Lagopus muta (rock ptarmigan): 125698009
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Entry
125698009 CDS
T09141
Symbol
TRAPPC10
Name
(RefSeq) trafficking protein particle complex subunit 10 isoform X1
KO
K20307
trafficking protein particle complex subunit 10
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmut04131
]
125698009 (TRAPPC10)
Membrane trafficking [BR:
lmut04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
125698009 (TRAPPC10)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Ig_TRAPPC10
Foie-gras_1
NTS_TR130
SNAP
UFD1_N1
Motif
Other DBs
NCBI-GeneID:
125698009
NCBI-ProteinID:
XP_048811756
LinkDB
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Position
1:109428604..109469854
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AA seq
1267 aa
AA seq
DB search
MDPAAAAAGEEEGGEKPPVIYTMENKPIVTCAGDQNLFTSLYPTLSQQLPREPMEWRRSY
GRAPKMIHLESNFVQFKEELLPKEGNKALLTFPFLHIYWTECCDTEVYKTTVKDDITKWQ
NVLKAHNSVDWLIVVVESDAKKKNKTNILPRTSIVDKIRNDFCNKQSDRCVVLSDPLKDS
SRSQESWNAFLTKLRTLLLMSFTKNLGKFEDDMRTLREKRTEPGWSFCEYFMVQEELAFV
FEMLQQFEDALVQYDELDALFSQYVVNFGAGDGANWLTFFCQPVRSWNGLILRKPIDMEK
RELIQNQEATLLDLRSYLFSRQCTLLIFLQRPWEVSQRALELLHNCVQELKLLEVCVPPG
ALDCWVFLSCLEVLQRIEGCCDRAQIDANVSHTVGLWSYATEKLKSLGYLCGLVSENGPN
SEDLNRTVDLLAGLGAERPETANASQSPYKKLKEALSSVEAFEKHYLDLSHATIEMYTNI
GRIRSAKLVGKDLAEFYMRKKGPQKAEVYLQGALKTYLAEGWALLVTHTRKQLAECQKHL
GQIENYLQISSLLAGDNHLTEDERKSFCQEILDFANQQTENQGQKIILPMHSFAQLKTLH
FDPPNAVVHVGGKLSIELTLMSQMPIPIQVDQIAIHVHFSIEKNNYRKTAEWLTKHKISN
GVISFPNEVVGFPWSRNNLPALELYEMYERSPSDNSLNTAGIICKNVHMLLRRQESSSSL
DKPSGLTLEDGAHVLKCRNLILEPGVNKITFSTQAKEPGTYTLRQLCTSVGKIQFVLLHI
YPIVQYDVYSQEPQLKVEPTTDSLLAGIPQKVKFTVTTGHYSMKSGDTLQLSNADAMPIL
YNPESKAVIYSNTREKISESSLRIQSSEKITSINLPVAPAYHVIEFELEVMYLPSATESA
EEGENTTNKEVQRKNKEKQKLDNCMATVDQKVTIDCPWSIYSTIIALTFCIPFNAKHSLL
SAGKRKYVQVCIQNLSELCFQLSDNNLKNTADCTDLQLVPLNSESHQVIYSKQSIFFVWE
LKWTKELPLSLQCLFSVSFCPATSEKQSHTLKPFTYEFQVENFFTLYHVKTEIFPPLGTE
YCKTGSLCSLEVSITRLVDLSEVDRDEALTESDGYCTTKLMYEVVDNSSNWAVCGKSSGV
ISMPVAAQATHKVHMEVMPLFAGYLPFPDVRLFKYLPHHSAHSMQLDADSWIENDNLSVD
KNVDDQADSSSIRSRGSLHSAASGEHKGLPMPRLQSFSSGQVFNCSTGMQILVIPSKDDH
VLEVNIT
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atggaccccgccgcggcggcggccggcgaggaggagggcggggagaagccgccggtgatt
tacaccatggagaacaagcccatcgtcacctgtgctggagatcagaatttatttacttcc
ctgtatcctacgctttctcagcagcttccaagagaacccatggaatggaggaggtcttat
ggccgtgctccaaagatgattcatctagaatcaaactttgttcagtttaaagaggagcta
ttacccaaagaggggaataaggctcttctgacttttccctttcttcatatttactggaca
gaatgttgtgacacagaagtgtacaaaaccacagtcaaggatgacatcaccaagtggcag
aacgttctcaaggctcacaactcagtggactggctaattgtggtggttgagagtgatgcc
aagaaaaagaacaaaacaaatatccttccccgaacttctatagtagataaaataagaaat
gacttctgtaacaagcaaagtgacagatgtgtggtactttcagaccctttgaaagactct
tcccgttctcaggaatcttggaatgccttcctgaccaaactcaggacattgcttctcatg
tcttttaccaagaacttaggcaagtttgaagatgacatgagaactttgagagaaaaaagg
actgaaccaggatggagcttctgcgagtatttcatggtccaggaagaactggccttcgtc
tttgagatgctgcagcagtttgaagatgcactagtgcagtatgatgagctggatgccttg
ttttctcagtacgttgtgaactttggggctggtgatggtgcaaactggctgacatttttt
tgccagccagtgaggagctggaatggtttaattcttcgaaaaccaatagacatggagaag
