Lagopus muta (rock ptarmigan): 125699269
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Entry
125699269 CDS
T09141
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125699269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmut03021
]
125699269
03036 Chromosome and associated proteins [BR:
lmut03036
]
125699269
Transcription machinery [BR:
lmut03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
125699269
Coactivators
SAGA/TFTC/STAGA complex
125699269
Chromosome and associated proteins [BR:
lmut03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
125699269
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
125699269
NCBI-ProteinID:
XP_048814604
LinkDB
All DBs
Position
12:9002543..9135099
Genome browser
AA seq
1025 aa
AA seq
DB search
MAAGASDPLEEMLLFSEEVDEKAVSDLVGSLESQLAGGRGSAEAPQPRTSALSQPQQPQQ
PQQQQQQRQGSLAGGGSPVRQQQGHPAPPPATGVEEAAAGRPGAAESRAPAPGPLPSPSP
PAAATAVAAAAAAGRGVSVNSSSVQQSHGAALLGGSPAAPAPPQPAAPPPAPPVNNHVAA
GAGSRDAGSPSPGRSPPAVETPPRDEAVEGSGAKGGGRAATEGADAAEPAPLPGEAAPNG
EGAGGRAAAVPPVSGQQSPAGREGGAAQPKPAHGPQPAVNALGNSASPAPAATPPGPGSA
AKPAGVAKAGAALPAASQALSPRPALGAAPRLVAPQLIVRPPQQTTIQLPPGFTIPPGMV
LVRTDAGQLVMVPQQALAQAQMQAQVQTQGQGPASISPRLSVPTSGPVFRLTTTQQPTSV
ATSTVRLGLPVQAKVVQSTATPVSATAAATLPGGSILSHTTVSVGTTNAQNLFKTTVSTG
TPTSQQPAVITGGQTQSAAQNQSQPRLPLPPHTTAQVPAQPQVIPSSPVPGTTVVSQEMQ
ENVKKCKNFLATLIKLASHNSPSPETSRNVKALVQDLLDAKIDPEEFTGRLQSELKSSPQ
PYLVPFLKKSLPALRQSLLNSQHSVLQGQPSQQSLQQTKLSQVIPQSASGSISSIVTTQT
IGIRQPNNICTVSVSNTVQPPQVKVVQSNQSSQLQIIQSTSAQTVKRNPACQTTQIRMPV
VITQTIRPQGTVGKAPTIQASKSPGGFGVQVSANQKNKLNDPGGGSFRDDDDINDVASMA
GVNLNEESARIMATNSDLVGTQIQSCKDEPFLAAIPLHKRILEMAKKLGITDVPAEVVTF
ISHATQSRLRTVIEKVTVITQHRMESYKDDEWYEQATDVRSQLKFFEQLERLEKQRKDEQ
EREILLKAAKSRSRQEDPEQARLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKRKLD
SPGLLTIGGEGLSMSGGGQAGLGTPSSRQYARQKITRVNLRDFIFYMEQERETSRSLLLY
RALLK
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggcgcctcggatcccctggaagagatgctgctcttctccgaggaggtggac
gagaaggcggtcagcgacctggtgggctccctggaatcgcagctggccggcggccggggc
tcggccgaggcgccccagcccaggacctccgccctgtcccagccgcagcagccgcagcag
ccgcagcagcagcagcagcagcgccagggcagcctggcggggggcggcagccccgtccgg
cagcagcaggggcaccccgcgcccccccccgctaccggggtggaggaggctgcggcgggc
cgtcccggagccgcggagagccgagcccccgccccggggccgctcccgtccccgtctccc
ccggcggcagcgacggcggtagcggcggcggcggcggcggggcggggagtgagtgtaaac
agtagtagtgtgcagcaatcacatggagcggctctgctcggcggcagccccgccgccccg
gccccgccgcagcccgccgcgcccccgcccgccccgcctgtcaacaaccatgtggccgcc
ggcgccggctcccgggacgcgggcagccccagccccggccgcagcccgcccgccgtggag
acgccaccgcgcgacgaggccgtggaggggagcggggcgaagggcggcgggcgggctgcg
