Lagopus muta (rock ptarmigan): 125697997
Help
Entry
125697997 CDS
T09141
Symbol
THSD4
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4 isoform X1
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
125697997 (THSD4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lmut04990
]
125697997 (THSD4)
Domain-containing proteins not elsewhere classified [BR:
lmut04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
125697997 (THSD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
TSP_1
ADAMTS_CR_3
TSP1_spondin
PLAC
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
125697997
NCBI-ProteinID:
XP_048811706
LinkDB
All DBs
Position
10:complement(13806628..14092979)
Genome browser
AA seq
1026 aa
AA seq
DB search
MVDSLIVSLRLLSSLAVLGFQFVIPQPSIEHRKVPQRIEEQRDASEDSGAGIPGMWGSWG
PWSACSRSCSGGVMEQTRPCLPAYYRERGYQRPGRPYAASERTLAHQSSRHQDSLSAYPG
HVISAIRTSVPLHRNEEQLRAGLRASAASEGHNNSHMSRGAPRGSRHSQSQRHHPKAEKR
SRNRNPIGPGKYGYGKVPYILPLQTDTGQQPQKLRRQRQSSRNNVFHQSPSLINTYSQPA
SPSLQHGNLYQEEGGPQAGHQVLGPSVYQSSSFPVSQNLFHSSDSTLHGSASHLMVQGQP
QPQRAAAIVCVGTYKQYKLCNTNTCPESSRSIREVQCASYNNKPFMGRFYEWEPFAEVKG
SQKCELNCRAIGYRFYVRQAEKVIDGTPCDQNGTSICVAGQCKSIGCDDYLGSDKVIDKC
GICGGDNTACKVVSGVFKHTLTNLGYHKIVEIPEGATKINITEMSKSNNYLALRSRSGRS
IINGNWAIDRPGRYEGGGTMFTYKRPNEISSTAGESFLADGPTNEVLDVYMIHQQPNPGI
HYEYIIPGDNVISPQLLAHRRPGEPLNGQLEMPESTNHNEEDLHRETDTITGQSVGTFPV
IQPGRFPSHQPENQVPAVQLSRQNREYNWKQIGKTECTTTCGKGSQYPVFHCVNRVTHEE
VPENYCDSSTKPIPEEEACNIFPCPAFWDIGEWSECSKTCGLGMQHRQILCRQIYANRTL
TVQQYRCHHLEKPETTSTCQLKICSEWQIRTEWTSCSVPCGVGQRTRDVKCVSNLGDVVD
DEECNMKLRPNDIENCDMGPCAKSWFLTEWSDRCSAECGDGIRTRSVVCMTNHVSSLPLE
GCGNNRPSETTPCNNGPCAGKVEWFAGSWSQCSTECGGGTQQREIICVRKTEGNFDVLNP
YECSYLERPPSQQSCYLKPCGSKWFHTEWSTCSKSCEGGFRVREVRCLSDDMTTSTHCDP
QLKPEEKEPCNTQDCIPEIDENCKDKYYNCNVVVQARLCVYTYYKTACCASCTRVANRQS
GFLGHR
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atggtagacagtttaatagtttctttgagacttctcagttcactagcagtgctgggattt
cagtttgtcatcccacagccttcaattgaacacagaaaggttccccagaggatagaagag
caaagagatgcatctgaagatagcggtgcgggaatcccaggcatgtggggcagctggggc
ccctggtctgcctgttccaggagctgcagcggcggtgtgatggagcaaacgaggccgtgc
ctcccggcgtactaccgtgaaaggggctaccagaggccggggcggccatatgcggcctcg
gagagaactcttgctcaccagagctcccgccatcaggactcactgtctgcttacccaggc
cacgtcatttctgccatccgtacatctgtgccgcttcacaggaatgaagagcagctccgg
gccggcctgcgggcttctgctgcttctgaaggccataacaacagccacatgagccgagga
gctcccagaggcagccggcactctcagtcccagaggcatcaccccaaggcagaaaagaga
agcagaaatagaaatcctattggtccgggaaaatatggatatggaaaagtgccatacatt
ttacctttacaaactgatactggtcagcagcctcagaaacttcgaaggcagcgtcagtca
