Lagopus muta (rock ptarmigan): 125698061
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Entry
125698061 CDS
T09141
Name
(RefSeq) cartilage intermediate layer protein 1 isoform X1
KO
K24436
cartilage intermediate layer protein
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lmut04990
]
125698061
Domain-containing proteins not elsewhere classified [BR:
lmut04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
125698061
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Ig_3
CarboxypepD_reg
Ig_2
CarbopepD_reg_2
I-set
TSP_1
TSP1_spondin
ig
TSP1_CFP_C
Motif
Other DBs
NCBI-GeneID:
125698061
NCBI-ProteinID:
XP_048811880
LinkDB
All DBs
Position
10:2574363..2589160
Genome browser
AA seq
1105 aa
AA seq
DB search
MMLVTARGWMLLLLLLLGATASSGQRLVRQGLGRIQIGQKTFRPIVMLSLEGTRSSPRRL
DPIFTSARRTVLVQDPRKFLSPWSKWSECSGTCGQTGVQKRTRSCLADRLWGVHCNEVME
EGRLCIGHVCSGCNITCPMGRVNADCDACMCEDVTLHGKVSLEDGSPADNARVYLQANNL
KLLTTADNKGTFRIPGVCPDGSNTLKIKKAKYTTAAITVPETNRKNLALQVQLKRSGKPY
VFKSPDDKARRVGQSVSLCCNAVGTPAPDRYLWYHNGSLLDPSIYRYKNNLILKNLNRGQ
AGEYFCKAISDGGSAKSQPATLSVIGKQEAACSSQPQSHLIRLPHDCFQKATDSFYYDVG
KCPARTCVGKLDKGLRCKDNISYCCGVSKMEVREILCDGYTLPTKVAVECGCKKCTETKI
TVRGRATAVDNGEPLRFGHIYMGNKRVSMTGYKGTFSIHVPPDTERLVLTFVDRLQKFVN
TTKVLPFKENGGAVFHDIKLLRKKAPVTLESTETSVIPLGEKEDEDPIAELEIPPDSFYR
KNGEPYRGKVKASVTFLDPRELSTAPVTQSDLNFVDDEGDVFPLRTYGMFSLDFTDEQGT
ETLNAEDVKVHLDTAQVRMPEHIQEMKLWSLNPETGLWEEEGDFNLEKSRRRRREERTFL
VGNMEIKERRLFNLDVPESRRCYVKVRAYRSERFLPSEQIQGVVISVINTEPEPGFSSNP
RAWGRFDSVVTGPNGACVPAFCDEQNPEAYAAYILASLGGEELEAVPSAPKLNPNAIGVP
QPYLNKLNYRRTDHEDPNTKKTAFRINMAKPSPNSADENNGPIYAYENLKECEEAPYSAA
HFRFYRIEGDRYDYNTVPFSEDDLMSWTDDYLAWWPKPMEFRACYIKVKINGPQEVNIRS
RNMGGTHPRTIGRLYGIRDVRSIRDPEQQDVSAACLEFKCSGMLFDQDRVDRTLVKVIPQ
GSCRRESVNSMLHEYLVNHLPMATNNDSSEYTMLAPLDPLGHNYGIYTVTDQDPRIAKEI
ALGRCFDGTSDGTSRIMKSDIGVALTFTCSERSAAEQSLFESQRNLGQQSVQVPPRESPA
YQRPVGSRQITQSRIQMRGQRPSSY
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgatgctggtcaccgcaagaggatggatgctgctgctactgctgctgttgggagccaca
gccagttcaggtcaaaggcttgttagacaaggccttggcaggatccagataggacagaaa
accttcagaccgatagtgatgctcagcctagagggtacgaggagcagcccccgtcggttg
gacccgatcttcaccagcgccagacgcactgttctggtgcaagatcccagaaagttcttg
tctccatggtcaaaatggagtgagtgctcaggaacgtgtggccaaactggtgtgcagaag
cggacccgatcctgcctggcggatcgcctctggggcgtgcactgcaatgaagtcatggag
gaagggcggctctgcatcggacacgtctgctcaggctgcaacatcacctgccccatgggc
cgcgtgaacgccgactgcgatgcatgcatgtgcgaggacgtgaccctgcatggaaaggtc
tccttggaggatggttcacccgcagacaacgcccgggtctacctgcaagccaacaatctc
aagctgttgacgacagctgacaataagggcacgtttaggattcctggggtctgtcccgat
ggcagcaacaccctcaaaataaagaaagccaaatacacgaccgcagccatcactgtaccg
gagaccaacaggaagaacctggcgctccaagtgcagctgaagagatcaggcaaaccctat
