Lagopus muta (rock ptarmigan): 125698092
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Entry
125698092 CDS
T09141
Symbol
U2AF1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit isoform X1
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125698092 (U2AF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lmut03041
]
125698092 (U2AF1)
Spliceosome [BR:
lmut03041
]
Complex A
U2 snRNP components
U2 related factors
125698092 (U2AF1)
Complex B
125698092 (U2AF1)
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Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
125698092
NCBI-ProteinID:
XP_048811947
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Position
1:complement(108892844..108908678)
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AA seq
237 aa
AA seq
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MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ
SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE
EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKKHRSRSRSRERRSRSRDRGRGGGGGGGGGRERDRRRSRDRERSGRF
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtatctggcctccatcttcggaacagagaaggacaaagtcaactgttcgttt
tatttcaaaatcggagcttgccgtcatggagacagatgttctcggttgcacaacaaacca
acatttagccagaccattgccctcttgaacatttaccgtaaccctcaaaactcttcccag
tctgctgacggtttgcgctgtgctgtgagcgatgttgagatgcaggagcattatgatgaa
ttctttgaggaggtcttcacagaaatggaagaaaaatacggtgaagttgaggagatgaat
gtttgtgataaccttggagatcatctagttggaaatgtatacgtaaagtttcgccgtgaa
gaagatgcggaaaaggctgtgattgacctgaacaatcgctggtttaatgggcagcctatt
catgctgagctttcacctgtgaccgatttcagagaggcctgttgccgtcaatacgaaatg
ggagagtgtacacgaggaggtttctgcaacttcatgcatttgaagcccatttctcgagag
ttaagacgtgagttgtacgggcgtcgtcgtaaaaagcatagatccaggtcgaggtcccgt
gaacgtcggtctagatccagagatcgtggtcgtggaggtggtggtggaggaggaggagga
cgtgaacgtgataggaggcgatcaagagatcgtgaaagatccggtcgattctga
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