Lagopus muta (rock ptarmigan): 125698547
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Entry
125698547 CDS
T09141
Symbol
DCAF1
Name
(RefSeq) DDB1- and CUL4-associated factor 1 isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lmut01001
]
125698547 (DCAF1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lmut04121
]
125698547 (DCAF1)
Enzymes [BR:
lmut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
125698547 (DCAF1)
Protein kinases [BR:
lmut01001
]
Serine/threonine kinases: Other
Other
125698547 (DCAF1)
Ubiquitin system [BR:
lmut04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
125698547 (DCAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WDR55
ANAPC4_WD40
LisH
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
WD40_WDHD1_1st
PBP_sp32
Motif
Other DBs
NCBI-GeneID:
125698547
NCBI-ProteinID:
XP_048812944
LinkDB
All DBs
Position
11:231301..283494
Genome browser
AA seq
1505 aa
AA seq
DB search
MTSGSGHVDSKAELTTLLEQWEKEHGSGQDMVPILTRMSELIEKETEEYRKGDPDPFDDR
HPGRADPECMLGHLLRILFKNDDFMNALVNAYVMTSREPPLNTAACRLLLDIMPGLETAV
VFQEKEGIVENLFKWAREADQPLRTYATGLLGGAMENQDIAANYRDENSQLVALVLRRLR
ELQVTEMTTKQENKRPSPRKVPSDSLLPLDEEAVDMDYGEMAVDGEQEEVAGDMEISFHL
DSSHKTSSRVNSSTKLDDGGLRKSKSGKQHERDGFRKAKQKLGFPASEPERIFVELSNSS
WSEMSPWVIGTNYTLYPLTPAIEQRLILQYLTPLGEYQELLPIFMQLGSRELMMYYIDLK
RTNDVLLTFEALKHLASLLLHNKFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYLSYN
QDAMERVCMHPHNVLSDVVNYTLWLMECSHASGCCHATMFFSICFSFRAVLELFDRHDGL
RRLVNLISTLEILNLEDQGALLSDDEIFASRQTGKHTCMALRRYFEAHLAIKLEQVKQSL
QRTEGGVLVHPQPPYKACSYTHEQIVEMMEFLIEYGPAQLYWEPAEVFLKLSCVQLMLQL
ISIACNWKTYYARNDTVRYALDVLAILTVVPKIQLQLAEPVDVLDEAGSTVSTVGISIIL
GVAEGEFFIHDAEIQKSALQIIINCVCGPDNRISSIGKFISGTPRRKLPQAPKSSEHTLA
KMWNVVQSNNGIKVLLSLLSIKMPITDADQIRALACKALVGLSRSSTVRQIISKLPLFSS
CQIQQLMKEPVLQDKRSEHVKFCKYAAELIERVSGKPLLIGTDVSLARLQKADVVAQSRI
TFPEKELLLLIRNHLISKGLGETASILTKEADLPMTAASHSSAFTPVAAAASPVALPRTP
RIANGISARLSSHTSVGSAATSVHAQARPPASQGPLALPGPSYASNSPLIGRISFVRERP
SPCNSRKIRVLRQKSDHGAYSQSPAIKKQLDRHLPSPPTLDSIITEYLREQHARCKNPVA
TCPPFSLFTPHQCPEPKQRRQAPTNFTSRLTRRAAFPKYGGVDGGCFDRHLIFSRFRPIS
VFREANEDESGFTCCAFSARERFLMLGTCTGQLKLYNVFSGQEEASYNCHNSAITHLEPS
RDGSLLLTSATWSQPLSALWGMKSVFDMKHSFPDDQYVEFSKHSQDRVIGTKGDIAHIYD
IQTGNKLLTLFNPDLANNYKKNCATFNPTDDLVLNDGVLWDVRSAQAIHKFDKFNMTISG
VFHPNGLEVIVNTEIWDLRTFHLLHTVPALDQCRVVFNYTGTVMYGAMLQADDEDELLEE
RMRSPFGSSFRTFNATDYKPIATIDVKRNIFDLCTDSKDCYLAVIENQGSMDSMNMDTVC
RLYEVGRQRLAEDEEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDENN
