Lagopus muta (rock ptarmigan): 125699253
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Entry
125699253 CDS
T09141
Symbol
VPS35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125699253 (VPS35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmut04131
]
125699253 (VPS35)
Membrane trafficking [BR:
lmut04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
125699253 (VPS35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
FerA
KH_GLD-3_1st
Motif
Other DBs
NCBI-GeneID:
125699253
NCBI-ProteinID:
XP_048814572
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Position
12:complement(12001475..12022303)
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AA seq
796 aa
AA seq
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MPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNKLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVK
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEQADEETTGDISDSM
DFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQ
IVLPGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIII
ALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
CYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLRLKH
FHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQEQVDAIMNLVSTLIQDQPDQPAEDPD
PEDFADEQSLVGRFIHLLRSDDPDQQYKILNTARKHFGAGGNQRIRFTLPPLVFAAYQLA
FRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHE
TVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKL
LKKPDQCRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLF
IEILNRYIYFYEKENEAVTIQVLNQLIQKIREDLPNLESTEETEQINKHFHNTLEHLRLR
RESPESEGPIYEGLVL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgccaacaacacagcaatctccccaggatgaacaggaaaaactcctggatgaagccatt
caggctgtgaaggtgcagtctttccaaatgaagagatgcttggacaaaaacaagctcatg
gatgctttgaaacacgcgtccaacaagcttggtgagctgcggacttctatgttgtctcct
aagagctattatgagctctacatggcaatttctgatgagctacactacttggaagtctac
ctgacagatgaatttgccaaaggaaggaaagtggcagacctttatgagctagtacagtat
gctggaaatattattccaagactgtatctcctaataacagtaggtgttgtatatgtcaag
tcatttccacagtccaggaaagatattttgaaagacctggtggagatgtgccgtggagta
cagcatcctcttagaggcctctttcttcgcaactatctcctgcagtgtaccaggaacatc
ttaccagatgaaggcgagcaagcagatgaagaaaccactggagacatcagtgattctatg
gactttgtgctgctgaactttgctgagatgaacaaactttgggtgcgaatgcaacaccag
ggccacagtagggacagagaaaagagagagcgggaaaggcaggaactgagaattctggta
ggaaccaaccttgttcgcctcagtcagctggaaggtgttaatgtggaacgatacaagcag
attgttctgcctggaatattggagcaggttgtaaactgtagagatgctttagctcaggag
tacctcatggagtgtatcatacaggttttcccagatgaatttcatctccaaaccttgaac
ccatttctcagagcttgtgctgagctgcaccaaaatgttaatgtgaaaaatataataatt
gctttaattgacaggttagctttatttgcgcatcgtgaagatggacctggtatcccagca
gatatcaaactgtttgacatcttttcacagcaggttgctactgttatacagtctcgtcaa
gacatgccctcagaggatgtggtatccttgcaagtttctctcattaacttagctatgaag
tgctacccagaccgtgttgactatgttgataaggtgttggagacaactgtagaaatattc
aataaacttaatctggaacatattgcaacaagtagtgctgtttcaaaggagctgaccaga
cttctgaaaatccctgttgatacttacaacaatatcctgacagttttgagactaaaacat
ttccaccccctgtttgagtactttgattacgagtccaggaagagcatgagttgttatgtg
cttagcaacgtgttggattataacacagaaattgtgtcccaagaacaggttgatgctatc
atgaatttggtatccacgctgatccaggatcagccagatcaacctgctgaagaccctgac
cccgaggactttgctgatgagcagagtcttgttggaagatttattcatcttctgcgttca
gatgaccctgaccaacagtataagatcttaaacactgctcgaaaacactttggtgcaggt
gggaaccaacgtattcgttttacgctgccaccgttggtttttgcagcgtaccagcttgct
tttcgctacaaggaaaactcaaaagtggatgacaagtgggagaagaagtgccagaaaatc
ttctcatttgctcatcagaccatcagtgctttgatcaaagcagagctggcagagctgcct
cttcgtctctttctacaaggggcgctggctgcaggggagattggctttgagaatcatgaa
actgtggcctatgaatttatgtcccaggctttctctctgtatgaagatgaaatcagtgat
tcaaaggcacagctggctgcaatcacgttgataattgggacgtttgagaggatgaagtgc
ttcagtgaggagaaccatgagccgctgaggactcagtgtgcgttggcagcctctaagctc
cttaagaaaccagaccagtgccgggctgtgagtacttgtgctcatctgttctggtctggc
cgaaacactgacaagaatggagaggagcttcatggaggaaagagagtgatggagtgcctg
aagaaggctttaaaaatagcgaatcagtgcatggacccttctctgcaagtccaacttttc
atagaaattctcaatagatacatctatttttacgaaaaggaaaatgaggcagtgacaatt
caagttttgaatcaactcatacaaaagataagagaagatcttccaaacctcgaatctact
gaagaaacagaacaaattaacaaacactttcacaacacactggagcacttgcgtctgagg
agggaatcaccagaatctgaggggccaatttatgaaggtcttgttctttaa
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