Lagopus muta (rock ptarmigan): 125698542
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Entry
125698542 CDS
T09141
Symbol
MBD4
Name
(RefSeq) methyl-CpG-binding domain protein 4 isoform X1
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
125698542 (MBD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lmut03036
]
125698542 (MBD4)
03400 DNA repair and recombination proteins [BR:
lmut03400
]
125698542 (MBD4)
Chromosome and associated proteins [BR:
lmut03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
125698542 (MBD4)
DNA repair and recombination proteins [BR:
lmut03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
125698542 (MBD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
125698542
NCBI-ProteinID:
XP_048812929
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Position
11:complement(19403376..19406561)
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AA seq
365 aa
AA seq
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MERARRRRAPLGGRSGACGAEGTTLRSGRALAERCHHAGTAGGATAPAGNGVRNGGARSS
RSDGSETRRGEGGKTERRPNGAGEEAAGRAGRDGGARRSSVGSNGESARSERRRAARGRR
EVERRAGCAEPAADGRNGRQEPHAAPAAPGSQRSESDPEMGSDGLRPAGDESFAAAKIRR
EESVPRTQVDRRKTSPYFSSKYSKEAPSPPRRKAFRKWTPPRSPFNLVQETLFHDPWKLL
IATIFLNKTSGKMAIPVLWEFLRKYPSPEVARTADWKEMSELLRPLGLYALRAKTIIKFS
DEYLHKQWKYPIELHGIGKYGNDSYRIFCVNEWKEVRGAAVQPQDHKLSVYHTWLWENYE
KLSGD
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggagcgagcgcgtcggcggcgcgcgcctctgggaggtcggagcggcgcgtgcggcgcc
gaaggaacgacgctgcggtccggacgggcgctggcggagcgctgccatcacgccggcaca
gctggcggcgccacggccccggctgggaacggggtgcggaacggcggagcgcggagttcc
cggagcgatgggtccgagacgcggcgcggggaaggcggcaagacggagcggcgcccgaac
ggcgctggagaggaggcggcggggagagccgggcgggacggcggagcgaggaggagctcc
gtaggaagtaacggggagagcgcacggagcgagaggaggagagcggcgcggggccggcgg
gaagtggagcgccgggcgggatgcgcggagccggccgcggatgggcggaacggccgccaa
gagccgcacgcagcgcccgcggctccgggatcgcagcgctccgaatccgaccccgaaatg
gggagcgacggcttgcggcctgctggcgacgagagcttcgcggcagctaaaatacggcga
gaagaatctgtcccacggacacaagtggacaggaggaaaacgagtccgtatttttcaagt
aaatacagtaaggaagctcccagcccgcctaggaggaaggccttcaggaaatggactcct
ccacgctccccttttaatttggtccaagaaacacttttccacgatccgtggaaacttctc
attgcgaccatatttctcaataagacttcaggtaaaatggcaattcctgtgctctgggag
ttcctcaggaagtacccttcccctgaagtagccagaactgcagactggaaagaaatgtca
gagctgctcagacctctcggcctctatgcgctcagagcaaaaacaataatcaagttttca
gatgagtacctgcacaagcagtggaagtaccccattgagctgcacggaatcggaaagtac
ggaaatgactcctacagaatcttctgcgtcaatgagtggaaagaggtgcgcggtgctgct
gtgcagcctcaggaccacaaactgagcgtctaccacacatggctctgggaaaactatgag
aagctgagtggggactga
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