Lagopus muta (rock ptarmigan): 125699257
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Entry
125699257 CDS
T09141
Symbol
VPS4A
Name
(RefSeq) vacuolar protein sorting-associated protein 4A
KO
K12196
vacuolar protein-sorting-associated protein 4
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03250
Viral life cycle - HIV-1
lmut03272
Virion - Hepatitis viruses
lmut04144
Endocytosis
lmut04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
125699257 (VPS4A)
03272 Virion - Hepatitis viruses
125699257 (VPS4A)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125699257 (VPS4A)
09143 Cell growth and death
04217 Necroptosis
125699257 (VPS4A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmut04131
]
125699257 (VPS4A)
03400 DNA repair and recombination proteins [BR:
lmut03400
]
125699257 (VPS4A)
Membrane trafficking [BR:
lmut04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
125699257 (VPS4A)
DNA repair and recombination proteins [BR:
lmut03400
]
Eukaryotic type
Check point factors
Other check point factors
125699257 (VPS4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Vps4_C
MIT
AAA_lid_3
TIP49
AAA_16
AAA_22
AAA_14
AAA_5
RuvB_N
IstB_IS21
AAA_25
AAA_17
DUF815
AAA_2
NPHP3_N
AAA_18
AAA_33
RNA_helicase
nSTAND3
AAA_24
PhoH
ResIII
AAA_7
Mg_chelatase
AAA_28
NACHT
YCII
Parvo_NS1
bpMoxR
YhdB
AAA_30
TPR_IF140_C
Motif
Other DBs
NCBI-GeneID:
125699257
NCBI-ProteinID:
XP_048814586
LinkDB
All DBs
Position
12:complement(1017173..1020399)
Genome browser
AA seq
437 aa
AA seq
DB search
MTTTTLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAKC
VQYLDRAEKLKEYLRSKEKQGKKPVKEAQNDAKGSDSDSEGENPEKKKLQEQLMGAIMME
KPNVRWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAV
ATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNENE
SEAARRIKTEFLVQMQGVGNSSDGILVLGATNIPWVLDSAIRRRFEKRIYIPLPEEAARA
QMFKLHLGNTPHSLTDADIHELARKTDGYSGADISIIVRDALMQPVRKVQSATHFKKVRG
PSRTNPNLLVDDLLMPCSPGDPGATEMTWMEVPSDKLMEPIVCMSDMLRSLATTRPTVNT
EDLLKVKKFTEDFGQEG
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgaccaccctgcagaaagccatcgacctggtgaccaaagccaccgaggaggac
aaggccaagaactacgaggaggcgctgcggctgtaccagcacgccgtggagtacttcctg
cacgccatcaaatatgaggcgcacagcgacaaagccaaggagagcatccgtgccaagtgc
gtgcagtacctggaccgggccgagaagctgaaggagtacctgcgcagcaaggagaagcag
ggcaagaagcccgtcaaggaggcacagaatgacgccaaggggagcgacagcgacagcgag
ggcgagaacccggagaagaagaaactgcaggagcagctgatgggtgccatcatgatggag
aagcccaatgtgcggtggagcgacgtggctggcctggagggagccaaggaggccctgaag
gaagccgtgatcctgcccatcaagttcccacatttgtttactgggaagcgcacgccctgg
cgagggatcctgctcttcgggcctcctggcactgggaagtcctacttggccaaggctgtg
gccactgaggccaacaactccactttcttctccgtgtcgtcctcggacctgatgtcaaag
tggctgggagagagtgagaagctagtgaagaacctctttgagctggcaaggcagcacaag
ccctccatcatcttcatcgatgaggtggactcactgtgcggctcccgcaatgagaatgag
agtgaggcagcccggcgcatcaagacagagttcctggtgcagatgcagggtgtgggcaac
agtagtgatgggatcctggtgctcggtgccaccaacatcccctgggtgctggactcggcc
atcaggaggaggttcgagaagcgcatttacatcccattacctgaggaggcagcccgggcc
cagatgttcaaactgcacctgggcaacaccccacactctctgacggatgctgacatccac
gagctggcacggaagacagatggctactctggggccgatatcagcatcattgtgcgggat
gccctgatgcagcctgtccgcaaggtgcagtcagctacgcacttcaagaaggtccgcggt
ccctcccgcaccaaccccaaccttctggtggatgacctcctgatgccgtgctcgcctggg
gacccgggtgccaccgagatgacctggatggaggtgcccagtgacaagctgatggagccc
attgtctgcatgtcggacatgctgcgttctctggccaccacccgtcccaccgtgaacacc
gaggacctcctgaaggtgaagaagttcacagaggactttgggcaggaaggttaa
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