Lagopus muta (rock ptarmigan): 125698399
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Entry
125698399 CDS
T09141
Symbol
SEMA6D
Name
(RefSeq) semaphorin-6D isoform X1
KO
K06842
semaphorin 6
Organism
lmut
Lagopus muta (rock ptarmigan)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
125698399
NCBI-ProteinID:
XP_048812625
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Position
10:complement(10463809..11071557)
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AA seq
1088 aa
AA seq
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MRLPLLCASVMLMSLSQCRAVSFPEDEDPINIVDYHYSRQYPVFRGRPSGNESQHRLDFQ
LMLKIRDTLYIAGRDQVYTVNLNEVPKSEVTPSRKLTWRSRQQDRENCAMKGKHKDECHN
FIKVFVPRNDEMVFVCGTNAFNPMCRYYRLSTLDYDGEEISGLARCPFDARQTNVALFAD
GKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREI
AVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSI
TDIIEINGIPTVVGVFTTQLNSIPGSAVCAFSMDDIEKVFKGRFKEQKTPDSVWTAVPED
KVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPLMDSAVPSIIEEPWFTKTRVRYR
LTAIAVDHAAGPHQNYTVIFVGSEAGVVLKILAKTRPFSLNDSVLLEEIEAYNHAKCNAE
NEDDRRVISLQLDRDHHALFVAFSSCVIRIPLSRCERHGSCKKACIASRDPYCGWLDHEV
CGRVTPGMLFSLFVSYNHSTGGYVQDVEYGNTAQLGDCHEILPTTATPDYKIFGDPTSDM
KFSSASITTMASIPVISPRVIGSWKPKVTGSRKFVVQDDPNTSDYSDPLSGVPKGVRWEV
QSGESNQMVHMNVLITCVFAAFVLGAFIAGVAVYCYRDVFVRKSRKIHKDAESAQSCTDS
SGSFAKLNGLFDSPVKEYQQNIDSPKLYTNLLTSRKELPPNGDMKSMMMDHRGQPPELAA
LPTPESTPVLQQKTLQAMKSQSDKAHSNLNASRKETPLKSPQFFPSSPPPHSPLSHGHIP
SAIVLPNATHDYNTSFSNSNAHKADKKMQHIDHPLTKPSSKRDHRRSVDSRNTLNDFLKH
LNETTSNPKAIMGDIQVAHQTLMLDPMGNMSEIPPKVPNREASLYSPPSTLPRNSPTKRV
DVPTTPAVPMTSLERQRGYHKNSSQRHSISALPKNLNSPNGVLLSRQPSINRGGYVTPTA
GTKMDYMQGTPVSVHLQPSLSRQSSYTSNGTLPRTGIKRTPSLKPDVPPKPSFVPQTTSV
RPLNKYSY
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgaggcttcctctgctctgcgcctctgtgatgctaatgagtctgtcccagtgccgagct
gtcagctttcctgaagacgaggaccctattaacattgttgactaccactattcaaggcaa
tatccagtatttagaggacgcccttcaggcaatgaatctcagcacagactggacttccaa
ctgatgctgaaaattcgagacacactttatatcgctggcagggatcaagtttacactgta
aacttaaatgaagttccaaaatcagaagttactccaagcaggaaattgacatggaggtca
aggcagcaggacagagagaactgtgctatgaaaggaaaacataaagatgaatgccataac
ttcattaaagtctttgttccaagaaatgacgagatggtgtttgtctgtggaacaaatgca
tttaatcctatgtgcagatactatcggctgagtaccttagactatgatggggaggaaatt
agtggtttggcaagatgcccatttgatgccagacaaaccaatgtcgccctctttgctgat
ggaaaattgtattcagcaacagtagcagatttcctggcaagtgatgctgttatttatcgc
agcatgggagatggatctgccctaagaacaataaagtatgattccaaatggataaaagag
ccacactttctccatgccatagaatatgggaactacgtgtatttcttctttcgagaaatt
gctgtagagcacaataatttaggcaaggccgtgtattcccgtgtggcacgcatatgcaaa