ENAGEDGENDFSPSDDEELANLLEEGDEGEDEDSDADEEVELILGDTDSSDNSDLEDDII
LTLNE
NT seq
4518 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaggatctgggcatgtggactccaaggctgagctcactactttgcttgagcaa
tgggagaaagaacatggcagtgggcaagatatggttcctattctcaccaggatgtctgag
ttgattgagaaggagactgaagaataccgcaaaggggatccagacccttttgatgaccga
caccctggtcgagcggaccctgagtgtatgcttggtcacctactaaggatacttttcaag
aatgatgatttcatgaatgcgctagtgaatgcttatgtgatgacgagcagagaacctcca
ttaaacactgctgcctgcagacttcttctggatatcatgccaggactggaaactgctgtt
gtctttcaggaaaaggaaggaatagttgaaaatctctttaaatgggcacgagaagctgat
cagccactaagaacatatgcaacagggcttttaggaggagctatggaaaaccaagatatc
gctgccaattacagggatgagaattcacaactggtggctttggtgcttcgacggctgcgg
gagttacaggttactgaaatgaccacaaaacaagaaaacaagcgtcccagtcctcggaaa
gtgccatcagattctctgctgcctttggatgaagaggctgtggatatggattatggggag
atggcagtggatggagagcaagaagaagtggctggggatatggagatctcctttcatctt
gattcaagtcacaagaccagtagcagagtcaactcttctacaaagctagatgatggggga
ttaagaaaaagcaaatcagggaaacagcatgaaagagatggcttccggaaggccaagcaa
aaactgggcttccctgcttcagaaccagagcggatatttgttgaactgtccaacagcagc
tggtcagaaatgtccccatgggtgattggcactaattatacactttaccctttgactcct
gccatagagcagaggctcattcttcaatacctgactcccttaggggaatatcaagagcta
ttacccatcttcatgcaactgggatcaagggagctgatgatgtactacattgacttgaaa
cgaaccaatgatgtgctgcttacttttgaagcccttaagcatttggcatcgttgctgctg
cataacaagtttgcaaccgagtttgttgctcacggaggagtgcaaaagttgctggagatt
cctcgtccttccatggcagccacaggagtttccatgtgcttgtattatttatcttacaat
caagatgcaatggaaagggtgtgcatgcacccccataatgtgctttcagatgtagtgaac
tacaccttatggctaatggagtgctcccatgcctcaggctgctgtcatgctactatgttc
ttctccatttgcttctcctttcgtgctgtcctggagctcttcgacaggcacgatggcctt
cgtcgtctggttaacctgataagtacccttgaaatcttaaacttggaagaccaaggagct
ctcttgagtgatgatgagatctttgccagtcgccagactgggaagcacacctgcatggcc
ttgcggagatactttgaagcccaccttgctatcaaacttgaacaggtgaagcagtcactc
cagcgcactgaaggtggtgttttggtccatccacagcccccatacaaggcctgttcctac
actcatgagcagattgtagagatgatggaattcctcatcgagtatgggccagcacagctc
tactgggagccagcggaagttttccttaaattgtcttgtgtccagctcatgcttcagctc
atttcaatagcatgtaactggaagacgtactatgcaaggaacgacacagtgcgctatgct
ttggatgtgctagccatcctgactgtggttcctaaaatccaactacagctggcagaacct
gtggatgtgttagatgaagctggatctaccgtttccactgtgggtattagtatcatcctt
ggagttgctgagggtgaatttttcatccatgatgctgagattcagaaatcagcccttcag
atcatcatcaattgtgtctgcggcccagataaccggatctccagtattggcaaattcatc
tctggaactcctcggcgaaagcttcctcaggcccctaagagcagtgagcatacactggct
aagatgtggaatgtagtgcagtccaacaatggcatcaaagtgctgctgtcattgctgtct
