Lagopus muta (rock ptarmigan): 125698476
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Entry
125698476 CDS
T09141
Symbol
MYO5C
Name
(RefSeq) unconventional myosin-Vc isoform X1
KO
K10357
myosin V
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
125698476 (MYO5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmut03019
]
125698476 (MYO5C)
04131 Membrane trafficking [BR:
lmut04131
]
125698476 (MYO5C)
03029 Mitochondrial biogenesis [BR:
lmut03029
]
125698476 (MYO5C)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lmut04812
]
125698476 (MYO5C)
Messenger RNA biogenesis [BR:
lmut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
125698476 (MYO5C)
mRNA cycle factors
P-body specific factors
125698476 (MYO5C)
Membrane trafficking [BR:
lmut04131
]
Others
Actin-binding proteins
Myosins
125698476 (MYO5C)
Mitochondrial biogenesis [BR:
lmut03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
125698476 (MYO5C)
Cytoskeleton proteins [BR:
lmut04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
125698476 (MYO5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_22
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
125698476
NCBI-ProteinID:
XP_048812814
LinkDB
All DBs
Position
10:complement(11524552..11555725)
Genome browser
AA seq
1758 aa
AA seq
DB search
MALAELYTQYNRVWIPDSEEVWQSAEITKDYKAGDRFLRVQLEDGTELNYPVDPSALPPL
RNPDILVGENDLTALSYLHEPAVLHNLKVRFVESRLIYTYSGIILVAINPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNSKNQSIIVSGESGAGKTVSARYTMRYFAT
VSKSSSNAHVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDPSYRIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASAMQPEFKHLKLGSAEEFNYTRMGGSTTIEGVDDR
ANMIETQKTFALLGLKEDFQMDVFKTLAAILHLGNLEITAVGDERSSVNLEDNHLNVFCE
LLELNSDKMAQWLCHRKIITTSETVIKPMTKPQALNARDALAKKIYSHLFDFIVERINQA
LQFSGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPHGTDENWLQKLYNNFVNKNTLFEKPR
MSNTSFIIQHFADKVEYKCEGFLEKNRDTVYEVLMEILKESKFHLCASFFQDNPAPISPF
SSTISIKSARPVLKSPNKQLRMTVGSKFRSSLSLLMETLNATTPHYVRCIKPNDEKQPFE
FDSKRVAQQLRACGVLETIRISAQSYPSRWTYIEFFSRYSILMTQQELSFNDKKQICKIV
LQRLIQDPNQYQFGRTKIFFRAGQVAYLEKLRSDKLRHACIVIQKSVRGWLQRRRFLRMK
QAAVTIQQYCRGQRAVRQAITAQALKQTWAAIIIQKYCRGYLVRKLCQLIQVAAVTIQAY
TRGFLARRKYRKMLEEHKAVILQKYARAWLARRRFQNIRRFVLNIQLSYRVQRLQKKIEE
QSKENHGLLERLTNLASTHMNDLDTIQKLESELEKLAAQKRTHEEKGKKYKEDSEQKILK
LESQIKELREQKETLEVKLQEKTEEMKEKMDDLTKQLFDDVRKEESQRMILEKNFQSQKQ
DYEKEIESLKGEIKVLREEKTQLQQQMQQEIAIQDDLKIEVGQLTKQVQKIPELQKEIEL
LQMQKLDVEKQAQSQKREMREKMSEVTKQLLESYDFEDVRSRLSTEDLEHLNEDGELWFA
YEGLKKATRVLESHFQSQKENYEKEIEGLNLKVEHLSQDINHLQKLFREENDINDGIRLE
VSRLTSENLVIPDLKQQVSELENQKLDLENRLQEQTAKLKEMSNRLHHEPEGDRTLRRTN
EIQNEMDVTEKGRLNVITQEMEGLSNGLKQDEIQAEVKSKMKQETTRLTVENMDLEEELD
MKDRIIKKLEDQIKTLTKTIEKGNEVSVSALSKEYIGMMEYKREDEERIVQNLILAVSLR
SALGTSVYFLPSPLQRYLKPRGVVVNMIPGLPAHILFMCVRYADYLNDADMLKSFINVTI
GGIKQAVKENSEDFEMLSFWLSNTYYFLNCLKQYSGEEEFMKYNTPRQNKNCLKHFDLSE
YRQVLSDLAIRIYHQFILVMENSIQHMIVPGMLEYESLQGISGLKPTGFRKRSSSIDDTD
