Lagopus muta (rock ptarmigan): 125698688
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Entry
125698688 CDS
T09141
Symbol
CHL1
Name
(RefSeq) neural cell adhesion molecule L1-like protein isoform X1
KO
K06758
L1 cell adhesion molecule like protein
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lmut04515
]
125698688 (CHL1)
Cell adhesion molecules [BR:
lmut04515
]
Immunoglobulin superfamily
L1 family
125698688 (CHL1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
ig
Ig_2
Bravo_FIGEY
V-set
Ig_VEGFR-1-like_5th
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_VIN3
VEGFR1-3_N_Ig-like
C2-set_2
Ig_PTPRO_5th
Motif
Other DBs
NCBI-GeneID:
125698688
NCBI-ProteinID:
XP_048813301
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Position
11:17141179..17250360
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AA seq
1225 aa
AA seq
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MEMLLSTKRITICLFFFVLSLAAAIEIPLSVPQLPTIKEQSETQVAYPFDENFTIKCEAS
GNPQPTFNWTKDGKPFDLSSDPRIITRNNSGTFVIQNHGIITNFQGKYRCYASNVLGTAM
SKEIELIVPNVPKFPKEKIEPLDVEHGDSVILHCNPPKGIPPLHIYWMNIDLQHIPQDER
VSMSLKGDLYFANVEENDSRSDYCCFAAFPKLRTIVQKMPMTLKVSRFKHANDSGSPNAA
VTKANFIKERKPKLLIPPESAGSSSSVTVIKGGVLQLECIAEGLPTPHLSWVKVTENLPK
DKPVTDKFGKVLKIENVSAADEGTYQCMASNPVGRAKHEFHVHVEEPPRWIKEPRGGVYS
LGENLLLLCEAIGNPEPTIQWKLNGMPIDSRTFRGRVSDGELSLTNLQLQDTAVYHCEAS
NKHGTLLASANVNVLNIAPLILTSDGENYAAVVGYSAFLHCEIFASPAADVRWTKDDSIE
PLSALRYELNKNGTLEIKETKKEDAGSYACWVANSVGKRAITANLDIRDATKIVITPKNP
QVLKSHSILLKCQSEYDSHLKNSFKLSWRKDGYELSVSSIQDSRIIMDMDTLFISNVMPE
DQGIYTCVASTSLDSVTAKTRLIVLDVPDPPEDLQLSEHQNRSVRLSWKAGASHNSPVNE
SIIEFEESRWEPGRWQELARAPGNTTTTLLSLAPYTNYQFRVVSVNAVGRSQPSKPSLRY
LTPPAAPDKNPENIRVEASEPNEMVMKWEPLKSMERNGPGLEYKVSWRQRGVETEWNEET
VKKHSLTLRNTPTFVPYEIKVQAINNLGAGPEPNITTGYSGEDIPDAAPSGVSVDIVNST
LVKVFWFGIPRDRVRGHLRGYKVSWWKTKSMLDGKRHHPEKHFLTFVGDRNYGMIPGLDP
FSEFRLTVLAYNSRGDGPESAPVVFETPEGVPEQPRFLKILNFDKDSVTLSWGLPKRANG
HITGYILQYQIINETHEIGPLMDISVANHTTLSWRLTDLSPSTKYKFYVKACTAKGCGKP
VTEEGLTVAQGSKGIGKNSEAVNPTQKFHPIEALEPGTEYTVRLVTKNWVDNNSIFEDVI
ETRGRAYAGIYDGISTQGWFIGLMCAIALLTLMLLTICFVRRNKGGKYSVKEKEDLHPDP
EAQSIKDEIFGEYSDSDEKPLKGSLRSVNGDIKATESADSLVDYGEGEHGMFNEDGSFIG
AYSGSKEKGSVEGNGSSTATFPLHA
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atggagatgctattaagcacaaagaggatcaccatatgcctgtttttctttgtactgagt
ttggcagctgctattgaaataccgttatcagttccacagcttccaacaatcaaggagcaa
tctgaaacccaggttgcctacccttttgatgagaactttacaattaaatgtgaagccagt
ggaaacccacagcccactttcaactggacaaaggatggaaaaccatttgatctgtcatct
gatcccagaataatcacacgtaacaactctgggacatttgtgattcagaaccatggaatc
atcaccaattttcaagggaaataccgttgctatgcatccaatgtgctgggaactgccatg
tcaaaagaaattgaactcattgttccaaatgtaccaaaattccctaaagaaaaaattgag
ccccttgacgtggagcatggtgattctgtgatcttgcactgtaaccccccaaaagggatc
ccacctttgcatatctattggatgaatattgatttgcagcacattcctcaagatgaaagg
gtctccatgagccttaagggagatctctactttgcaaacgtggaagaaaatgacagccga
agtgattactgttgcttcgcagcatttccaaaactgaggacaattgtacagaaaatgcca
atgacactgaaggtttcccgctttaagcatgctaatgactcaggctcacctaatgctgca
gttactaaggcaaattttattaaagaaagaaaacccaaactgctgatccctcctgaatct
