Lagopus muta (rock ptarmigan): 125698765
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Entry
125698765 CDS
T09141
Symbol
DCP1A
Name
(RefSeq) mRNA-decapping enzyme 1A isoform X1
KO
K12610
mRNA-decapping enzyme 1A [EC:3.-.-.-]
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125698765 (DCP1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmut03019
]
125698765 (DCP1A)
03036 Chromosome and associated proteins [BR:
lmut03036
]
125698765 (DCP1A)
Messenger RNA biogenesis [BR:
lmut03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125698765 (DCP1A)
mRNA degradation factors
5'-3' decay
Decapping complex
125698765 (DCP1A)
Chromosome and associated proteins [BR:
lmut03036
]
Eukaryotic type
Gene silencing
piRNA pathway
125698765 (DCP1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
125698765
NCBI-ProteinID:
XP_048813484
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All DBs
Position
11:complement(6931448..6964199)
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AA seq
582 aa
AA seq
DB search
MEAASRAGQEISLAALKQHDPYITSIADVTGQVALYSFSPKANEWEKTDIEGTLFVYKRS
ASPYHVFTIVNRLNMHNLVEPVNKDLEFQLHEPFLLYRNASLSIYSIWFYDKNDCHRIAK
LMAKVVEQEAQRSQQVSQDRKSPSRTNGCSENRPIDILEMLSKAKVEYERNQVSDLSVMS
SSGVQQHANATKPESAETSEQNTSLQVQDQPFQSRPKHLTLEELFGTSVPKEPPLPLYPN
PERMEKLQTDSSAREQQNLLLPFSFDQTAVIQPPQGKSESPNVKASANPLSQQECLTPML
IPPASVSQPDVSSYSVRLSPILNSSSTLDAAPAQMLPGLKQNNSLMQVMQQATKQITPLV
NQPSEVNHAPQNLMAGQSQLITPLTSANTGTVSNTSHTGVDLLQKLRLTPQHDQMQQQSI
TKTSLTPNISASIGQLATPESFKESHSKSSTLNSKKIPSLQAVQQNKEPEVFPQSKTLPK
VSQVAPPQFVTATTTVAPSILLSPSVFQQSATKPPEVENKANSSSPLTLGTTEIQTVPPT
VLSRSQLQEALIHLIKNDSRFLSTIHEVYLQVLTKNTDNIKL
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcgagcagagcggggcaggagatcagcttggcggccctcaagcagcacgat
ccgtacatcaccagtatcgccgacgtgaccgggcaggtcgcgctctacagcttcagcccg
aaggctaacgagtgggagaagactgacatagaaggtaccttgtttgtgtacaaaaggtct
gcttctccataccatgtttttacaatagtgaatcgactgaacatgcacaacttagttgaa
ccagtgaataaagacttggagtttcagcttcatgaaccttttcttctctacagaaatgct
agcttgtcaatttacagtatctggttttatgacaagaatgactgtcatcgaatagcaaaa
ctcatggctaaagtggtagaacaagaagctcagagatcgcaacaagtttctcaggacaga
aaaagtcccagcagaacaaatggctgcagtgagaacagacctattgacatcctggaaatg
ctcagtaaagccaaggttgaatatgagcgaaatcaagtcagtgatttgagtgtcatgtca
agttctggtgtgcaacaacatgcaaatgccacaaagccagaaagcgcagagacttctgaa
caaaacacttcattacaagtgcaagatcaaccatttcagtcaaggccaaagcatctgact
ttagaagaactctttgggacctctgtaccaaaggaaccgcctttacctctgtatcccaat
ccagagagaatggagaagttgcagactgactcctctgccagagagcaacaaaacttgctt
ttgcctttttcctttgaccagacagcagtaatacaaccaccacaagggaaatcggaaagt
ccgaacgttaaagctagtgccaatcctttgagtcaacaggaatgtttgacacctatgctt
atacctccagcctcggtttcccagcctgatgtttcaagctattcagttcgtttaagccct
atacttaattcatcctcaacattggatgctgctcctgctcaaatgcttcctggcctaaag
caaaacaacagtctaatgcaagttatgcagcaagctaccaagcagataaccccgctagtg
aatcagccttctgaagtgaaccatgctccacagaatttaatggctggccagagccagctt
ataacacccttgacatcagcaaatacaggaactgtttcaaacacatcccatacaggtgtt
gatcttctccagaaactcaggttgactccacagcatgaccaaatgcaacagcagtctatc
actaagacttccttaacaccaaacatctctgcctcgattggccaacttgcaacaccagaa
agcttcaaagaatcacacagtaaatcatcaaccttgaacagcaaaaaaatcccttccctg
caggctgtacaacaaaacaaagaaccagaagtatttccacagtccaagactttacctaaa
gtcagtcaggttgcacctccacagtttgttacagctacaactacagtagctccttcaatc
ctcttgtctcctagtgttttccagcagtcagctacaaaacctcctgaagtggaaaataaa
gccaattcttcatcacctttaacacttggaacaacagagattcagacagtacctcctact
gttctcagtaggtctcagcttcaggaagcactgatacatctaataaagaatgattcccgt
tttctcagcactattcatgaagtctacttgcaagtcctaaccaagaatacagacaacatt
aagctataa
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