Lagopus muta (rock ptarmigan): 125698304
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Entry
125698304 CDS
T09141
Symbol
CSPG4
Name
(RefSeq) chondroitin sulfate proteoglycan 4 isoform X1
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lmut00535
]
125698304 (CSPG4)
04091 Lectins [BR:
lmut04091
]
125698304 (CSPG4)
Proteoglycans [BR:
lmut00535
]
Cell surface proteoglycans
Others
125698304 (CSPG4)
Lectins [BR:
lmut04091
]
C-Type lectins
Others
125698304 (CSPG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
125698304
NCBI-ProteinID:
XP_048812437
LinkDB
All DBs
Position
10:17681267..17701294
Genome browser
AA seq
2357 aa
AA seq
DB search
MQLPTTRSPATGRLLEGVSRSYAALGLPLQGSFPRPTLSFPFPVSFFGDSFVEMPLADAS
RTVRLRLQLYTGQGSGLLFLAAGQPDHLLLQLRAGTLQARLRLGSEEVTLQSPAELQLDN
LALHDVELLLEDGRMTLTVDGLFNSSVDIAGPMRELDIQHGLYAGGTGSLNLPYLAGVSP
PFRGCLHTVTFNGLDVLSPLSSDSSSKVFHQVQEGCSAQFSAEPEEPIGFLGPQSYIAFP
TWEAREEGTIEFVITTSITQAPLIYHAGLENDFFYLEISNGRLRGFVEKGSGVIVLHNNI
FISDEQQHYVKVYTDTHKLEILIDYYASSTSNRGINSRLDLQGNLFIGGLNDKALQRLRA
HHLAFTSVWTLTNTSFVGCVEDLRINQQRRSLQDAVVTRDVTVGCGRQEHYWDYEEAYEQ
DEAPTSPPPDAWHGALGLAEPCQPDGSFPPAFANVSRLLHVSPLIVSEGGMAFVEWKHAQ
PTVDLGLAGIRQSQILFSITSDPRHGELELDIPGSRSRKKFTLLDIVNRKVRYIHDGSEG
PMDQLMLEVTVTAQQGIPECLRQGQTYLLPIMVNPINDAPQVIFPHGNHMTILKHTRKHL
TMDILQALDDDTSCDDLEFQLHGGQQDEGYVEYDFHPGVPIEEFSCRDLEAGNVVYVHQS
GTDLQLTFQVSDGTVPSPTATLRILAIEPNIRLHNNTGLAISQGGAARITTANLSVETNA
VKQQVAILYSLTEPLRYGEIKKQGSTGGEWKKVESFHQQDLEQGRIQYFSTDPEHRQEDV
TEKLRFSVQVGQKVLPNNTFTISIKRATIKMKTMVPLQMKNKRHKNITSRELEAMLEDPN
SAPVPFHYVIIQAPKKGNLELLSNRLTEGFGFTQDDLQRNHLSYSATIRNAQQAEDSFQF
RVHAGEEHSPVYTYTIGIGGDPNAPDLTNMLLTVPEGGQAVISKDHLFVQSLNSMDYIYE
VIEGPAHGRLAWATSLGWPSGEEITEFTNDDILHRRLLYQHDDSETLEDDIPFVAVRQGE
GSSEPEAEEVRGVFRVSIQPINDHTPVQVVNKVFNVVRNGQHLLTTDDIAFTDKDSGFTD
TQLVLARRDILFGSIVSVDDRSHQLYRFTQDDLRKKKILFVHSGADRGWIQLQVSDGLHQ
TTALLEVQASEPYIKVVNNTGLAIPQGSRGSIDSSVLSLETNMDIRSDEEIRFLVTAPPR
WGTVLRGEQPVMAFSQRDLLAGEISYLHNGSRNARDELQFTVEANEVAVEDTLAITIFLD
THPSPLHVVNNKEIHVFQGEAAEIKEEHLLVTHEEIPPQDIVYLVSSPPVSGFLVMVQHG
QDSDEPPSLDPIQSFTQEDINSGQVLYLHSKPEEERDRFVVDVTAGGAEPLAGVAVSLVV
LPATIPLDIHNITVRGGSSATISTAVLNIRSTYFAALDVEFRVLQPPRFGTILNSQRPQD
GGLHSFTWSEVQSQQIQYRQDISRAQADSFTLVANASTSERQSQPGTVFITILPRSTRGP
QLRTNAGLQLREGTAATIGPQTLRAEDEDSPAAEVTFSIQPPANGKVVLRSAPDTALRSF
TQAQIDSGIVLFVHQGPLDGGFAFDLWDGENLSPGHFFLVRAHRQEHISLAKKQSLTLCP
GALQPITSENLQALSSSPAGPAALYYSIEQAPRLGQLRTAHGDEVRNFTQAQVDAGMVFY
QHEMPQKPFWLTQDAIRFRVVAPTTISDSFILLVLISFEAKCPQRSTQLWRNAGLHLVEA
QRAEIGTSLLDASNLLSQIPAPEQDAHDVIFLVTELPVHGQLWVADRLLERSQPFFLQSD
LAAGRLVYVHHENGGTEDRFQFKAWLRPRAQRSIRPPQEGLLISEAFNVTVSSSSSQKPP
QVVKRQGALRVLPNSTITLSRQHLDVAEPHGSPEELVYSLLHSPQTGHLADVRSPQVPIK
