Lagopus muta (rock ptarmigan): 125698709
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Entry
125698709 CDS
T09141
Name
(RefSeq) guanylate-binding protein 1-like isoform X1
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
125698709
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Gene cluster
GFIT
Motif
Pfam:
GBP_C
GBP
AAA_14
MMR_HSR1
ARM_LRRK2
CAMSAP_CC1
Motif
Other DBs
NCBI-GeneID:
125698709
NCBI-ProteinID:
XP_048813351
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Position
11:complement(2315958..2318425)
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AA seq
619 aa
AA seq
DB search
MDAPMLPMPAPLCLVTNKDSVLSLDRRALAVLRSVTQPLVVVAIAGLYRTGKSYLMNQLA
QKRTGEQRGKPHAFGGASCGISDSSLPTGFPLGPTVHAETKGIWMWCLPHPRRQGVTLVL
LDTEGLGDPKKDDDDSDAWIFTLAVLLSSTLVYNSIGTIDQWALEQLRLVTELTEHIRVR
EENDNPTSNFVRVFPCFVWTVRDFTLQLRALSEDEYLDDILRLQTGDGKKAKERNELRSC
LRNFFPRRKLFTMERPAADADLQRLEELREDELQPGFRKQVDAFCRYIWEEAPVKVLLGG
HQVTGNVLAGLAEKYVAAITSGAVPCVESAVTALARAENSAAVEAAVAEYQRGMEHGLVL
PTASRSALVAVHRDCEQRAITLFLSRAFADHERQYHAELVGKLEAAKDEFCRRNEEASEQ
RCHAVLQELWRDVELRLQNGDYVAPGGAQLFKEDLNRVLEEYKRRPDKGVRAEAVLEVFL
REREGLAQVLKATEVQLELAERQREAAAAEAEAAQKAAEAWLEEQRRTMEEHKRQLEQQL
KEEQRAWLEEQRRLLEHHKKEIEALVQEGFKREAAAMQELITQLEEEKKNRERDTRISSA
LSILAAFLPGAAGKLFRPM
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggacgctccgatgctcccgatgccggctcccctctgcctggtgaccaacaaggacagc
gtgctgtccctcgaccgcagggcgctggcagtgctgcgcagtgtcacccagcccctggtg
gtggtggccatcgctgggctgtaccgcactgggaagtcctacctgatgaatcagctggcg
cagaaacgcactggtgagcagagggggaaaccccatgcgtttggaggggcatcttgtggg
atttctgacagctcactgcccacaggcttcccgctgggccccacggtgcatgcggagacc
aagggcatctggatgtggtgcctgccccacccgcgccggcagggagtgaccttggtgctg
ctggacaccgaggggttgggagaccccaaaaaggatgacgatgacagcgacgcctggatc
ttcacgctggcggtgttgctctccagcaccctggtgtacaacagcattggcaccattgac
cagtgggcactggagcagctgcggctggtaacggagctgacagagcacatccgtgtgcgg
gaggagaacgacaacccaacatccaactttgtccgcgtcttcccgtgcttcgtctggacc
gtgcgtgacttcacactgcagctgcgggccctgagtgaggatgagtacctggatgacata
ctgcgactgcagaccggggatgggaagaaggccaaggagcgcaatgagctgcggagctgc
ctgcgcaacttctttccccgccgcaagctgttcacgatggagcggccggcagctgatgcg
gatctgcagcggttggaggagctgcgggaggacgagctgcagccaggcttccggaagcag
gtggacgccttctgccggtacatctgggaggaggcgccggtgaaggtgttgctgggtggg
caccaggtgacgggcaacgtgctggcaggcctggcggagaaatacgtggcggccatcacc
agcggcgcggtgccctgcgtggagagcgcagtgacagcgctggcacgggccgagaacagt
gcagcagtggaggcggcggtggccgagtaccagcggggcatggagcacggcctggtgctg
cccacagcctcacgcagtgctctggtggccgtgcatcgggactgcgagcaacgcgccatc
accctcttcctgtcccgtgcctttgccgaccatgaacgccagtaccatgcagagctggtg
ggcaagctggaggcggccaaggacgagttctgccggcgcaacgaggaggcgtcggagcag
cggtgccatgcggtgctgcaggagctttggagggatgtggagctgcgcctgcagaatggg
gactacgtggcgcctggtggtgcacagctgttcaaggaggacctgaaccgcgtgctggag
gagtacaagcggcggcccgacaagggtgtcagggcggaggcggtgctggaggtgttcctg
cgggagcgcgaggggctggcacaggtgttgaaggccactgaggtgcagctggagctggcg
gagcggcagcgggaggcagcagcggccgaggcagaggcggcccagaaggcggcagaggca
tggctggaggagcagcggcgcaccatggaggagcacaaacgtcagctggagcaacagttg
aaggaggagcagcgtgcgtggctggaagagcagcggcgcttattggagcaccacaagaag
gagattgaagcactggtgcaggagggcttcaagcgtgaggcggcagccatgcaggagctg
atcacacagctggaggaggagaagaagaacagggagcgggacacccggattagctcagct
ctgagcattttggctgcattcctgcctggtgcggcaggaaaactttttaggcccatgtga
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