Lagopus muta (rock ptarmigan): 125698269
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Entry
125698269 CDS
T09141
Symbol
FAN1
Name
(RefSeq) fanconi-associated nuclease 1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
125698269 (FAN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmut03400
]
125698269 (FAN1)
Enzymes [BR:
lmut01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
125698269 (FAN1)
DNA repair and recombination proteins [BR:
lmut03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
125698269 (FAN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAN1_TPR
Fan1_SAP
VRR_NUC
FAN1_HTH
zf-WRNIP1_ubi
PRP21_like_P
TPR_12
EPO_TPO
Utp12
Motif
Other DBs
NCBI-GeneID:
125698269
NCBI-ProteinID:
XP_048812367
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All DBs
Position
10:14605242..14624458
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AA seq
1040 aa
AA seq
DB search
MSESRSSGRRKAQIALSPSAKKKKKEAARKAKDKGTPSIPPQSCSIISLFNNAPPAKVSC
PVCGQLVPRYGINQHMDWLCRSSCAGLGAAAAGGDGGAALGTTQSLPGTPVSFNSSPYCS
EPSHLRTSPSQSRVLKTEGRAVQHVSPYFSSRGPAGDVYTEPLEQTVKVVSLGSLSSKLS
RRRRIQRGKQIMYKEMDSSPPAAHSMCGSAAALDGSADDICAGSSSQKENELVQRVHQEQ
NPLEEFEFQTEIDEYNKGDVTDVVQVSLPADGVLFGARNSRAGSRSKGVVLSPSNSQTPL
AVGTSAGLVSSSEVEAQPRAQHVPSSEMEVDCGTQSCFNDGDEQVLPVEVLEDFNYEFNH
NLAETVEKVDSQNSVGDILNKINEVSSPSHPYYLRNFLMVLRAVLENEDDLRLFDEQDMN
VITQFCQLSVGGQKLYVRLFQRKLNWLKVNKIEYEEIAKDLSPIIEELVEARFLQTESEL
EDLCEGLDLLSAPELKSLAKIFHLPNPNGQKQQLVDDFLRLAKQRSIFSRNQAGIGTVIL
KRAKDLVGRSVRICKGPRAVFSRILLLFSLSESVEDEEAGSAGQGQLFTVLMVNMGRMVF
PSYAVNRKTQVFQDREDLIRYANAAHLSNDIATAMVNGNWEEAHRLYACAKETWNSLKDH
PSLSNHRVLPEYLRHFTVGWKYTRILSQGVEILQRLHMYEAAVQELQELLAQDVYCTDSR
GRWWDRLALNLHQHLKNTPQAVDCIRNGLADPFVRTGHRLALYLRALRIRDSPSCRQLRC
LFHDLPGITVEDVTHVTIKGKMCPQTGVGKSVFLMEDISDEEEGGKDCSVSTVMCSVEEL
ALTHYRQNGFDQGIHGEGSTFITLYGILMWDIIFMDGIPDVFRNSYQMFPLDLYTDCFYE
NRRDAIEARLQQLHGASVETLANLIADIWTTQEGKAAALVSWGLFSSLQQVQSLVSCLGG
TFLSGVFRRLSKDLRHCRGGLPDLVVWSTHSNHFKLVEVKGPNDRLSHKQMIWLSELKKL
GAAVEVCHVQAVGAKSKRLS
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaatccaggtcttcaggaaggagaaaagcccagatcgctttgtcaccgagtgca
aagaagaaaaagaaagaagcggcgaggaaagcgaaagataaaggaacgccctctatacct
ccgcagtcctgctctattatttcgttattcaacaatgcgcctcctgctaaagttagctgt
cccgtgtgtgggcagctggtgccgaggtacgggataaaccagcacatggactggctgtgt
cgaagcagctgtgccgggctgggtgctgctgctgctggtggtgatgggggtgcggcgctc
ggcaccacacagagtctgccaggcacacctgtgagctttaattccagcccgtattgctcg
gagccctcgcatctgaggacaagtccttcccaaagcagagtgctgaaaacagaaggcagg
gcagtgcagcacgttagtccttattttagcagtcggggtccagccggtgatgtttacact
gagcccctggagcaaacggttaaagtcgtttctttgggaagcttgtcatctaaactgtcc
agaagacgtcgcatccagaggggaaaacagatcatgtataaggagatggactcctcgcct