RFTQADINAGHVMLVTAARGAQESLVLSLSDGRHPPAHTSLEVVVLPMGSAEPLEVPQEL
NRAMLSPRHVAPQLGEGDALYTITTEPRFGQVQVNRKPAQGFSQAQLERGEVTFTFTKLT
SSEDSFQFLTRSQTMNSTGVVNVTVRALVTARPGSVWPRGTTALLDTSTLDASELANRTR
SIPVFRLHQPSHSSRLIRRPRAPGQPAVPIESFSQRELEQGLVGLEVLDDGDANQQHPHS
DSFTFELVAAGVPPALVSLGYFTEPYNASKSYGVTLLLAPPAPSSLVPQPQGTARSSLNA
SEPGSVPPPTSPSPGEGGTFLGFIEANMFSIIIPICLIILLLALILPLLFYLHKRNKTGK
HHVQGSPASKAKNGAVPEQETFRKTDPNQGIPLTTVNALDGKGTAPPPQGAGVPADPELL
QYCRTSNPALKNNQYWV
NT seq
7074 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcccaacaacgcgcagcccagcgacgggaaggctgctggaaggggtctcccgc
tcatacgcagcgctgggactgccgctccaggggtccttcccccgtccgaccctctccttt
cccttcccagtctcgttcttcggggacagcttcgtggagatgccgctggcggacgcctcg
cggacggtgcggctgcggctccagctgtacaccgggcagggcagcgggctgctcttcctg
gccgccgggcagcccgaccacctcctgctgcaactgcgagccggcaccctgcaggccagg
ctgcggctgggctcagaagaggtgacactgcagtccccggcggagctgcagctggacaac
ctggctctgcatgatgtagagctgctgctggaggatggcaggatgacactgaccgtcgat
ggcctcttcaacagctccgtggacatcgcggggcccatgcgggagctggacatccagcac
ggcctctatgcaggcgggacaggcagcctcaacctgccgtacctcgctggggtcagcccg
cccttcaggggctgcctccacacggtgacattcaatggcctggatgtcctctccccgctg
tcctctgacagcagctccaaggtcttccaccaggtgcaggaaggctgcagcgcacagttc
tctgcagagcccgaggagcccattggattcctggggccgcagtcctacatcgccttcccc
acgtgggaggcgagagaggaggggaccatcgagtttgtgatcaccacgagcatcacccag
gcacccctcatctaccacgcagggctggagaacgacttcttctacctggagatctccaac
gggcgcctgagagggtttgtggagaagggcagtggtgtcatcgtcctgcacaacaacatc
ttcatcagcgacgagcagcagcattacgtcaaggtctacaccgacacccacaagctggag
atcctgattgactactatgcctcatccacatccaaccggggcatcaacagccgcctggac
ctccagggaaacctcttcattggaggcttgaatgacaaagccttgcaaaggctcagggcg
caccaccttgctttcacctccgtgtggaccttgaccaacacctcatttgttggctgcgtg
gaggacctgcgcataaaccagcagcggaggagcctgcaggacgccgtggtgacaagggat
gtcacagttggctgtggaaggcaggagcactactgggactacgaggaggcttacgagcag
gacgaggcacccacctcaccgccgcctgatgcctggcacggagctctgggcctggcagaa
ccgtgccagccagatggcagcttcccacctgccttcgccaatgtcagccggctgctgcac
gtcagccccctcatcgtctccgaagggggcatggcctttgtggaatggaaacacgcacag
cccacggtggacttgggccttgcaggcatccggcagtcccaaatcctcttcagcatcacc
agtgaccccaggcatggtgagctggagctggacatccccggttcccggagcagaaagaag
ttcaccttgttggatatcgtgaatcgcaaagtcaggtacatccacgacggctctgagggc
cccatggaccagctgatgctggaggtgacagtgactgcccagcaagggatccctgagtgc
ctgcggcaggggcagacctacctgctccccatcatggtcaaccctatcaacgatgccccg
caggtgatctttccccatgggaaccacatgacaatcctgaagcacacacggaagcacctg
accatggacatcctgcaggccctggatgacgacacgtcctgcgacgacctcgagttccag
ctgcacggcgggcagcaggacgagggctatgtggaatacgacttccaccccggggtgccc
atcgaggagttctcctgcagggacctggaagcaggcaacgtggtctacgtgcaccagagc
ggaacagatttgcagctcactttccaggtgagtgatggcacagtgccgagccccactgcc
