KEGG   Lagopus muta (rock ptarmigan): 125698092
Entry
125698092         CDS       T09141                                 
Symbol
U2AF1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit isoform X1
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
lmut  Lagopus muta (rock ptarmigan)
Pathway
lmut03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lmut00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125698092 (U2AF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lmut03041]
    125698092 (U2AF1)
Spliceosome [BR:lmut03041]
 Complex A
  U2 snRNP components
   U2 related factors
    125698092 (U2AF1)
 Complex B
    125698092 (U2AF1)
SSDB
Motif
Pfam: zf-CCCH RRM_1 Torus zf_CCCH_4 zf-CCCH_2
Other DBs
NCBI-GeneID: 125698092
NCBI-ProteinID: XP_048811947
LinkDB
Position
1:complement(108892844..108908678)
AA seq 237 aa
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ
SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE
EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKKHRSRSRSRERRSRSRDRGRGGGGGGGGGRERDRRRSRDRERSGRF
NT seq 714 nt   +upstreamnt  +downstreamnt
atggcggagtatctggcctccatcttcggaacagagaaggacaaagtcaactgttcgttt
tatttcaaaatcggagcttgccgtcatggagacagatgttctcggttgcacaacaaacca
acatttagccagaccattgccctcttgaacatttaccgtaaccctcaaaactcttcccag
tctgctgacggtttgcgctgtgctgtgagcgatgttgagatgcaggagcattatgatgaa
ttctttgaggaggtcttcacagaaatggaagaaaaatacggtgaagttgaggagatgaat
gtttgtgataaccttggagatcatctagttggaaatgtatacgtaaagtttcgccgtgaa
gaagatgcggaaaaggctgtgattgacctgaacaatcgctggtttaatgggcagcctatt
catgctgagctttcacctgtgaccgatttcagagaggcctgttgccgtcaatacgaaatg
ggagagtgtacacgaggaggtttctgcaacttcatgcatttgaagcccatttctcgagag
ttaagacgtgagttgtacgggcgtcgtcgtaaaaagcatagatccaggtcgaggtcccgt
gaacgtcggtctagatccagagatcgtggtcgtggaggtggtggtggaggaggaggagga
cgtgaacgtgataggaggcgatcaagagatcgtgaaagatccggtcgattctga

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