Lagopus muta (rock ptarmigan): 125698288
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Entry
125698288 CDS
T09141
Symbol
NEIL1
Name
(RefSeq) endonuclease 8-like 1
KO
K10567
endonuclease VIII-like 1 [EC:3.2.2.-
4.2.99.18
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
125698288 (NEIL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmut03400
]
125698288 (NEIL1)
Enzymes [BR:
lmut01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
125698288 (NEIL1)
DNA repair and recombination proteins [BR:
lmut03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
125698288 (NEIL1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neil1-DNA_bind
Fapy_DNA_glyco
H2TH
Motif
Other DBs
NCBI-GeneID:
125698288
NCBI-ProteinID:
XP_048812407
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All DBs
Position
10:complement(17762007..17766217)
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AA seq
384 aa
AA seq
DB search
MPECPELHLAGRYINEACGGLVFEGGVQRSAVGRGPEVPFSSEAYRVTAVSRGKELRLTL
EPLGPGPSQALVFRFGMSGSFRLCEASSPPRHAHLRFFTRESPPRSLCFVDPRRFGTWRL
GEEWQPDRGPCVLLEYAAFRENVLTNLEDKAFDKPICEALLNQKYFNGIGNYLRAEILYR
AKIPPFEKARTVLEALKHQEQNSSLTLSKKLKLKRDNPDLLELCHTVPMEVVAADKNLFD
PSSDSDNYAAFKNWLQCYLVPGMSSLRDRNNRTIWFQGEPGPMAPKGQKSRKKHAHLKAD
PEAPTPTVTTRASKRRSGGAEKPPEPAVKEEEEKAVPDGSRKGRARGRKKVAAAPTLPEP
DVPPVRAKRNRTSARRGRGAAAVV
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgccggaatgcccggagctgcacctggccggccgctacatcaacgaggcgtgcggcggg
ttggtgttcgagggcggcgtgcagcgctcggctgtgggccgcggcccggaggtgccgttc
agcagcgaggcctacagggtgacggccgtctcccgcggcaaggagctgcggctgacgctg
gagccgctgggccccggcccttcgcaggccttggtgttccgcttcggcatgtcgggttcg
ttccggctgtgcgaggcctccagcccgccccgccacgcgcatctgcgttttttcacccgt
gagagccccccccgctccctctgcttcgtggatccccggcgcttcggcacctggcggctg
ggagaggagtggcagcccgaccgcgggccctgcgtcctgctggagtacgcggccttcagg
gagaacgtgctgaccaacctggaggataaagctttcgacaagcccatctgcgaggcgctg
ttaaaccagaagtatttcaatgggatcggcaattacctccgtgctgagatcctgtacagg
gcgaagatccctccttttgaaaaggcccggactgtgctggaagccctgaagcatcaggag
cagaattcttccctgacattgagtaagaagctgaagctgaagagagataacccggatctc
ctggagctgtgccacacggtgcccatggaggttgtggcagcagataaaaatctctttgac
ccttcttctgactcggataactatgctgccttcaagaactggctgcagtgttacttagtg
cctggcatgagctccctgcgggaccgcaacaacaggaccatatggttccagggagagcct
ggccccatggctcccaaaggtcagaagtcccgcaagaagcacgcacacctgaaggcagat
cctgaagctccaacccccacggtcacaacacgtgcctccaaacggcgttctgggggtgca
gagaagcccccggagccagctgtgaaggaggaggaagagaaggcagtgcctgatgggtca
aggaagggacgtgcccgtgggaggaagaaagtggctgctgctccaactttacctgagcca
gacgttcctccagtcagagcaaaaagaaaccggacttcagcacgcaggggcagaggtgca
gctgctgtagtgtga
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