcgtgaaggtctggaagtggaatgatgaaaaattggatctacaatggacgttg
gagggtcaccagctaggtgtggtgtctgtggatatcagccacacgggttccatcgcagca
tccagctccctagacgcccacattcgcctttgggatttagaaactggcaaacagatcaag
tcaatagatgctggccctgttgatgcttggtccctggctttttcacctgattcccagttc
cttgcaacaggaagtcatgtgggaaaagtaaatattttcggtgttgaaactggaaaaaaa
gaatattctctggacactagaggaaagttcatccttagcattgcatatagcccagatgga
aaatacttagccagtggagcaatagatggcattatcaatatttttgatattgcaactgga
aaacttttgcacacgctagaaggtcatgcgatgcctattcgttccctgacattttctcca
gactctcagttacttgtaacggcttcagatgacggctacatcaaaatctacgatgtacag
catgccaacttggctggcacactgagcggtcatggatcctgggtattaaatgtagcattt
tgtcctgatgatacccactttgtttccagttcatctgataaaagtgtgaaagtttgggat
gctggaacaagaacctgcgttcatactttctttgaccaccaagaccaggtttggggtgtg
aaatataatggaagtgggtccaaaattgtgtctgttggagacgaccaagaaatccatatt
tatgactgtcctgtttaa

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