tcaaggaacaacgtatttcatcagagtccaagtctcataaatacttacagccagccagcc
agcccttcgctccaacatgggaacctttatcaagaagaaggtgggcctcaggctggtcac
caggtcctgggaccttcagtttatcagtcatcttcatttcctgtatctcagaacttgttt
catagcagtgactcaactcttcatgggtctgcatcacacctgatggtccagggtcagccc
cagcctcaaagggctgcagctattgtatgtgttggcacctacaagcaatataaactctgc
aacacaaacacgtgtcctgaaagcagtagaagtattagagaagtgcagtgtgcatcatac
aataacaagccatttatgggacgattttatgaatgggaaccttttgcagaagtgaaggga
agtcagaagtgtgagctgaattgccgtgctataggctaccgattctatgtgagacaagct
gaaaaggtgatagatgggacaccgtgcgaccaaaacggaacttcaatctgcgtggcaggg
cagtgcaagagcattggctgtgacgactatctgggttcagacaaggtgattgacaagtgt
ggaatatgcggaggggacaacactgcttgcaaggttgtttctggagttttcaaacacaca
ctaacaaatctcggctatcacaagatagtggaaattcctgaaggagctactaaaattaac
attactgagatgtcaaagagcaacaactatttggccttgcggagtcgatcagggcggtcc
atcatcaatggaaactgggcaattgatcgacctggaagatacgaaggtggtgggacaatg
ttcacttataagcgcccaaatgaaatatccagcactgcaggagagtcctttttagctgat
ggtccaacaaacgaagtcctcgatgtctatatgatacaccagcagcctaacccaggtata
cattatgagtatatcattccgggagacaatgtcatcagtcctcagttgcttgctcacagg
aggccaggggagcccttgaatggtcaattagaaatgcctgaaagtacaaatcacaatgag
gaggatttgcacagggagacagacactatcactggacagtcagttggaactttcccagtt
attcagccaggaagatttccttctcatcagccagaaaaccaggtgcctgctgtgcagcta
tcaagacaaaaccgagaatacaactggaaacagattggaaaaactgagtgtaccactacg
tgtgggaaagggtcccagtacccagttttccactgtgtcaacagagtcacacatgaggaa
gttcctgagaattactgtgacagcagcaccaaacctattccagaagaggaggcctgcaac
attttcccatgtccagctttttgggacataggggagtggtctgagtgcagcaaaacatgc
ggccttggcatgcagcatcgacagatcttatgtaggcaaatatatgccaaccgtaccttg
acagttcagcagtaccgctgccatcacctggagaaaccagagaccaccagcacttgccag
ctgaagatctgcagtgagtggcagattaggacagagtggacttcatgttcagtaccttgt
ggagtggggcagaggactcgagatgtgaaatgtgtcagcaaccttggagacgttgttgat
gatgaggagtgtaacatgaagctgcggccaaatgatattgagaactgtgacatgggacct
tgtgctaagagctggtttcttacagaatggagcgacaggtgttctgcagaatgtggtgat
gggatccgcacacgttcagtggtgtgtatgaccaatcatgtcagcagtttgcctctggaa
ggctgtggcaataacagaccctctgaaacaactccctgtaataatgggccctgtgctggt
aaagtggagtggtttgctgggagctggtcacagtgctctactgaatgtggtggtggaact
caacagagggaaatcatttgtgtcaggaaaactgaaggcaattttgatgttttgaacccc
tatgaatgctcatatttggaaagacctcccagccagcaatcctgctacctcaaaccctgt
ggatctaaatggtttcatacagaatggagcacatgttccaagtcctgtgaaggaggattt
agagttcgagaggtacgatgtctatcagatgacatgacaaccagtactcactgtgatccg
cagcttaaacctgaagaaaaagagccatgtaacacacaggactgtatccctgaaatagat
gagaactgcaaagataaatactacaattgcaatgtggtggttcaggcccggctttgtgtc
tacacctattacaaaacagcctgttgtgcatcctgtacacgtgtggcaaatagacagtct
gggtttctaggacacagataa
DBGET
integrated database retrieval system
