Lagopus muta (rock ptarmigan): 125698343
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Entry
125698343 CDS
T09141
Symbol
LINGO1
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1 isoform X1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmut04131
]
125698343 (LINGO1)
Membrane trafficking [BR:
lmut04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
125698343 (LINGO1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRR_9
LRRNT
Motif
Other DBs
NCBI-GeneID:
125698343
NCBI-ProteinID:
XP_048812505
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All DBs
Position
10:complement(17569483..17668562)
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AA seq
619 aa
AA seq
DB search
MQVRDRMLAGEASMRSPILACWQPILLLMLGSILSGSATGCPPRCECSAQERAVLCHRKR
FMVVPEGIPTETRQLDLGKNRIKTLNQDEFANYPHLEELELNENIISAIEPGAFNNLFNL
RTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVY
ISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRL
KVLEISHWPYLDTMTSNCLYGLNLTSLSITHCNLTSIPYVSVRHLVYLRFLNLSYNPIVT
IEGSMLHDLLRLQEIQLVGGQLTTVEPFAFRGLNYLRILNVSGNLLTTLEESAFHSVGNL
ETLILDNNPLACDCRLLWVFRRRWRLNFNKQQPTCSTPEFVQGKEFKDFPDVLLPNYFTC
RRARIRDRKPQQIFVDEGHTVHFVCRADGDPPPAIMWLSPRKHLISTKTNGRLTVFPDGT
LEVRYAQIQDNGTYLCIASNAGGNDTMLAHLHVRSYSPDWPHQPNKTFAFISNQPNESDA
NSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRK
SDAGISSADAPRKFNMKMI
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgagagataggatgttagctggggaggcgagtatgcgcagcccaatcctggcc
tgctggcagccaattctcctcctgatgctgggatccatcctgtccggctctgccacgggc
tgccctccgcgctgcgagtgctctgcccaggagcgtgctgtgctgtgccatcggaagcga
ttcatggtcgtcccggaggggatcccgacggagaccaggcagctagacttgggtaagaac
cgcatcaagacgctcaaccaggatgaatttgccaactaccctcaccttgaagagctggag
ctaaacgagaacattatcagtgccattgaacctggggctttcaacaacctcttcaacctc
aggacgctggggctcaggagtaacagactcaagctgatccccttgggggtgtttactgga
ctcagcaatcttaccaagctagacattagtgagaacaaaattgtgatcctcctagactac
atgttccaggacttgtacaacctgaagtctttggaggtaggggacaacgaccttgtctac
atttcccaccgggccttcagcggcctcaacagcctggagcagctgaccctggagaaatgc
aacctgacctccatccccacggaggccctgtctcacctgcacggcctgattgtgctgcgg
ctgcgccacctgaacatcaacgccatccgggattactcattcaagaggctgtacaggctt
aaggtcctcgagatctcacactggccctacttggataccatgacatccaactgcctgtac
gggttgaacctgacctccttgtccatcacccactgcaacctgacgtccatcccgtacgtg
tcggtgaggcacttggtttacctccgcttcctgaacctgtcctacaaccccattgtcacc
atcgagggctccatgctccatgacctgctcaggctgcaggagatccagctggtgggaggg
cagctcaccacggtcgagccctttgccttccgtggcctcaattacctgcgcatcctgaac
gtgtcaggaaacttgctgaccactctggaagagtcggccttccactcggtgggcaacctg
gagacgctcatcctcgacaacaaccccttagcctgcgactgtcggctgctgtgggttttc
cgacggcgatggaggttgaacttcaataagcagcagcccacctgctctacccccgagttc
gtccagggcaaggagttcaaagacttccctgacgtcctcctgcccaactacttcacctgc
cgccgggctcggatacgggaccgcaaacctcagcagatctttgtggacgaaggccacacg
gtgcattttgtctgtcgggcagacggggatccgccacccgccatcatgtggctttctccc
cggaagcacctcatctcaaccaaaaccaacgggcggctcactgtcttccctgacggcacg
ctggaggtgcgctacgctcagatccaggacaacggcacctacctatgcattgccagcaac
gcgggtggcaacgacaccatgctggcccacctgcacgtgcgcagctactccccagactgg
ccccaccagcccaacaagaccttcgcgttcatctccaaccagcccaacgagagcgatgcc
aacagcacacgtgccaccgtgccttttccctttgacatcaagactctcatcatcgccacc
accatgggcttcatttctttcctgggcgtcgtgctcttctgtctggtgctcctcttcctg
tggagccgggggaaaggcaacaccaagcacaacattgaaatcgagtatgtgccacgcaag
tctgacgcaggcatcagctctgccgacgcaccgcgcaaattcaatatgaaaatgatttaa
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