TYTMTSILQQLSYFYSTMCQNGLDSELLKQAVKQLFFLIGAVTLNSLLLRKDMCSCRKGM
QIRCNISYLEEWLKDKNLQSSNAKETLEPLSQAAWLLQVKKITDDDAKEICEHCTSLSTV
QIVKILNSYTPIDDFEKRVTPSFVRKVQAMLNSREDGPQLMLDTKYHFQVTFPFTPSPHD
LETIQVPSSFKLGFLTRV
NT seq
5277 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggccgagctgtacacacagtacaacagggtttggattcccgatagcgaagaa
gtctggcagtctgcagaaatcacaaaagactacaaagcaggagaccgttttctccgtgtg
caattagaagatggaactgagctcaattaccctgttgatccatctgctttgccacctctg
agaaatcctgacatccttgttggtgaaaacgacctgacagcactcagctacctccacgaa
cctgctgttctgcacaatcttaaagtccgttttgtggagtctcggctcatctacacctat
agtggaataattttggttgcaataaatccctacaagcagttgccaatatatggagatgct
attattcatgcgtatagtgggcaaaacatgggggacatggatcctcatatatttgctgtg
gcagaagaggcatacaagcaaatggcaagaaatagcaagaatcaatctattatagtcagt
ggagaatcgggagctggaaagactgtgtctgcaagatacactatgaggtactttgccacc
gtgagtaagtcaagcagcaatgcacatgtggaggataaagttttggcatccaatccgata
accgaggctgttggcaatgcaaaaaccacacggaatgataacagcagtcggtttggaaaa
tacactgaaatcagttttgatccaagttaccgaatcattggagccaacatgaggacgtac
ctgctggagaaatccagagttgtcttccagtcagagaatgagagaaattaccatatattt
tatcagctctgtgcatctgctatgcaacctgaattcaagcatcttaagttgggaagcgcg
gaagaatttaactacacgagaatgggtggcagtacgactattgaaggagttgatgacaga
gcaaatatgattgagactcagaagacgtttgccttactgggtctgaaagaggattttcag
atggatgtttttaaaacgctggcagcaatcctgcacttaggcaacttggaaataacagca
gttggagatgagaggtcatccgtcaatctggaagacaatcatctcaatgtattctgtgag
cttctggaattaaacagtgacaaaatggcacagtggttgtgccaccgaaagattatcact
acttcagagactgtaataaagccaatgacaaaacctcaggctcttaatgcaagggatgct
ttggcaaagaagatctactctcatttgtttgactttattgtggaaagaattaatcaagct
ttgcagttctctggcaagcaacatacttttattggtgttctggatatttatggctttgaa
acatttgatgtgaacagttttgaacaattttgcatcaattatgccaatgaaaaactacag
cagcagtttaacctgcatgtctttaaacttgaacaagaagaatatatgaaggaagatatc
ccgtggactttaatagatttctatgacaaccaacctgtcattgaccttattgaagctaaa
atgggaattttagagcttttggatgaagagtgcttgttgccccatggaacagatgagaac
tggcttcaaaagctgtataataattttgtcaacaaaaacacgctctttgaaaagccgagg
atgtcaaacacgtctttcatcattcaacactttgctgataaggtagaatataagtgtgaa
ggatttctggaaaaaaacagggatacggtgtatgaagttttgatggaaattttgaaagag
agcaagtttcatctgtgtgcaagcttttttcaagacaatccagcacccatttcacctttc
agttcaactataagcatcaaatctgcaagacctgtcctcaagtcacccaacaagcagctc
cggatgacagttggcagtaagtttcggagttctttgtctctactcatggagacccttaac
gcaaccacccctcactacgtgcgatgcataaagccaaatgatgagaagcagccttttgag
tttgactcaaaaagggtggctcagcagctgcgagcatgtggtgttttggaaaccattcga
attagtgcacagagctatccgtccagatggacttacattgagtttttcagccgctacagc
atccttatgacacagcaggagctctctttcaatgataagaaacagatctgcaagattgtt
ttgcagcggcttatccaggatcctaaccagtatcagtttgggagaacgaaaattttcttc
agagcaggacaagttgcttacttagagaaactgcgctcagacaaactgaggcacgcctgc
atcgtgatccagaagagcgttcggggctggctgcagcgccgcaggttcctgcgcatgaag
caggcggccgttaccatccagcagtactgccgtgggcagcgcgccgtgcggcaagccata
actgcacaagctctgaagcaaacatgggcagctataattattcagaaatactgccgaggt
tacctcgtccgtaagctttgccagctcatccaggtggctgctgtaacaatccaggcttat
