Lagopus muta (rock ptarmigan): 125698216
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Entry
125698216 CDS
T09141
Symbol
FANCI
Name
(RefSeq) Fanconi anemia group I protein isoform X1
KO
K10895
fanconi anemia group I protein
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
125698216 (FANCI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmut03400
]
125698216 (FANCI)
DNA repair and recombination proteins [BR:
lmut03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
125698216 (FANCI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCI_S4
FANCI_HD2
FANCI_S3
FANCI_S1
FANCI_S2
FANCI_HD1
FANCI_S1-cap
DUF6442
Motif
Other DBs
NCBI-GeneID:
125698216
NCBI-ProteinID:
XP_048812194
LinkDB
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Position
10:7412466..7435286
Genome browser
AA seq
1339 aa
AA seq
DB search
MAQRILQLAAEESPERLQEALQGLAEGELGDMVTRQALRGRETAALLRGIFRGSPCSQPS
GVLRRLQVYKHCVPLVESGDLHVGKVSEIIGLLMLEARQLPGHALAELATSFVEVIKGGS
LSNGKSLELFSTVLTALSNSKESLAYGKGELNGEEFKKQLINTLCSSKWDPQCVIHLANM
FRDIPLSGEELQFVVEKVLRMFSKLDLQEIPPLVYQLLLLSAKGSKKTVLEGIISFFNQL
DKKQKEEQRVPQSADLEVATLPLDQLRHVEGTVILHIVSAINLDQDIGEELIKHLKTEQQ
KDPGKALCPFSVALLLSIAVKHRLQEQIFDFLKTSITRSCKDLQFLQASKFLQDLCPQQY
DVTAVILEVVKNSAFGWDHVTQGLVELGFSLMESYEPKKSFGGKTAETNLGLSKMPAQQA
CKLGASILLETFKVHEPIRSDILEQVLNRVLTKAASPVSHFIDLLSNIVVSAPLVLQNSS
SRVTETFDNLSFLPIDTVQGLLRAVQPLLKVSMSVRDSLILVLQKAIFSRQLDARKAAVA
GFLLLLRNFKILGSLTSSQCSQAIGATQVQADVHACYNSAANEAFCLEILGSLRRCLSQQ
ADVRLMLYEGFYDVLRRNSQLASSIMETLLSQIKQYYLPQPDLLPPLKLEGCIMAQGDQI
FLQEPLAHLLCCIQHCLAWYKSTVHLCKGAEDDEEEEEEVGFEQNFEEMLESVTRRMIKS
ELEDFELDKSADFSPSSGVGVKNNIYAIQVMGICEVLIEYNFNTGNFSKNKFEDVLGLFT
CYNKLSEILKEKAGKNKSTLGNKIARSFLSMAFVSTLLTALFRDNAQSHEESLAVLRSST
EFLRYAVSVALQKVQQLEETGQTDGPDGQNPDKMFQNLCKITRVLLWRYTSIPTAVEESG
KKKGKSISLLCLEGLLRIFNTMQQLYTARIPQFLQALDITDGDAEEADINVTEKAAFQIR
QFQRSLVNQLSSSEDDFNSKETQLLITILSTLSKLLDPGSQQFLQFLTWTVKICKENALE
DLSCCKGLLTLLFSLHILYKSPVSLLRELAQDIHACLGDIDQDVEIESCSHFAIVNVKTA
APTVCLLVLGQADKVLEEVDWLIKRLTILGSDTSEDSTQASNQTQALEKGVILQLGTLLT
VFHELVQTALPAGSCVDSLLRSLSKTYTILTSLIKHYIQACRSTSNAVPGRLEKLVKLSG
SHLTPQCYSFITYVQNIHSESLSFAEEKNKKKKEDETAAVSTVMAKVLRETKPIPNLIFA
IEQYEKFLIHLSKKSKVNLMQYMKLSTSRDFRINASMLDSVLQEHNTEDAENEPDNNQSS
TAEQPDENQEPQKKRRRKK
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcgcatcctgcagctggcggccgaggagagcccggagcggctccaggaggct
cttcagggcctggcggaaggcgagctgggtgacatggtgacgaggcaagccctgaggggc
agggagacggcagcgctgctcagggggatcttcagaggctccccatgttcccagccaagc
ggtgttctcaggaggctgcaggtttacaagcactgtgtcccacttgtggaatcaggagat
ctgcatgtgggcaaagtgtccgaaatcatagggctgctgatgctggaggctcgccagctg
ccaggccacgcgttggctgaacttgccacctcgtttgttgaagttattaagggaggcagc
ctgtctaatgggaaatctctggagttgttttccactgttcttaccgcgttgtccaactct
aaggagagcctggcttatgggaaaggtgaactgaatggggaagaatttaagaaacagctg
ataaataccctctgctccagcaagtgggatcctcagtgtgtaatacatcttgccaacatg
ttcagggatattccactctcaggagaggagctgcagtttgtggtggaaaaggtccttagg
atgttctccaaattagacctgcaggaaataccccccctggtctatcagctgctgctgctt
tctgcaaagggcagtaagaaaactgttttagaaggaatcatcagttttttcaatcagctg
gacaagaaacaaaaggaagaacagagggttccacaatcagcagaccttgaggtagccacg
ctgcccctcgaccagctccgccacgtggaaggtaccgttatcctccacatcgtttctgct
atcaacctggaccaggacattggcgaggaactaatcaaacatctgaagacagagcaacag
aaggaccctggtaaagccctgtgtcccttcagcgtggcccttttgctttcgattgcagtg
