Lagopus muta (rock ptarmigan): 125699326
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Entry
125699326 CDS
T09141
Symbol
CDH1
Name
(RefSeq) cadherin-1 isoform X1
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04371
Apelin signaling pathway
lmut04514
Cell adhesion molecules
lmut04520
Adherens junction
lmut05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
125699326 (CDH1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125699326 (CDH1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
125699326 (CDH1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
125699326 (CDH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lmut03036
]
125699326 (CDH1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lmut04515
]
125699326 (CDH1)
04090 CD molecules [BR:
lmut04090
]
125699326 (CDH1)
Chromosome and associated proteins [BR:
lmut03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
125699326 (CDH1)
Cell adhesion molecules [BR:
lmut04515
]
Cadherins
Major cadherins
125699326 (CDH1)
CD molecules [BR:
lmut04090
]
Proteins
125699326 (CDH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
He_PIG
TM_ErbB1
Filamin
Gram_pos_anchor
Motif
Other DBs
NCBI-GeneID:
125699326
NCBI-ProteinID:
XP_048814726
LinkDB
All DBs
Position
12:complement(1066906..1075597)
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AA seq
915 aa
AA seq
DB search
MGRRWGSTAPQRFPVLVLLLLLQVCGWRCDEAAPCQPGFAAETFTFSVPRDSVAAGKELG
RVSFAACGGQPWAMYVPADTRFKVNVDGVVSTKRPVTLHGREISFIIYARDATGQRHSAQ
VTVGRQRNHHHHSHYLQDTTPAVLSFPKHDSGFLRRQKRDWVIPPISCLENHRGPYPMRL
VQIKSNKDKESKVYYSITGQGADSPPVGIFVIERETGWLEVTEQLDREKIDRYTLFSHAV
SASGQPVEDPMEIIITVMDQNDNRPVFIKELFVGYIEENAKPGTSVMTVSATDADDAVNT
DNGIVSYSIISQQPPSPHPQMFTIDPAKGIISVLGTGLDRETTPNYTLIVQATDQEGKGL
SNTATAVIEVTDANDNIPIFDPTMYEGVVEENKPGIEVARLTVTDQDTPGSPAWQAVYHI
KSGDQDGAFSIITDPSTNNGILKTAKVGHLTVDGSSVGHVPTSPTATLTPLSNLQGLDYE
TKNRYDLVVTVENKVALSVPITLSTASVLVTVLDVNEPPVFVPPIKREVVSEDLPVGHEV
TSYTAQDPDRDVRQKITYRMGSDPAGWLTIDSENGIITAAQPLDRESVHAINSTYKAIIL
AVDNGIPDATGTGTLLLVLQDVNDNGPTPEPRSFEICNRQPEQQMLSIVDKDLPPHTYPF
NAALEHGSSNNWTVAIRGQDELALSLKKELEPGEYNIFLKLMDSQGKAQVTQVKAQVCEC
EGTAKNCERRSYIVGGLGVPAILGILGGILALLILLLLLLLFARRRKVEKEPLLPPEDDM
RDNVYNYDEEGGGEEDQDYDLSQLHRGLDARPEVIRNDVAPPLMAAPQYRPRPANPDEIG
NFIDENLKAADTDPTAPPYDSLLVFDYEGGGSEATSLSSLNSSASDQDQDYDYLNEWGNR
FKKLAELYGGGEDDD
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atggggcggcggtggggttccaccgccccgcagcgtttccccgtgttggtgctgctgctg
ctgctccaggtgtgcggctggcggtgtgatgaggcagccccctgccagcccggctttgct
gcagagaccttcaccttcagtgtgccccgggacagcgtggcggcgggcaaggagctggga
cgagtgagctttgcagcctgtggcggccagccatgggccatgtatgtcccggctgataca
