Lagopus muta (rock ptarmigan): 125698448
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Entry
125698448 CDS
T09141
Symbol
HOMER2
Name
(RefSeq) homer protein homolog 2
KO
K15010
homer
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
125698448 (HOMER2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lmut03037
]
125698448 (HOMER2)
Cilium and associated proteins [BR:
lmut03037
]
Other cilia and associated proteins
Stereociliary proteins
125698448 (HOMER2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WH1
ZapB_rel
CCDC39
DMPK_coil
FKBP15
GAS
CCPG1_N
PMD1-like
T4SS_LegC2C7
EVH1_PP4R3
TMF_DNA_bd
Rod_CreS
ATG16
MAD
NOCA1_mid
CEP89
Rab11-FIP3
Uso1_p115_C
UPF0242
PH_PHS1
CEP131_C
ODF2_C
FlaC_arch
Phage_scaffold
CCDC113_CCDC96_CC
SPC25_N
LEKR1
Effector_1
CALCOCO1
ERM_helical
ANG-1
CoV_S2
DUF5790
HAP1_N
FUSC
FPP
IPGA1_CC
COG6_N
CCDC57_N
CCDC170_1st
DUF3461
COG3_N
Motif
Other DBs
NCBI-GeneID:
125698448
NCBI-ProteinID:
XP_048812745
LinkDB
All DBs
Position
10:9230747..9280905
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AA seq
383 aa
AA seq
DB search
MCEVGTRPPLAAERGEPPGGAAASERCRDMGEQPIFTTRAHVFQIDPSTKKNWVPASKQA
VTVSYFYDSTRNSYRIISVDGAKVIINSTITPNMTFTKTSQKFGQWADSRANTVFGLGFP
SEQQLSKFAEKFQEVKEAAKLARDRSQEKIETSSNHSQESGRETPSSTRASSVNGTDDEK
ASHGGSAEAQLKSENDKLKIALAQSSSNVKKWETELQTLRESNARLTTALQESAASIEHW
KKQFSACKEENDQLRSKIEELEEQCNEINKEKERNAQLSRRLQELETELQDKELELEELR
KQGEIIPQLMSECESVSQQLQDAENKNKDLEEKVRTLRTEVEESKHRQTNLKTELKNFLD
VLDGKIDELHDFRQGLSKLGVDN
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgaagtgggaacccggccgccgctggccgccgaacgcggggagccgcccgggggg
gccgccgcctccgagaggtgccgagacatgggagaacagcccatcttcaccaccagagcc
catgtcttccaaattgaccccagcacgaagaagaactgggtccccgcaagcaagcaggct
gtaactgtttcctacttctatgacagcacgagaaacagctatcggattatcagtgtggat
ggagccaaggtgatcataaacagcacaatcacccccaacatgaccttcaccaaaacctcg
cagaagttcggccagtgggcggatagcagagccaacacagtgtttgggttgggctttccc
tctgagcagcagctgtccaagtttgcagagaaattccaagaagtgaaagaggctgccaag
ctagcaagagacagatctcaagagaaaattgagacctcaagtaatcattcacaggaatct
gggcgtgaaacaccatcttccacccgagcatctagtgtgaatgggacagatgatgagaag
gcatcccacggtggttctgctgaggcacagctcaaatctgagaatgataaactaaaaatt
gctctagcccaaagttcctccaatgtaaagaagtgggagacagagctgcagacactgagg
gagagcaacgcccgcctgaccacagcgctgcaggagtcggctgccagcatagagcactgg
aagaagcagttctcagcctgcaaggaggagaatgaccagctcagaagcaagattgaagaa
ctggaggagcagtgcaatgaaataaataaggagaaggaaagaaacgcacagctgagcaga
cgtctccaggagctggaaacagagcttcaagacaaagagctggaactggaagagctccga
aagcagggtgaaattataccacagctcatgtcagaatgtgaatctgtatctcaacaatta
caggatgctgagaataagaacaaagatcttgaagagaaagtcagaacactaaggacagaa
gttgaagagagcaaacataggcagaccaaccttaaaactgaattaaagaattttttagat
gtactagatgggaagatagatgaattacacgatttccgacaaggactgtctaaacttgga
gttgacaactag
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