Lagopus muta (rock ptarmigan): 125699065
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Entry
125699065 CDS
T09141
Symbol
NUP93
Name
(RefSeq) nuclear pore complex protein Nup93 isoform X1
KO
K14309
nuclear pore complex protein Nup93
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125699065 (NUP93)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmut03019
]
125699065 (NUP93)
Messenger RNA biogenesis [BR:
lmut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125699065 (NUP93)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
125699065
NCBI-ProteinID:
XP_048814134
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Position
12:complement(18566672..18635942)
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AA seq
819 aa
AA seq
DB search
MDTEGFGELLQQAEQLAAETEGISELPHMERNLQEIQQAGERLRSRTLTRTSQETADVKA
SVLLGSRGLDISHISQRLESLSAATTFEPLEPVKDTDIQGFLKNEKDNALLSAIEESRKR
TFAMAEEYHRESMLVEWEQVKQRILHTLLASGDDALDFTQENEPSYVGESGPPGRSSLDS
VEMAYARQIYIYNEKIVNRHLQPNLVDLCAAVAELDDKNISEMWAMVKQMTSVRLVSASD
VLNVRTNLEVRMEFVRQALRYLEQSYKNYTFVTVFGNLHQAQLGGVPGTYQLVRSYLNIK
LPAPVPGLQDGEVEGHPVWALIYYCMRCGDLTAAMHVVKRAQHQLGEFKTWFQEYMNSKE
RRLSIATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDITDNQSEVADTTEDYLWLKLNQ
VCFDDDGASSSQDRLTLSQFQKQLLEDYGESHFAVNQQPFLYFQVLFLTAQFEAAIAFLF
RTERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEVGDPPGVRRLNFVRLLMLYTRKFE
STDPREALQYFCFLRNEKDSQGENMFLRCVSELVIESREFDMILGKLENDGSRKPGVIDK
FNSDTKPIINKVASAAENKGLFEEAAKLYDLAKNPDKVLELMNKLLSPVVPQISTPQSNK
ERLKNMAHSIAERYKAQGISAKKSIDSTFYLLLDLITFFDEYHAGHIDRAFDIIERLKLV
PLSQDCVEERVAAFRNFSDEIRHNLSEVLLATMNILFTQYKRMKGTSPATPARPQRVIED
RDSQLRSQARALITFAGMIPYRTSGDTNARLVQMEVLMN
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggacacggaaggctttggagagctgctccagcaggcagaacagcttgcggctgagact
gagggcatctctgagctccctcatatggaacgcaacctgcaggagatccagcaggctggg
gagcgcctgcgttcccgcaccctgacccgcacctcccaggagactgcagatgtgaaggcg
tctgttcttcttgggtccagagggctcgatatatctcatatctctcagcggttagagagt
ctaagtgcagccactacatttgagcctcttgaacctgtgaaagacactgacatccaggga
ttcctgaagaatgagaaggacaatgcattgctgtcagccattgaagagtctaggaagagg
acttttgctatggcagaagagtatcaccgagagtcaatgctggttgaatgggagcaggta
aaacagaggattcttcatactctgcttgcatctggagatgatgctctcgatttcacccag
gaaaatgagcccagctatgtcggtgagtcgggccctccaggccgcagctctctggacagc
gtggagatggcatacgcacgtcagatttatatttataatgagaagatagtgaacagacat
ctgcagcctaacctggtggacctttgtgctgctgttgcagaactggatgataagaacatc
tctgagatgtgggccatggtgaaacaaatgaccagcgttcgcctggtttctgctagcgac
gtcctgaacgtgcggaccaacctggaggtgcgcatggagtttgtgaggcaggcgctgcgc
tacctcgagcaaagttacaaaaattacacctttgtgacagtctttggaaacctgcaccag
gctcagctgggaggagttccaggcacttatcaactggtccgcagttacttgaacatcaag
ctgcctgcacctgtccctggactccaggatggtgaggtggaaggccatcccgtctgggca
ctgatttactactgcatgcgctgcggagatctgactgcagccatgcatgtggtgaaacgg
gcacagcaccagctgggagagtttaaaacctggtttcaggagtacatgaacagcaaagag
agaaggttatccattgccacagaaaataagcttcgtctccattacagacgggctctgagg
aacaacactgacccatacaagagggctgtttattgcatcattggccgctgtgacattaca
gataaccagagtgaagttgctgacacgacagaggattacctttggctgaagctgaaccag
gtgtgtttcgatgacgacggtgccagctcttcacaagaccgattgacattgtcacagttc
cagaagcagctgctggaggactatggtgaatcccactttgcagtgaaccagcagcctttc
ctctacttccaagtattgttcttgacagcacagtttgaagctgcgattgctttcctgttc
cggacggagcgcctgcgttgtcatgctgttcatgttgctttggtcctgtttgagttgaaa
ttgctcctgaaatcttctgggcagagcgcacagttattaagccatgaggttggtgacccc
cctggcgtgaggcgtctgaacttcgtgcggcttttgatgctctacacccgtaaattcgag
tccacggatccaagagaggctctgcagtacttctgctttctcaggaacgagaaggacagc
caaggagagaacatgttcttgcgctgtgttagtgaattagtaattgaaagcagagagttt
gatatgattcttgggaagctggagaacgatggcagtcggaagcctggagtgatagacaag
tttaatagtgacacaaaacctattattaacaaagtggcttctgcagcagaaaataaagga
ttgtttgaagaagcagcaaaactatatgaccttgcaaagaaccctgacaaagtcctggag
ctgatgaacaaactcctcagtcccgttgtgccccagatcagcacgccccagtccaacaag
gagcggctgaagaacatggcccattccattgctgagaggtacaaagctcaggggatcagt
gcaaagaaatccatcgactccacgttctaccttctgctagacttaatcacgttttttgat
gagtatcacgccggtcacattgacagggcctttgatatcatcgagcgcctgaagcttgta
cctcttagccaggattgcgtggaggagagagttgctgccttcaggaatttcagtgatgaa
atcaggcacaatctatctgaggtactgcttgcaaccatgaatattttattcacccagtac
aagcggatgaaaggcacgagtcctgccactcctgccaggccccagcgggtgatagaggac
agagattcgcaactgcgatctcaagctcgtgcgctgatcacatttgctggaatgatccct
tacagaacatctggagacacgaatgcaagactggtgcagatggaggtccttatgaactag
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