accctgaggatcctcgcaatagagcccaacatccgcttgcacaacaacactgggctcgcc
atctcccaaggaggagctgcgcgtatcaccacggccaacctgtccgtggagacaaatgct
gtgaagcagcaagttgccatcctgtacagcctcacagagcccctcaggtacggtgagatc
aagaaacaagggagcacaggaggggaatggaaaaaagttgagtccttccaccagcaagac
ctggagcaagggcgtatccagtatttcagcacagatccagagcaccggcaggaagatgtc
acagagaagctaagattcagtgtccaggtgggacagaaggtcttgccaaacaataccttt
accataagtattaaaagagccaccattaagatgaagaccatggtccccctccagatgaag
aacaagcggcacaaaaacatcaccagtagagagctggaggcaatgctggaagacccaaac
tctgccccagtccccttccactatgtgatcatccaggctcccaagaaggggaacctggag
ctcctcagcaacaggctgactgaaggctttgggtttacccaggacgatctgcagagaaat
cacttgagctacagtgcaaccatcaggaatgctcagcaggctgaggacagtttccagttc
cgtgtccatgccggcgaggagcactcccctgtgtacacctacacgattggcatcggtggg
gaccccaacgcacccgacctgaccaatatgctcctgaccgtgcctgaaggcgggcaggct
gtcatctccaaggaccacctcttcgtgcagagcctgaacagcatggactacatctacgaa
gtgattgaggggccggcacatggcaggctggcttgggctacatcccttggctggccctct
ggcgaggaaatcacggagttcaccaatgatgacatcctccaccgccggctgctctaccag
cacgatgactctgagaccctggaagatgatatcccttttgtggccgtcaggcagggcgag
ggcagctccgagcctgaggcagaggaggtgagaggtgttttcagggtctcgatccagcct
atcaatgaccacactcctgtccaggtggtgaacaaggtcttcaacgtggtgcgcaatggg
cagcacctgctgacgacggacgacatcgccttcactgacaaggactctggcttcactgac
acgcagctggtgctggcaaggagggacatcttgtttggcagcatcgtgtccgtcgatgac
agaagccaccagctctaccggttcacccaggatgacctgaggaagaaaaagattctcttt
gtccattctggagcagaccggggctggatccagctgcaggtttccgatggcctccaccaa
accactgccctcctggaggtacaagcatcagagccctacatcaaagtagtcaacaacact
gggctagccatcccccaggggagccgagggagcatcgattcctctgtactcagcctggag
accaacatggacatcaggtcagacgaagagatacggttcctggtaacggccccaccaaga
tgggggactgtgctgcgaggggagcagccggtcatggccttctcacagagggacctgctg
gcgggagagatctcctacctccacaatggcagcagaaatgcccgggatgagctccagttt
actgtggaagcaaacgaagtggcagtagaggacacactggccatcaccatcttcttggac
acccaccccagccccctgcacgttgtcaacaacaaggagatacatgtcttccagggggaa
gctgctgagatcaaggaggagcacttgctggtgacccatgaggagatcccaccccaggat
atcgtctacctggtaagcagccccccggtctctggctttctggtgatggttcaacacggc
caggactcagatgagcctcccagcctggaccccatccagtccttcactcaggaggacatc
aacagcggccaagtgctctacctgcactccaagccagaagaggagcgggaccggtttgtc
gtggatgtgacggctgggggagcagagccactggcgggggtggctgtcagcctggttgtg
ctccctgccaccattcccctggacatccacaacatcacagtgcggggaggaagctccgcc
accatctccacagctgtcctcaacatccgcagtacctactttgcagcccttgacgtggag
ttcagggtgctccagcctccccgctttggcaccatcctgaacagccagcggccccaggat
ggggggctgcacagcttcacctggagcgaggtgcaaagccagcagatccagtaccggcag
gacatttcccgtgcccaggccgacagcttcacgcttgtggccaacgcctcgacctccgag
aggcagagccaacctgggaccgtcttcatcaccatcctgccccgcagcaccagggggcca
cagctgcgcaccaatgccgggctccagctgcgggaaggcaccgctgccaccatcggcccc