gctggcagcagctcatcagtcactgttatcaagggaggtgtcctgcaactcgagtgtatt
gctgaagggctcccaactcctcatctaagctgggtcaaagttactgaaaacttgcccaag
gacaaacctgtaacagataaatttgggaaggtactgaagatagagaacgtgtctgcagct
gatgaaggaacctaccagtgcatggcaagcaaccctgtgggcagagcaaaacatgaattc
catgttcatgtagaagagcctcctcggtggattaaggagcccagaggtggtgtttacagc
ttaggagagaatcttttgctgctttgtgaggccattggcaacccagagccaaccattcag
tggaaacttaacgggatgcccattgatagtaggaccttcagagggcgagtctctgatggg
gagctcagccttaccaaccttcagcttcaggacactgctgtgtaccactgtgaggccagt
aataagcatggtaccctccttgctagtgccaacgtgaatgtcctcaatattgctccctta
atcctgacttcagatggtgaaaactatgctgcagttgttggttacagtgccttcctgcac
tgtgaaatttttgcctcacctgcagcagatgttagatggactaaggatgatagcatagag
ccactctcagcgctacgctatgaattaaataaaaatggcaccctagaaatcaaagaaaca
aagaaggaagatgcgggatcatacgcttgttgggttgcaaattctgttggaaaaagagca
atcacagcaaatctggatataagagatgctacaaaaattgtcattactccaaagaacccc
caagtgttgaaatcacattcaattttattgaaatgtcagtctgagtatgattcacacttg
aaaaacagcttcaaattatcctggaggaaagatggatatgagctgtcagtcagcagcata
caagacagcaggataattatggacatggacacgctgttcatatcaaatgtgatgccggag
gatcaaggcatttacacgtgtgtggctagcacttctcttgacagtgtcactgccaaaacg
cggttaattgttcttgatgttcctgacccaccggaagacctgcagctctcagaacatcaa
aaccgaagtgttcgactgtcttggaaagctggggccagccacaacagccctgttaatgag
tcgattatagagtttgaagagagccggtgggagccggggaggtggcaggagctggcccga
gccccagggaacaccaccaccaccctcctgtccctggccccatacaccaattaccagttc
cgtgtcgtgtctgtgaatgctgtcggaaggagccagcccagtaaaccatcgctgcgctac
ctaacacctccggctgctccagacaagaacccagaaaacatccgagttgaagcttctgaa
ccaaatgaaatggtgatgaaatgggagccactgaagtccatggagcgaaacgggccgggg
ctggagtacaaagtcagctggaggcagcggggtgttgagactgaatggaatgaagaaaca
gtgaagaagcactccctgaccctgaggaacacccccactttcgtgccctacgagatcaag
gtccaagcaataaataatttaggagctgggcctgagccaaatattaccactggatattcg
ggagaggacattccagatgccgctccttccggcgtctcggtggatattgtcaacagcacg
ctggtcaaagtcttctggtttggaataccaagggacagagttcgtggacatttaagaggc
tataaggtcagttggtggaaaacaaaaagcatgctggatggaaaaaggcatcatccggag
aaacacttcctgacgtttgtaggagacagaaactacgggatgatccctggcctggatccc
ttcagcgagttccgcttgactgtgctggcatacaactccaggggtgatggaccagaaagt
gctcctgtggtgtttgaaactccggaaggagtccctgaacagccccgttttctgaagatc
ctgaactttgacaaggactctgtcaccctgtcgtggggacttcccaagagagccaatggc
cacattactggctacattttgcaataccagataataaacgaaacacacgagattgggcct
ctgatggacatcagcgtggccaaccacaccacgctgagctggaggctcactgacctcagc
cccagcaccaagtacaagttctacgtcaaggcctgcacagccaaaggctgtgggaagcca
gtgacagaagaagggctgacagtggctcaagggagtaaagggatcggcaagaattcagaa
gcagtaaaccccacccaaaagtttcaccccattgaggcacttgagcctggaactgaatat
acagttcgtctagtgactaagaattgggttgataacaatagcatttttgaagatgtaatt
gagacgagggggagagcctacgcaggcatttacgatgggatttccacccagggctggttt
atcggactgatgtgtgccattgccttgctcactctgatgctgctaactatttgctttgtc
agaagaaataaaggaggaaaatactcagtgaaagaaaaagaagatttgcatccagaccct
gaagctcaatcaataaaagatgaaatctttggggaatatagtgacagcgatgaaaagccg
ctgaaaggcagcctgcggtccgttaacggggacattaaagccaccgaaagtgctgatagt
ctggtagattatggagaaggggagcacgggatgttcaatgaagatggttcatttattgga
gcttattctggatctaaggaaaaaggatcagtcgaaggcaatgggagctctacagcaact
tttcctctccacgcataa
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