aatgacatggggggttcccagagagtcctggaaaaacattggacttcctttctgaaagct
cggctcaactgctccgttcctggggattcgttcttctactttgatgttctgcagtctatc
acagacataatagaaatcaatggaatccccacagtcgtcggtgtattcactacacagctc
aacagcatccctggttcagcagtgtgtgctttcagcatggatgacattgagaaggtcttc
aaaggtagatttaaagaacaaaaaactcctgactctgtttggacagctgtacctgaagac
aaggtaccaaagccaagacctggctgctgtgcaaaacatggcctagcagaagcttacaaa
acctccattgatttcccagacgaaacattgtccttcatcaaatctcatcctttgatggat
tcagctgttccctcaatcattgaggagccttggtttaccaaaacacgcgtcagatacaga
ttgacagcaattgctgtagaccacgctgctggaccacatcagaactacacagtcatattt
gttggctctgaagcaggagtagtacttaaaatcttggcaaagaccagacctttctctttg
aatgacagtgtgttactggaagagattgaagcatataaccacgcaaagtgtaatgctgag
aacgaggatgacagaagagtcatttcccttcagttggatagagaccaccatgctctgttt
gtggccttctccagctgtgtcattagaattcctctgagccggtgtgagcgtcacgggtca
tgtaaaaaggcatgtattgcttctcgggatccatactgtggctggttagaccacgaggtg
tgtgggagagtgacaccaggcatgctgttctctttgtttgtttcatacaaccacagcact
ggaggatatgtgcaagatgtggaatatggcaacacagcacagcttggggactgccatgaa
attttgcctactacagctacaccagattacaaaatatttggggacccaacatctgacatg
aagttctcctcagcttccattaccacaatggcaagtatcccagttatatcacctagagtg
attggttcctggaaacctaaagtgactggctctcggaaatttgtagttcaagatgaccca
aacacttctgattattctgatccattatcaggtgtcccaaagggtgtaaggtgggaagtg
caatcgggagagtccaaccaaatggtacacatgaatgtcctaatcacttgtgtctttgct
gcttttgtcctgggagcctttattgcgggagtggccgtgtactgttatcgggatgtgttt
gtacggaaatccaggaaaatacacaaagatgcagaatctgctcagtcctgtacggactcc
agcgggagctttgctaaactgaacgggctttttgatagtcctgtcaaggagtaccaacaa
aacattgattcgcccaaactctacaccaacctgctgaccagcagaaaggaattgccacca
aatggtgatatgaagtccatgatgatggaccacaggggccagcctccggaattagctgcg
cttcccactcctgaatccacaccagttcttcagcaaaagactctgcaagccatgaaaagt
cagtcggacaaagcacacagtaatctcaatgcttcacgaaaggaaaccccactaaaaagc
cctcagttttttccttccagtcctccacctcactctcctctgagtcatggacatatccct
agtgctatcgttcttcccaatgctactcatgattacaacacgtctttctcaaattctaat
gcgcacaaggcagacaagaagatgcaacatattgatcatccacttacaaaaccatccagc
aaaagagaccacaggaggtctgttgattccaggaacaccctgaatgattttctgaagcac
ttaaatgaaactactagtaatccaaaagcaattatgggagatattcaagtggcccaccag
actttaatgctggatccaatgggaaatatgtctgagatcccacctaaagttcccaacagg
gaggcatctttatactctccaccatcaactcttccgagaaacagccccacaaaacgagtg
gacgttcccaccacacctgcagtaccgatgacctctttggaaaggcagagaggttatcac
aaaaattcttcacaaaggcattcaatatctgcccttcctaaaaacttaaactcaccaaat
ggtgttttgttatccagacagcccagtattaatcgggggggttatgtgactcccacagca
ggcacaaagatggactacatgcaaggaacgcctgtcagcgttcacctccagccttccttg
tccaggcaaagcagttacacaagcaatggcactcttcctcgtacaggaataaagaggaca
ccctcgttaaaacctgatgtgccaccaaaaccctcatttgttcctcaaacaacatcagtc
agaccactgaacaaatacagttactag
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