caaactctgcgtgctgaggacgaggacagcccggcggccgaggtcaccttctccatccag
cctccagccaacggcaaggtggtgctgcgctctgcgcccgacacagcgctgcggagcttc
acgcaagcgcagattgacagcggcatcgtcctctttgtgcaccaagggcccctggatgga
ggcttcgcctttgacctgtgggatggtgagaacctgtctcctgggcacttcttcctcgtc
agggcgcacagacaggagcacatcagcctggccaagaagcagagcctcaccctctgccca
ggtgccctgcagcccatcaccagcgagaacctgcaggcattgagcagcagccccgccggc
cctgctgccttgtactacagcatcgagcaggcaccgcgcctggggcagctgcgcaccgct
catggggatgaagtcaggaacttcacccaggcccaggtggatgctgggatggttttctac
cagcacgagatgccgcagaagcccttctggctcacccaggatgccatccgcttccgcgtg
gttgctcccaccaccatctctgactccttcatcctgctggtgctgatatcattcgaggca
aagtgtcctcagcgctcgactcagctatggagaaatgcaggtctccatcttgtagaggct
caacgggcagagatcggcacctcactgctggatgcatccaacctcctgagccagatccca
gcccccgagcaggatgcacacgatgtcatcttcctggtgacggagctgccggtgcacgga
cagctttgggtggctgataggctgctggagcgctcacagcccttcttcctgcagtcagac
ctggctgctggacgcctggtgtatgtgcaccatgagaatggtggcactgaggaccgattc
cagttcaaggcttggctccggccgcgggcacagcgctccatccgtcctccccaggaaggg
ctgctcatctccgaagctttcaacgtgacggtgagcagcagcagcagccagaagcccccg
caggtggtgaagcgacaaggagcactgcgggtgctgcccaactccaccatcaccttgtcc
aggcagcacctggacgtggcagagccacatggctccccagaggagctggtgtacagtctg
ctgcacagcccccagaccggacacctggccgatgtgcgcagcccacaggtgcccatcaag
cgcttcacacaggcggacatcaatgcaggccatgtgatgttggtcactgcagcccgtggt
gctcaggaatccctggtgctgagcctgtctgatggccggcatccacctgcccacacctct
ctggaggtggtggtgctgcccatgggcagtgcagagccgctggaagtgccgcaggagctg
aatagggccatgctgtccccacggcacgtggctccgcagctcggcgagggcgatgccctt
tacaccatcaccacagagccgaggtttggccaagtgcaggtcaacagaaagccagcacag
ggcttctcacaggcacagctggagcgcggagaggtgaccttcaccttcaccaagctcacc
tcgtccgaggacagcttccagttcctcaccaggtcacaaacgatgaacagcactggggtg
gtgaatgtcaccgtccgtgccttggtgacagcgcgtccgggcagcgtgtggcccaggggc
accacagccctgctggataccagcacgctggatgccagtgagctggccaaccgcacccgc
agcatcccggtcttcaggctccaccagccatcccatagtagccgcctcatcaggagaccc
cgtgcaccaggacagcccgcagtccccattgaatccttcagccagagggagctggagcaa
gggctggtggggctggaggtgctggatgacggggacgcaaaccagcagcacccacacagt
gacagcttcacctttgaactggtggctgctggcgtgccaccagcactggtgtccctgggg
tacttcacagagccctacaatgcctctaagtcctatggtgtcaccctgctcctggcccca
ccagcaccatcgtccctggtgccacagccacagggcacggcacggagcagcctcaatgcc
agcgagccaggctctgtgcccccacccaccagccccagccccggggaaggcggcaccttc
ctaggcttcatcgaggccaacatgttcagcatcatcatccccatctgcctcatcatcctc
ctgctggccctcatcctgccgctgctcttctacctgcacaagcgcaacaagacaggcaag
caccacgtgcagggctcacctgcctccaaggccaagaacggggctgtaccggagcaggag
accttccgcaagacggaccccaaccaaggcatccccctaacgactgtcaatgccctggat
ggcaaaggcacagctccgccaccgcagggtgccggcgtgccagctgaccccgagctgctg
cagtactgccggacatccaaccctgccctgaaaaacaaccagtactgggtgtga
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