accagaggatttctagcaaggaggaaataccggaagatgcttgaagaacacaaggctgtg
atccttcagaaatacgcccgtgcgtggctcgccaggcgcaggtttcagaacatccggcgg
tttgtactgaacatccagctttcgtacagagttcagcggctgcagaagaagatagaagaa
cagagcaaagaaaatcatggcttgctggaacgattgactaacctggcttcaactcatatg
aatgacttggatacaattcagaaacttgaatcagagcttgaaaagttagctgctcaaaag
agaactcacgaggagaaagggaaaaaatataaagaggacagtgaacagaaaatattgaaa
cttgagagtcagattaaagagttacgagaacagaaggagactttagaagtaaagctgcaa
gagaaaacagaggaaatgaaagagaaaatggatgacctcacgaagcaacttttcgatgat
gtacgaaaagaagaaagtcagagaatgatacttgagaaaaatttccaaagtcagaaacaa
gactatgaaaaggaaattgaatcgctcaagggagaaataaaggttctcagagaagaaaaa
acgcagctacagcaacaaatgcagcaagagattgccattcaggatgacctgaaaatagaa
gtaggacaacttacaaaacaagtgcagaaaatacctgagttgcaaaaggaaattgaactg
ctgcagatgcagaaactggatgttgaaaaacaggcccaatcacagaagagagagatgagg
gaaaagatgtcagaagttacaaaacagcttcttgaaagctacgattttgaagatgtcaga
agcaggctgtctacagaggatctggaacacttaaatgaagatggagaattgtggtttgct
tatgaaggcttgaaaaaagctacaagagtactggaaagtcacttccaatctcagaaggaa
aactatgaaaaggagattgaaggtttgaacttgaaagttgaacatcttagccaagatatt
aatcatctacaaaaactatttcgagaggaaaatgacataaatgatggaattcggcttgaa
gttagcaggctaacttcagaaaacctggtgatcccagatcttaaacagcaagtttctgag
cttgagaaccaaaaattagaccttgaaaatcgtcttcaagagcagactgcaaagttgaaa
gagatgtctaaccggctgcatcatgagccagaaggggacagaacactaagacgaacaaat
gagatccagaatgaaatggacgtaacagaaaaagggaggttgaatgtcataacccaagaa
atggaggggctgagcaatggtttgaagcaagatgaaatccaggctgaagtaaaaagcaag
atgaagcaagaaacaactcggcttactgtggaaaacatggaccttgaagaagaactagac
atgaaagatagaataataaagaaattggaggatcagatcaaaactcttaccaagactatt
gaaaaaggcaatgaagtttctgtgtcagctttgtccaaagagtacattggaatgatggag
tacaaaagagaggatgaagaaaggattgttcaaaatctgatcctcgctgtaagtctcagg
agcgctcttggaacttcagtttactttcttcctagtcctctacaaagatatttaaagcca
cgtggagttgttgtcaatatgatacctggccttccagctcacatcctattcatgtgtgtg
aggtatgcagattatctgaatgatgctgacatgctgaaatctttcataaatgtaaccatt
ggtggtataaaacaagctgttaaggaaaattcagaagattttgagatgttgtctttttgg
ctttccaatacatactattttcttaactgcttgaagcaatacagtggggaagaggaattt
atgaaatacaatacccctcgtcagaataagaactgcctgaagcattttgatctctcagag
tacagacaagttctcagtgatttggccattcggatctatcaccaattcattcttgtaatg
gagaatagcattcagcacatgatcgtaccaggtatgctggaatacgagagtctccaggga
atttctggcttgaaacctacagggttccgtaaacgttcctctagcattgatgacacagat
acctacacaatgacatctatcctgcagcaactcagctacttttatagtacgatgtgccag
aatggcctggactctgagcttctcaagcaggcggtgaagcagcttttctttctcattgga
gcggtcaccctcaatagtctcctcctccgcaaggacatgtgctcttgtaggaaaggaatg
cagataagatgtaatatcagctatttggaagaatggcttaaagacaagaatcttcaaagc
agcaatgccaaagaaactttagagcctctgtctcaagcagcctggctccttcaggtcaaa
aagatcactgatgatgatgccaaagaaatatgtgaacactgcacatcgctttccactgtg
cagatagtgaagatcctcaactcatacactccgatagatgattttgagaaaagagtgact
ccgtcgtttgttcgcaaagtccaggctatgctaaacagtcgcgaggacggaccgcagctg
atgcttgataccaaataccacttccaagtgacgtttcctttcacaccctctccacatgat
ttagaaacgatacaagtccccagcagcttcaaacttggctttctcacaagggtttag
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integrated database retrieval system