acggagggagccgacgccgccgagcccgcgccgctgcctggcgaggcggcgcccaacggg
gagggcgccgggggccgggcggcggcggtgccgccagtcagcggccagcagagcccggcc
ggcagggaaggcggtgcggcgcagcccaagcccgcgcacggccctcagcccgcagtaaac
gcacttggcaactctgccagccccgcgcccgccgccaccccgccgggaccgggctctgct
gccaaacccgcgggcgttgccaaggcgggcgctgccctccctgccgcttcgcaggcgctg
tcgccacggcccgcgctgggtgctgccccgaggctggtggccccgcagctgatcgtcagg
ccgccgcagcagaccaccatccagctgccgccgggcttcaccatcccgcccggcatggtc
ttggtgcgcacggatgctggacaacttgtgatggtacctcagcaggctctagcccaggca
cagatgcaggctcaagtgcagacccagggacaaggtcctgccagcatttcgcctcgactt
tcagtgcccacaagtggcccagtttttcgcctaacaacaactcagcaaccaacttctgta
gccacatctactgttcgccttggacttccagtgcaagccaaagttgttcagtcaactgca
acacctgttagtgctacagctgctgcaactctgccaggaggctctattctttcacatacc
acagtatcagtaggtacaacaaatgctcaaaatttgttcaagactacagtatcaacggga
acaccaacatctcaacagcctgcagtaattactggtggacaaactcaatctgcagcacaa
aaccagagtcagcctcggctcccacttccacctcatacaacagcacaagtgccagcacag
ccccaagtcataccaagctctcctgtacctggaactacagttgtatcacaggagatgcaa
gagaatgtgaaaaaatgcaaaaactttttagctactcttataaaacttgcttctcataat
tcaccttctccagaaacatcccgcaatgtgaaagctctggttcaggatttgttagatgca
aagattgatccagaagaatttacaggccgcctccaatcagaactcaaatcatctcctcag
ccatatcttgtacctttccttaagaaaagtctacctgcattgagacaatctttactgaat
agtcaacattcagttttgcaaggacagccgtctcagcagtcgcttcaacaaaccaagcta
tcacaagttatacctcaatctgcctctggaagtatttcctccattgtcacaacgcagaca
ataggaataaggcaaccaaacaacatttgcacagtctctgtatcaaatacagtgcagcct
cctcaggttaaggtggtacagtcaaatcagagttctcaactgcagattatccagtcaaca
tctgctcaaactgtgaaacgaaaccctgcttgccagactacccagattaggatgccagtg
gtaataactcagaccattagaccacaaggcacagtagggaaggcaccaacaatacaagcc
agcaaaagtcctgggggctttggtgttcaggtctctgcaaatcagaaaaacaagctgaat
gaccctggaggtggttctttcagagatgatgatgacatcaatgatgttgcctctatggct
ggtgttaatctaaatgaagaaagtgcccgaattatggctaccaactctgacttggttgga
actcagatacagtcgtgtaaagatgaaccctttcttgctgctatacctctacataaacgc
atacttgaaatggctaaaaaattaggaattactgatgtgccagctgaggtggttactttt
atttcccatgcaacacaaagcagattaagaacagtgatagaaaaagtaacagtgataacc
cagcaccgcatggaatcatacaaagatgatgaatggtatgaacaagctacagatgtccga
tcacaattgaagttttttgagcagttggaacgtttagaaaagcaaaggaaagatgaacaa
gagagggaaatcttgctaaaggctgccaagagtcgctcaaggcaagaggacccagagcaa
gctagactgaaacaaaaagcaaaggagatgcagcaacaagaacttgcacaaatgaggcag
agagatgccaatctaactgcattggcagctattggtccccggaagaaacggaaacttgat
tcacctggactgcttaccataggaggagagggcctcagtatgtccggtggaggtcaggct
ggcttggggactccttcatccaggcagtatgcacgacagaaaataacacgtgtaaacctc
agggacttcatcttctacatggaacaggaaagagaaacgagccgttctctcctgctctat
cgagctttgcttaaataa
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integrated database retrieval system