aaacacagactgcaagagcagatatttgatttcttgaaaacatcaatcacaagaagctgc
aaggacctgcagttcctacaggcctccaagtttctgcaggatttgtgtcctcagcaatat
gatgtaacagctgtaattctggaggtggtgaaaaatagtgcatttggctgggaccatgtt
actcagggactggtagagctcggcttcagcctaatggaatcatatgaaccaaaaaaatcc
tttggagggaaaactgctgagaccaacttgggcctttcaaaaatgccagcacagcaggct
tgcaaactgggagcgagtatcctgctggaaacatttaaggtccatgagcccatcagaagt
gatattcttgagcaagtcctgaacagagtcctcacaaaagcagcatctcctgtcagccac
ttcatagacttgctgtccaatattgttgtgtctgctcctcttgtgcttcagaactcatcc
tccagagtcacagagacctttgacaatttgtcctttctgcccattgacacagtgcaaggg
ctcctccgggcagtacagcccctgctcaaagtcagcatgtcggtgagggactccctgata
cttgttctccagaaagctatcttttccaggcagctcgatgctcgtaaagctgcagttgct
ggttttttgcttctgttaagaaattttaagattctgggcagcttgacttcttcccagtgc
agccaggcgattggtgccactcaggtccaggcagatgttcatgcctgctataattctgca
gctaatgaggccttctgccttgaaatcctgggcagcctgaggcgatgtctgagccagcaa
gcagatgtccgactcatgttgtatgagggtttttatgatgtcctacgcaggaactcccag
ctggccagctctataatggaaactcttctgtcccagataaagcaatactacttgccccag
ccagacctcctgcctccactgaaacttgagggatgtataatggctcaaggagaccaaatc
tttttgcaagaacctctggcccatctgctctgctgcatccagcactgtttagcctggtat
aagagcactgtgcatctatgcaaaggagctgaagacgatgaggaggaggaggaggaggtg
ggatttgagcaaaactttgaagagatgctagaatctgtcacacgacggatgatcaagagt
gagctggaagactttgaactggataaatcagcagatttttctccatcttctggtgttggt
gtaaagaataacatctatgccatccaggtgatgggaatttgtgaggtcttgattgagtac
aatttcaacacagggaatttcagtaagaacaaatttgaagatgtcctaggcctgttcaca
tgttacaacaaactctcagaaatcttgaaggagaaagctggaaagaacaaatctaccttg
ggcaacaaaattgcacggagtttcctctctatggcttttgtgtctacgctgctcacagct
ctgttcagggacaatgcccaaagccacgaggagagcctggcagttctgcgctccagcacg
gagttcttgcgctatgctgtcagtgtggcactacagaaggtgcagcagctggaggagacg
ggacagaccgacggcccggatggacaaaaccctgacaagatgtttcagaacctgtgcaaa
atcacacgggttctgctttggaggtacacttcaattcccactgctgttgaagagtcaggg
aagaagaagggcaaaagcatttccctgctgtgcttggaaggcttgctgcggatcttcaac
accatgcagcagctgtacactgctaggatcccccagtttctacaggccctggatattact
gatggtgacgcagaagaagcggatattaatgtcacagagaaagctgccttccagatccga
cagtttcagaggtctctggtgaaccagctcagtagctctgaagatgacttcaactccaag
gaaacacagttactcatcacaattctctccactttgtccaaactcctggacccaggctct
cagcagttccttcagttccttacttggacagtcaaaatttgcaaagaaaatgctctagag
gatctctcttgctgtaagggtttgctgactttgctttttagtctccacattctgtacaag
agtcctgtcagtctgctgcgtgaacttgcacaagatatccatgcttgcctgggagacata
gatcaggatgtagaaatagagagttgctcccattttgccatagtcaacgtgaagactgca
gcccctactgtctgtctgctggttctggggcaggcagataaggtccttgaagaggtggac
tggcttatcaagaggcttaccattctgggatcagacacatcagaagactcgactcaggca
tcaaaccaaacccaagctctggagaaaggtgtgattctgcagctgggaactctgctgaca
gtttttcatgagctggtgcagacagcacttcctgcagggagctgtgtagactcactgctg
agaagcctcagcaagacatacacaatcctcacctccctcatcaagcattacatccaagcc
tgccgcagcacctcaaatgcagttccggggaggctggaaaagctggtgaagctctcaggt
tcccacttgaccccacagtgttactcattcattacttacgtacagaacatccatagtgag
agcttaagctttgcagaagagaagaataagaagaagaaagaagatgaaactgctgcagtc
tccacagtcatggctaaagtgcttcgggagaccaagccaatcccaaacctgatttttgct
atagagcaatatgagaagttccttatccatctttccaagaaatcaaaggtgaacttgatg
caatacatgaagctcagcacctcccgggacttccgcatcaacgcgtccatgctggacagc
gtgctgcaagagcacaacacagaggatgctgaaaatgagccagacaacaaccagtccagc
acagcagagcagccagatgaaaaccaggaaccccaaaagaaaagaaggcgaaaaaaataa
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integrated database retrieval system
