Lagopus muta (rock ptarmigan): 125698880
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Entry
125698880 CDS
T09141
Symbol
CNTN3
Name
(RefSeq) contactin-3
KO
K06761
contactin 3
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lmut04515
]
125698880 (CNTN3)
Cell adhesion molecules [BR:
lmut04515
]
Immunoglobulin superfamily
Contactins
125698880 (CNTN3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
Ig_5
Sp38
Pur_ac_phosph_N
Tissue_fac
Egh16-like
Motif
Other DBs
NCBI-GeneID:
125698880
NCBI-ProteinID:
XP_048813760
LinkDB
All DBs
Position
11:complement(16828288..16953300)
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AA seq
927 aa
AA seq
DB search
MLLLWKQLFLVSLVGCLGDPESSRTKMRSTVSVREGQGVVLLCGTPPRAGELSFAWIFNE
YPSFVQEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSTVTNSQVLGSPTPLVLRTDGV
MGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPVPQINWRRTDGMPFPSKIKLRKSNGM
IEIPNFQQEDAGLYECITENSRGKNIARGRLTYYAKPHWIQMIKDTEIAVEDTLYWDCRA
SGKPKPSYRWLKNGDQLSVEGRIQIENGALTISNLNLTDSGRYQCIAENKHGVIHSSAEL
RVVASAPDFSRNPMKKMIQVQIGSTVDFECKPKASPKARCSWKKGGEQLHENERITLLKD
GGLRITNVTKVDAGSYTCVATNQFGTASGTTNLVVTEPTRITLAPSNMDVTVGESVILPC
QVQHDPILDISFTWYFNGTLTDFKKDASHFEKVGGSASGDLMIRNIQLKHSGKYVCMVKT
EVDSVASAADLIVRGSPGPPEHVRVDEVTDTTAQISWQEGTDNHSPVTAYTVQARTPFSV
GWQRVTTVPDVIDGNTFTTTVVDLNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPE
IPPAEVSGGGGSRSELVITWDPIPEELQNGEGFGYVVAFRPFGTTTWIQTVVTSPDTPRY
VFRNESILPFSPYEVKVGVYNNKGEGPFSSITTVFSAEEEPTVAPTGVSVTSLSSSVIEV
SWNAIPWKMSSGRLLGYEVRYWNNGGKEESSNRVKAAGNETSIRITGLKSNLAYYTAVRA
YNSAGAGPFSATVNATTKKTPPSQPPGNVVWNVTDSRVILNWEEVRAMENESEVTGYKVL
YRTSSQNNMNVLNTDKTTAELLLQFNEDYIIEVKATTEGGDGTSSDQILIPRLASMDARG
SGPSTLNIYSLSGILSTVFSFTLNSVL
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgctgtggaaacagctgttcctggtatcactcgttggctgtcttggagaccct
gagagctcacggacgaagatgagaagcactgtatccgtgcgagaagggcagggagtggtg
ctgctctgcggaacgccgccccgtgccggagagttgtcatttgcttggatcttcaacgag
tatccatcgtttgtccaagaggacagccggcgatttgtgtctcaggagaccggccacctc
tacatcgccaaagtggagccttcagatgtgggaaattacacctgtgtcgtgaccagcact
gtgacaaacagccaggtccttgggtcaccaactcctctcgtgctgcgcactgatggtgtg
atgggagaatatgaacccaaaatagaagttcagtttcctgagacgcttcctgcagcgaaa
ggctcaactgtgaaactggaatgctttgcactaggaaaccctgtgcctcagattaattgg
agaagaactgatggtatgccatttccaagcaaaataaagctaaggaaatccaatggcatg
attgaaatacctaatttccagcaggaggatgcaggactgtatgaatgtattactgaaaac
tcaagaggaaaaaacattgcaagaggtcgtctcacttactatgcaaaaccacactggatc
cagatgataaaagatactgaaattgccgtggaggataccttgtactgggattgcagagca
agtggcaagccgaaaccatcatataggtggctgaagaatggagaccagctgtcagtagag
ggaaggatccagattgaaaatggtgcacttacaatatcgaatctaaatctgacagattct
ggcagataccagtgcatagctgaaaataaacatggtgtcatccattcgagtgcggagctc
agggttgtagcttctgctccagatttttccaggaacccaatgaagaaaatgattcaggtt
cagattggcagcacagttgactttgaatgcaaaccaaaagcttcccccaaggccaggtgt
tcctggaagaagggaggtgagcagctacacgaaaatgaaagaatcacattattaaaggat
ggaggactaagaataaccaatgtgaccaaagttgatgctggaagctacacttgtgtggca
acaaaccagtttggaacagccagtgggacgacaaacttagtagttacagagccaacaagg
atcactttggcaccttcaaacatggatgtcactgttggagaaagcgtcatcttgccttgc
caggttcagcacgatcctatactggacatcagcttcacgtggtatttcaatgggacactc
accgacttcaaaaaagatgcctctcattttgagaaggttggagggagtgcatcaggagat
ttgatgattagaaacatccagctgaaacacagtggaaaatacgtttgcatggtgaagaca
gaagtagacagtgtggcatctgcagctgaccttatagtacgaggctcacctgggccccct
gaacacgtgagggtggatgaagtaactgatactacagctcagatctcctggcaggaaggc
acagacaatcacagcccagtgactgcttacactgtacaagcaagaacacctttttcagtt
ggctggcagcgagttaccacagttccagatgtgattgatggaaatacattcacaaccaca
gtggtggatttaaatccttgggtggaatatgaatttcgtgtagttgccagtaacaaaata
ggaggtggagaacctagtttaccctcagaaaaagtaagaactgaagaggcagttcctgaa
attcccccagctgaagtcagtgggggaggcggcagcaggtctgaactggtcataacatgg
gatcccatccctgaggagttgcaaaatggagaaggatttggatacgtcgtcgcttttcgc
ccctttggcaccacaacgtggatacagactgtagtcacctctcctgacacgcccagatat
gtcttcaggaatgaaagcatcttgccattttcaccatatgaagtcaaagttggtgtctat
aacaataaaggagaagggccattcagttcaataaccactgttttttcagctgaagaagag
cctactgtagcccccactggtgtgtctgtgacaagcctgtcctcctctgtcatcgaagtc
tcctggaatgccattccctggaagatgagtagtggaagactactgggctatgaggtgagg
tactggaataatggaggaaaagaagaatcttcaaacagagttaaagctgcagggaatgaa
acttcaataagaataacaggtttgaagagcaacttagcatactacacagctgtccgtgcc
tacaacagtgctggagcaggtcccttcagtgccacagtgaatgctaccacaaagaagaca
ccacccagtcagccaccaggaaatgttgtgtggaacgttactgactccagagtcatcctc
aactgggaagaagtaagagccatggagaatgagtctgaggtgactgggtataaggttctg
tacaggacaagcagtcagaacaatatgaatgtgctgaacacagacaaaacaacagctgaa
cttctgctccagtttaatgaagattacattatagaagtaaaagcaacaactgaaggtgga
gatggcactagcagtgatcagatcctgattcccagactagctagtatggatgcaagaggc
tctggtccatcaaccttgaacatctacagtctatctggcattttatcgacagtgttttcc
ttcactcttaattcagtgttgtga
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