Lagopus muta (rock ptarmigan): 125699128
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Entry
125699128 CDS
T09141
Symbol
CTCF
Name
(RefSeq) transcriptional repressor CTCF
KO
K23195
transcriptional repressor CTCF
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lmut03000
]
125699128 (CTCF)
03036 Chromosome and associated proteins [BR:
lmut03036
]
125699128 (CTCF)
Transcription factors [BR:
lmut03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
125699128 (CTCF)
Chromosome and associated proteins [BR:
lmut03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
125699128 (CTCF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
zf-C2H2_ZN142
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
zf-met
zf-C2HE
zf-C2H2_6
Zf-C2H2_ZNF451
zf-C2H2_15
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
125699128
NCBI-ProteinID:
XP_048814286
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All DBs
Position
12:17624927..17654743
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AA seq
728 aa
AA seq
DB search
MEGEAVEAIVEESETFIKGKERKTYQRRREGGQEDEACHIAPNQADGGEVVQDVNSGVQM
VMMEQLDPTLLQMKTEVMEGAVPQETEATVDDTQIITLQVVNMEEQPINLGELQLVQVPV
PVTVPVATTSVEELQGAYENEVSKGGLQEGEPMICHTLPLPEGFQVVKVGANGEVETLEQ
GELQPQEDPNWQKDPDYQPPAKKTKKNKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSEV
NAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCG
RAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYAS
VEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSG
TMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERY
ALIQHQKSHKNEKRFKCDQCDYACRQERHMVMHKRTHTGEKPYACSHCDKTFRQKQLLDM
HFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCSGLDGGEGENGGETKKGKRGRKR
KMRSKKEDSSDSEENAEPDLDDNEDEEETAVEIEAEPEVEPEAPAPPPSKKRRGRPPGKA
ATQTKQSQPAAIIQVEDQNTGEIENIIVEVKKEPDAETVEEEEEAQPAVVEAPNGDLTPE
MILSMMDR
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgaagcagtcgaagccattgtggaggaatcagaaacttttatcaaggggaaa
gagcgcaaaacctatcagagacgccgcgagggagggcaggaggacgaggcttgtcacata
gctcccaaccaggcagacggaggggaggtggtgcaggatgtcaacagcggcgtgcagatg
gtgatgatggagcagctggatccaactcttcttcagatgaagactgaagtaatggaaggt
gccgtgcctcaggaaacggaggctacggtggatgacacgcagatcataacgcttcaggtt
gttaatatggaagagcagcctataaaccttggtgagcttcagctggtccaagtacccgtt
ccagtgactgtacccgttgccaccacatctgtggaagaacttcagggagcttatgaaaac
gaggtttccaaaggaggcctgcaggagggagagcccatgatctgtcacaccctgccttta
ccagaaggcttccaggtcgtgaaggtgggtgctaatggagaggtggagacactggaacaa
ggggaacttcagccacaagaagatcccaattggcaaaaagatccagactatcagccacca
gccaaaaaaacaaagaaaaacaagaagagtaagcttcgctacaccgaggagggcaaggat
gtggatgtctctgtgtatgacttcgaggaggagcagcaggagggcttattgtctgaggtc
aatgcagagaaggtggtgggcaacatgaagccacctaaaccaacaaaaattaaaaagaaa
ggtgtaaagaagacattccagtgtgaactgtgcagttacacttgtccacgccgttccaac
ttggaccgccacatgaaaagccacactgatgaaagaccacacaagtgccacctctgtggc
agggcatttcggacagtcacgttactgaggaaccacctcaacactcacacaggtactcgc
cctcacaagtgcccagactgtgacatggcctttgtgaccagcggggagttggtgcggcac
cgccgttacaaacacacccacgagaagcccttcaaatgctccatgtgtgactatgccagt
gtggaggttagcaaattgaaacgccacattcgttctcacactggagagcgtccgttccag
tgcagcttgtgcagctatgccagcagggatacctacaaactgaagaggcacatgaggacc
cactctggagagaagccatatgaatgttacatctgccatgctcgcttcactcaaagtggt
accatgaagatgcacattctgcagaagcacacggagaacgtggccaaatttcactgtcct
cactgtgatactgtgatagcgagaaagagtgacttgggtgttcatttgcgaaagcagcat
tcctacattgaacagggcaagaagtgtcgctactgcgacgctgtgttccacgagcgctat
gccctcatccagcatcaaaagtctcacaagaacgagaagcgcttcaagtgtgaccagtgt
gattatgcgtgcaggcaggagcggcacatggtcatgcacaaacggacccatactggagaa
aagccttatgcctgtagccattgtgataaaaccttccgtcagaaacagctccttgatatg
cacttcaaacgataccacgaccccaacttcgtccctgctgcctttgtctgttccaagtgt
ggtaaaacattcactcgcaggaacacaatggccagacatgctgataactgttctggccta
gatggtggggaaggagagaatggaggagagacaaagaagggcaaacgtggccgaaagagg
aagatgcgctctaagaaagaagattcctctgatagtgaggaaaacgctgaaccagatttg
gatgataacgaagacgaagaggagacagcagtagaaattgaggctgaaccagaagttgag
ccggaggctcctgcaccacctcccagtaagaagaggagagggaggccaccaggcaaagct
gccacccaaacaaaacaatcccagcctgcagcaatcattcaggttgaagaccagaacact
ggtgaaatcgaaaacatcatagttgaagtaaagaaagaacctgatgcagaaacagtagag
gaagaggaggaagctcagcctgctgtagtggaagctccaaacggagacctcactcctgag
atgattctcagcatgatggaccggtga
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