agagagctaattcagaatcaagaagctactctactggacttgcgtagttacttattttct
cgccagtgcacgttgttgatcttcctgcagaggccgtgggaggtttcccagcgagcgttg
gagcttcttcacaactgtgtgcaagaactcaagctattagaagtctgtgttcctcccgga
gctttggattgttgggtatttttgagttgtttggaggtcttacaaagaatagaaggctgc
tgtgatagggctcaaatagatgcaaatgtttcccacacggttggtttatggagctatgct
actgagaagttaaagtctctgggttacctgtgtgggctggtgtcagagaacggacccaat
tcagaagaccttaacagaactgttgatctgttagcagggttgggagcagaacgtcctgaa
acagccaatgcatcacagagcccttacaagaaacttaaagaggccttatcatctgtagaa
gcttttgaaaagcactacttagatctgtcccatgccaccattgaaatgtacacaaatatt
gggagaattcgctcagctaagcttgtcggaaaggatttggcagagttttacatgaggaag
aaaggtccacagaaggcagaagtctatcttcaaggagcactgaaaacttaccttgctgag
ggctgggcattgcttgtcacgcatacaagaaagcagttagcagaatgtcagaaacacctt
gggcaaatagaaaattatcttcaaataagcagtcttttagctggtgataatcacctaaca
gaagatgagcgtaaaagcttttgccaagaaatactagattttgccaatcagcaaacagaa
aaccaaggtcaaaaaattatattgcctatgcactcctttgcacagttgaaaactctacat
tttgaccctccaaatgctgttgtccatgtaggtgggaagttgtctattgagttgactttg
atgagccaaatgcccattcctatccaagtggaccagattgctattcatgttcacttcagc
attgaaaagaataattacagaaaaacagcagagtggctcactaagcacaaaatctccaat
ggtgttatcagcttcccaaatgaggttgtaggatttccttggtcaagaaacaacttgcct
gcactggagctgtacgaaatgtatgaacggagtccctcagataactctttgaacacagca
ggaattatctgcaaaaatgtgcacatgctactacgaaggcaagagagcagcagttctctg
gataagccctcagggctaactctagaagatggggctcacgtgttaaaatgtcgcaacttg
atactggaaccaggggtcaataaaataacgttcagtactcaggccaaggaacctggtacg
tacaccctcaggcaactgtgcacttcagtgggaaaaatacagtttgtccttcttcatatt
tatccaatagtgcagtatgatgtctattctcaggagccccagctaaaagtggaaccgacg
actgatagccttttggctggcattccacagaaggtgaaattcacagtgactacaggtcat
tacagcatgaagagtggagatactttgcagctcagtaatgctgatgccatgcctattctg
tacaatccagagagcaaggcagtgatctattccaataccagagaaaagatctcagaatca
tcactaagaattcagtcttctgaaaagattacaagcatcaatttgccagtggctcctgca
tatcatgtgattgaatttgaactagaagtcatgtatttaccatcagccacagaatctgca
gaggagggagaaaatactacaaataaagaagttcagagaaaaaacaaagaaaaacaaaaa
ctggacaactgtatggctactgttgatcaaaaagtaaccattgattgtccttggtcgatt
tattccactattattgcattaacattctgcataccttttaatgccaagcattccttattg
tcagctggcaaacggaagtatgtgcaagtctgcatacagaatttgtcagaactctgcttt
cagctttcagacaataacctaaaaaatactgctgactgtacagatttgcagctggtacct
ctgaactctgaatctcatcaggtcatatatagtaagcaatcaatattctttgtgtgggaa
ttgaagtggacaaaagagcttcctctctccttgcagtgcctgttttcagtcagcttttgt
ccagctacctctgaaaaacagtctcataccttgaagccgttcacttatgagttccaagtg
gaaaatttttttacattgtaccatgtgaaaactgaaatttttccaccactggggacagag
tactgtaaaacaggctcactatgctccttagaggtgtccatcactcgtcttgttgacctc
tcagaggttgacagggatgaagcattaacagaatcagatgggtattgcacaacaaaactt
atgtatgaagttgttgacaacagcagtaactgggcagtctgcggaaaaagttctggagtg
atatctatgcctgtagcagctcaagcaactcacaaagtccacatggaagtgatgccactg
tttgctggatatctaccttttcctgatgtcagattatttaaatacctccctcatcattct
gctcactccatgcaacttgatgctgatagctggattgaaaatgataacctgtctgtggac
aagaatgtggatgatcaagctgacagcagcagcataaggagcagaggtagcttgcattct
gcagctagtggggaacacaaaggtttgccaatgccccgtctgcaatccttttcatctggt
caggtcttcaactgcagcacgggtatgcaaatacttgtcattcccagcaaggacgaccat
gttctcgaagtcaatatcacgtga
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