ataaagatgccaatcacagatgctgaccagatccgagcattagcctgcaaagccttggtg
gggctctcacgcagcagtactgtccggcagattatcagcaagctcccactcttcagcagc
tgtcaaattcagcagctgatgaaagagccagtgcttcaggacaagcgcagtgagcatgtg
aagttctgtaaatatgctgctgaactgatagagcgtgtctctgggaagccattgctgatt
ggcacagatgtctccctggctcggttgcagaaagcggatgtggtggctcagtcaagaatc
acgtttcctgagaaggagctgctgctcctgattcggaaccatctcatctctaagggccta
ggagaaaccgcatctatccttactaaagaggctgacctacccatgactgcagcatcccat
tcatctgccttcacccccgttgcggctgctgcctctcccgtggccctgcctcgcactcct
cgcatagctaatggcatctcagcccgtttgagtagccacacttctgtaggttctgctgcc
acatctgtccatgctcaggcaaggccacctgcatcccaaggtccacttgcccttccaggc
ccttcttatgctagcaactctcctctgattggcaggattagctttgtcagggagaggcca
tctccctgcaacagcagaaaaataagagtgttgcgacaaaaatcggaccatggcgcatac
agccagagcccagctatcaaaaagcagctggacagacaccttccttccccacccacactg
gacagtataatcacagagtaccttagggagcagcatgcccgctgcaaaaaccctgttgca
acctgtccccctttctctctctttactccccaccaatgtcctgagccaaaacagaggcgc
caagcgccaactaactttacctcacggctgacccgcagggcagcctttccgaagtacgga
ggggtggatggtggctgctttgatagacatcttatatttagcaggttccgtccaatatct
gtgttccgggaagcaaatgaggatgagagtggctttacctgttgtgctttttctgcacgt
gaacgattcttaatgctgggtacttgcacagggcagttaaaactatacaatgtatttagt
ggacaggaagaggcgagttacaactgccataactctgctatcacacatcttgagccgtca
agggatggatccttattgctgacatctgctacgtggagccaacctctgtctgcgttgtgg
ggaatgaagtctgtctttgatatgaagcattccttccctgatgaccaatatgtggagttc
agcaagcactctcaagatagagtcattggcacaaaaggagacattgcccatatctatgat
attcagaccggcaacaagctattgactctgtttaacccagatctcgccaataactacaag
aagaactgtgccacatttaaccctactgatgaccttgtcctaaatgatggtgttctctgg
gatgtcagatcagcacaagccatccacaagtttgataaattcaacatgaccatcagtggt
gttttccatcccaatgggttagaggtcatagtcaacacagaaatttgggacctccgaact
ttccatttgttacatacagttcctgcgctggatcagtgtcgtgtggtcttcaactatacg
ggcacagttatgtatggagctatgttgcaggcagatgatgaagatgaacttctggaggag
agaatgagaagtccttttggctcttctttcaggacgttcaatgcaactgattataaaccc
atagctaccatagatgtaaagcggaatatctttgacttgtgcacagacagcaaggattgc
tatctggctgtcattgagaaccaaggcagcatggattccatgaacatggatacagtttgc
agactgtatgaagtgggtaggcagcgtttggcagaagatgaagaggatgaagaagaagat
caggaggaagaagaacaagaggaagaagatgatgatgaagatgatgatgatacagatgac
cttgatgaactagatacagaccagctactggaggctgagttggaggaggatgagaacaat
gagaatgctggtgaggatggagaaaatgacttttcgccctccgacgatgaggaacttgcc
aacctcctggaagagggtgatgagggtgaagatgaagactctgatgctgatgaggaagtt
gagctgattcttggagatactgacagctccgataattccgacttggaagatgacataatc
ttgactctgaacgagtga
DBGET
integrated database retrieval system