ccagctgctcacagcatgtgtggcagtgctgcagcactggatggcagtgctgatgacatc
tgtgctgggagtagttctcagaaagaaaacgagcttgttcagagagtgcaccaggagcaa
aatcccttggaagagtttgaatttcaaactgaaatagacgaatataataagggagatgtt
acagatgttgttcaggtatcgttaccggctgatggagtgctgtttggtgcaaggaactcc
agagcgggaagtagatctaaaggcgtggtgctcagtcccagtaattctcaaacacctctg
gctgttggtacctcagcagggctggtcagcagttcagaggttgaggcacagcctcgtgct
cagcatgttccgtcttcagagatggaagtggactgtggtacgcaaagctgctttaatgac
ggtgatgaacaggtacttcctgtggaagttcttgaagactttaattatgagtttaatcat
aacttagcagaaactgtggaaaaggtggattctcaaaattctgttggtgatattttaaat
aaaataaatgaggttagctctcctagtcacccatattacctccgaaactttttaatggtg
ttgcgagcagtgttggagaatgaagatgatctgagactctttgatgagcaagatatgaac
gttattactcagttctgccaattatcagttggtgggcagaagttatatgtgagacttttt
caacgtaagctgaactggttaaaagtgaacaaaattgagtatgaagagatagctaaggat
ttgtcaccaataattgaagaactggttgaagccagatttttgcaaacagaatctgagctg
gaagacctgtgtgaaggtttggatttgctttctgcccctgaactaaaatctttagcaaag
atctttcacttgccaaatccaaatggtcagaaacaacaacttgtggatgatttcctgagg
ttggcaaagcaacgttccatcttcagcaggaatcaggctggtattgggactgttatttta
aaaagggcaaaggatctggtgggaagatcagtcagaatatgtaaaggccctcgagctgtc
ttttctcgaatcctgctgctattttccctgtctgaatcagtggaggatgaagaagctggc
agtgctggtcaagggcagctcttcacagttcttatggtaaacatgggacgtatggtgttc
cccagttatgctgtgaataggaaaacacaagtcttccaggacagagaggatcttatcagg
tatgcaaatgctgctcacctgtcaaacgatatagccactgcaatggtaaatgggaactgg
gaagaagctcatcgtctgtatgcgtgtgcaaaagaaacctggaacagtctgaaagatcac
ccctctttgagcaatcacagagttctacccgagtatctgcgacatttcacagttggctgg
aaatacacaaggatactttctcaaggtgttgaaattttgcagagacttcacatgtatgag
gcagcagtgcaggagctgcaggagcttttggctcaggacgtgtattgtaccgacagcagg
gggcgctggtgggatcgcctcgctctgaatttacatcagcacttgaaaaacaccccgcag
gctgttgactgcattaggaatggactggctgacccgtttgtacggacggggcaccgtctc
gctctctacctgcgggctctacgcatcagagactcaccaagctgcaggcagctcagatgc
ctttttcatgatttgccaggcataactgtggaggatgtgacacacgttacaatcaaggga
aagatgtgtcctcaaacaggagtgggaaaatctgtgtttctaatggaggatatcagtgat
gaagaagaaggaggcaaagactgcagtgtatccacagtcatgtgctcagttgaggagctt
gcattaactcattacagacagaatggttttgatcagggtattcatggagagggttcaacg
tttattacactgtatggtattctaatgtgggatatcattttcatggatggcatacctgat
gtcttcagaaattcctatcagatgttccccctggatttgtacactgactgcttctatgag
aacaggagggatgccattgaggccaggctccagcagcttcacggagcttctgtggagact
ctggcaaacttgattgctgacatctggaccacgcaggagggaaaagcagcagcactggtt
agctggggactttttagttccctccagcaggttcagagccttgtctcttgccttggagga
acgtttctgagtggtgtttttaggcgactttccaaagatctgcgccactgcagagggggg
cttcctgatctggtggtgtggagtactcacagtaatcacttcaagctcgtagaagtgaaa
ggccccaacgatcgcctgtcccacaagcagatgatctggctgagcgagctgaagaagctg
ggggctgctgtagaagtctgtcacgtacaagcagttggagctaaaagtaaacggctcagt
tga
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