cgcttcaaggtgaacgtggatggcgtcgtctcaacgaaacggccagtgacgctccatggg
agggagatcagcttcatcatctatgcacgggacgccacgggccagaggcactcagcccag
gtgaccgtgggcaggcagaggaaccaccaccaccacagccactacctgcaggacacgacg
ccagctgtgctgagcttccccaagcacgactccggcttcctccggaggcagaagagggat
tgggtcatcccccccatcagctgcctcgagaaccaccgtgggccctaccccatgaggctg
gtgcagatcaaatccaacaaggacaaggagtccaaggtgtactacagcatcacggggcag
ggcgcggacagcccgcccgtgggcatcttcgtcatcgagcgcgagacggggtggctggag
gtgaccgagcagctggaccgggagaagatcgatcgctacaccctcttctcccacgccgtg
tcggccagcgggcagcctgtggaggaccccatggagatcatcatcacggtgatggaccag
aatgacaacaggcccgtgttcatcaaggagctctttgtcggctacatcgaggagaacgca
aagccgggcacctccgtgatgaccgtgagcgccacggacgcggacgacgcggtgaacacc
gacaacggcatcgtcagctactccatcatcagccagcagccgcccagcccgcacccccag
atgttcaccatcgacccggctaagggcatcatcagcgtgctgggcacggggctggaccgg
gagaccactcccaactacacgctgattgtccaggccacggaccaggagggcaagggcctg
tccaacaccgccacggccgtcattgaggtcacggatgccaacgacaacattcccatcttc
gaccctaccatgtacgaaggggtggtggaagagaacaagccgggtatagaggtggccagg
ctgaccgtgacggaccaagacacaccaggctccccagcctggcaagctgtttaccacatc
aagagtggagaccaggatggtgccttcagcattatcaccgaccccagcaccaacaatggc
atcctgaagacagccaaggtgggtcacctcactgtcgatggctccagtgtgggccatgtc
cccaccagccccactgccaccttaacccctctctccaacctgcagggcctggattatgag
accaagaaccgctacgacctggtggtgacagtggagaacaaagtggccctgtccgtgccc
atcacactgtccaccgccagcgtcctggtgaccgtcttggatgtgaatgagccccctgtc
tttgtgccccctatcaagagggaggtggtatcagaggacctaccagtggggcacgaggtt
acatcctacacagcccaagatcctgacagggacgtgaggcagaaaatcacgtaccgcatg
ggcagcgacccggcaggctggctgactattgactccgagaacggcatcatcacggctgcc
cagccactggaccgcgagtcggtgcacgccatcaacagcacatacaaggctatcatcctg
gctgtggacaatgggataccggatgccaccgggacggggacgctgctgctggtcctccag
gatgtgaatgacaacggccccacaccagagccccggtcctttgagatctgcaaccggcag
cctgagcaacagatgctgagcattgttgacaaggacctgcccccacatacctaccccttc
aacgcagcactggagcatggttccagcaacaactggactgttgcgataaggggccaagat
gagctggccctaagcctgaaaaaggagctggagccgggcgagtacaacatcttcctgaag
ctgatggacagccagggcaaggcacaggtgacgcaggtcaaagcccaggtgtgtgagtgt
gaagggacagccaagaactgcgagcggaggtcgtacatcgtcggtgggctgggtgtccct
gccatcctgggcatcctggggggcatccttgccctgctgattctgctgctgctgctgctg
ctctttgcccggcgacgcaaagtggagaaggagccgctgctgccacccgaggatgacatg
cgggacaatgtctacaattacgatgaggagggcggcggtgaggaggaccaggactacgac
ctgagccagctgcaccgcggcctggacgcccgtcccgaggtgatccgcaatgatgtggcc
cccccgctgatggccgccccccagtaccggccccggcccgccaaccccgatgagatcgga
aacttcatcgacgagaacctgaaggcggccgacacggaccccacggcccccccctacgac
tcgctgctggtgttcgactacgagggcggcggctcggaggccacctcgctcagctccctc
aactcctccgcctccgaccaggaccaggactacgactacctcaacgagtggggcaaccgc
ttcaagaagctggcggagctctatggcggcggggaggacgacgactag
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