gttttcaagagccctgatgacaaggcgaggagagtggggcagagcgtgtcactctgctgc
aatgctgtggggactccggccccagatcgctatctgtggtaccacaatggctccctgctg
gatccttctatatatagatataaaaacaacctcattctgaagaacctgaacagagggcag
gcaggagaatatttctgcaaggccatcagtgatggaggttcagcaaaatcccaacctgcc
acgctttctgtaataggaaaacaagaggcagcctgcagctcccagcctcaaagccacctc
attcgtcttccgcacgactgtttccaaaaagcaactgactcgttctactacgacgtgggc
aagtgcccagcaaggacctgcgttgggaagctggataagggactccgctgtaaggacaac
atctcctactgctgtggggtgtctaagatggaagtgagagagatcctgtgcgatgggtac
acgctccccaccaaagtcgccgtagaatgcggttgcaaaaaatgcaccgagacaaaaata
acagttcggggcagagctacagcggtggataacggtgagccactgaggtttggccacatc
tacatggggaacaagagagtgagtatgactggctacaagggaaccttctccatccacgtc
ccaccggatactgaaagactggttctaaccttcgttgatcggctgcagaagtttgtgaac
acaacaaaagttttgccgttcaaggaaaatggaggtgctgtgtttcatgacattaagtta
ctacgaaagaaagcccctgttacactggaatccactgaaaccagtgtaattcccttggga
gaaaaggaagatgaggatcctattgctgaattagaaatccctcctgattcattttacagg
aagaatggagaaccttacagaggaaaagtgaaagccagcgtgacgtttctggacccaaga
gaactctcaacagcgcctgtgacacaaagcgacctgaactttgtagatgacgaaggagat
gtgttcccgctccgcacgtatggcatgttttccctggacttcactgatgaacagggcacc
gagactcttaatgcagaagatgtgaaggtccacttggacactgctcaggtgaggatgcca
gagcacatacaagaaatgaagctttggtcactgaaccctgagacaggcttatgggaggaa
gagggggacttcaacctggagaaaagcagacggcgcagaagagaggagaggacttttttg
gttgggaacatggagatcaaggaaaggcggctttttaacctggacgtcccagagagcaga
cggtgctacgtcaaagtccgagcatacagaagtgagagatttttgccaagcgagcagatc
caaggggtggtgatttctgttataaacacggagccagaaccagggttctcctccaaccct
agagcatggggccgttttgacagcgtggtcactggtcccaatggtgcttgtgtgccagct
ttctgtgacgagcagaacccggaggcctatgcagcttacattttggcgagcttggggggt
gaagaacttgaagcagtgccctctgctcccaaactcaatcctaatgccattggcgtccca
cagccatatctcaacaagctcaactacaggagaacagaccacgaggatcctaacacaaag
aaaaccgcattcagaatcaatatggccaagccaagtccaaattctgcagatgagaacaat
ggccctatttatgcctatgaaaatctgaaagaatgtgaggaagctccatacagcgctgct
cacttcaggttttacaggatagagggagatcggtacgactacaatactgttcccttcagt
gaagatgacctcatgagctggaccgatgactatctggcatggtggcccaaacccatggaa
tttagggcttgctacataaaagtcaaaattaatggaccccaagaagtgaacataaggtct
cgcaacatgggtgggacgcatccacgcaccattggcaggctctatggcatcagggacgtc
cgcagcattcgggatcctgagcagcaggacgtgtcagcagcctgcctggagttcaagtgc
agtggcatgctcttcgaccaagaccgtgtggatcgcacgcttgtgaaagtcatcccacaa
ggcagctgtcgccgggagagcgttaacagcatgctccacgagtacctggtgaaccacctc
cccatggctaccaacaacgattccagtgaatacacaatgctggcaccccttgaccccctg
gggcataactatggcatctacaccgtcactgaccaggacccgaggatcgccaaggaaatt
gctttgggcaggtgtttcgatggcacatcagatggcacctccagaatcatgaagagtgat
atcggtgttgcgctgactttcacctgttcggagaggagcgcagcagagcaaagcttattt
gagtcccagaggaacttaggccagcagtccgtgcaggtaccaccaagggagagccctgca
taccaaaggccggtgggaagccgccagatcacccaaagcagaatccagatgagaggtcaa
cgtccttcttcatactag
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